Decadal trends in abundance,size and condition of Antarctic toothfish in McMurdo Sound,Antarctica, 1972–2011     

David G Ainley  Nadav Nur  Joseph T Eastman  Grant Ballard  Claire L Parkinson  Clive W Evans  Arthur L. DeVries 《Fish and Fisheries》2013,14(3):343-363

We report the analyses of a dataset spanning 39 years of near‐annual fishing for Dissostichus mawsoni in McMurdo Sound, Antarctica, 1972–2011. Data on total length, condition and catch per unit effort (CPUE) were derived from the > 5500 fish caught, the large majority of which were measured, tagged and released. Contrary to expectation, the length frequency of the McMurdo Sound catch was dominated by fish in the upper two‐thirds of the overall distribution exhibited in the industrial catch for the Ross Sea shelf. Fish length and condition increased from the early 1970s to the early 1990s and then decreased. Fish length positively correlated with Ross Sea ice extent in early spring, a relationship possibly caused by more ice encouraging larger fish to move farther south over the shelf and into the study area. Fish condition positively correlated with the amount of open water in the Ross Sea during the previous summer (Feb), perhaps reflecting greater availability of prey with the higher productivity that more open water brings. Decreasing fish size corresponds to the onset of the fishery, which targets the large individuals. CPUE was constant through 2001 and then decreased dramatically. We hypothesize that this decrease is related to the industrial fishery, which began in the 1996–97 austral summer, and concentrates effort over the ice‐free Ross Sea continental slope. As a result of limited prey choices and close coupling among mesopredators of the region, Antarctic toothfish included, the fishery appears to be dramatically altering the trophic structure of the Ross Sea.  相似文献   

Phylogenetic analysis of bacterial communities in the shrimp and sea cucumber aquaculture environment in northern China by culturing and PCR–DGGE     

Qiufen Li  Y. Zhang  D. Juck  N. Fortin  Charles W. Greer  Qisheng Tang 《Aquaculture International》2010,18(6):977-990

In this study, we investigated the bacterial communities in the shrimp and sea cucumber culture environment, including shrimp ponds (SP), sea cucumber ponds (SCP), mixed-culture ponds (MCP) and the effluent channel (EC) in Qingdao, China. Bacteria cultivation showed that the counts of heterotrophic, nitrate-reducing and sulfate-reducing bacteria in the sediment of SP were higher than that in the sediment of SCP and MCP, varying between 8.7 × 10⁴ and 1.86 × 10⁶, 2.1 × 10⁴ and 1.1 × 10⁵, and 9.3 × 10¹ and 1.1 × 10⁴ CFU g^?1, respectively. In contrast, the counts of ammonium-oxidizing and nitrifying bacteria in the sediment of SP was lower than that in the sediment of SCP and MCP. Denaturing gradient gel electrophoresis (DGGE) of 16S rDNA gene and dendrogram analyses showed that bacterial diversity in the mixed-culture environment was higher than that in the monocultures. The similarity of bacterial community between EC and SCP or MCP was higher than that between EC and SP. These results indicated that sea cucumber culture played a significant role in influencing the environmental bacterial communities that were composed mainly of Flavobacteriaceae (64.3%), Bacteriodetes (21%) and delta proteobacteria (14.7%), including the genera of Croceimarina, Lutibacter, Psychroserpens and so on. The results explained the benefit of sea cucumber culture in shrimp ponds at the level of microbial ecology.  相似文献   

Methods of assessing extinction risk in marine fishes   总被引：1，自引：0，他引：1  

Nicholas K Dulvy  Jim R Ellis  Nicholas B Goodwin  Alastair Grant  John D Reynolds  & Simon Jennings 《Fish and Fisheries》2004,5(3):255-276

The decline and disappearance of species from large parts of their former geographical range has become an important issue in fisheries ecology. There is a need to identify which species are at risk of extinction. The available approaches have been subject to considerable debate – particularly when applied to commercially exploited species. Here we have compiled methods that have been used or may be used for assessing threat status of marine organisms. We organize the methods according to the availability of data on the natural history, ecology and population biology of species. There are three general approaches to inferring or assessing extinction risk: (i) correlative approaches based on knowledge of life histories and ecology; (ii) time‐series approaches that examine changes in abundance; and (iii) demographic approaches based on age‐ or stage‐based schedules of vital rates and fisheries reference points. Many methods are well suited to species that are highly catchable and/or have relatively low productivity, but theory is less well developed for assessing extinction risk in species exhibiting narrow geographical distributions or ecological specialization. There is considerable variation in both definitions of extinction risk and the precision and defensibility of the available risk assessment methods, so we suggest a two‐tiered approach for defining and assessing extinction risk. First, simple methods requiring a few easily estimated parameters are used to triage or rapidly assess large numbers of populations and species to identify potentially vulnerable populations or species. Second, the populations and species identified as vulnerable by this process can then be subject to more detailed and rigorous population analysis explicitly considering sources of error and uncertainty.  相似文献   

The purification and partial characterization of carp,Cyprinus carpio,vitellogenin   总被引：2，自引：0，他引：2  

Charles R. Tyler  John P. Sumpter 《Fish physiology and biochemistry》1990,8(2):111-120

A procedure is described for the isolation of intact vitellogenin (c-VTG) from the carp, Cyprinus carpio. VTG was induced in juvenile females using oestradiol-17β and purified from the plasma using a combination of gel-filtration chromatography on Sepharose 6B and ion exchange chromatography on DEAE-cellulose. Purification procedures were conducted at low temperatures (below 9°C) in the presence of the proteolytic enzyme inhibitor aprotinin to prevent degradation. Intact c-VTG had an apparent molecular mass of 390,000 Daltons, but when extracted from plasma in the absence of aprotinin it underwent proteolysis into at least 2 protein fragments (apparent molecular masses of 230,000 and 96,000 Daltons), showing an instability of the native dimer. An amino acid analysis of c-VTG showed that its composition was almost identical to goldfish VTG, a species closely allied to the true carps and also similar to other oviparous vertebrate VTGs. Collectively, these data indicate that using these purification procedures VTG from carp, and probably other teleost species, can be isolated in an intact, highly purified form.  相似文献   

Confronting collinearity: comparing methods for disentangling the effects of habitat loss and fragmentation   总被引：1，自引：1，他引：0  

Adam C. Smith  Nicola Koper  Charles M. Francis  Lenore Fahrig 《Landscape Ecology》2009,24(10):1271-1285

Estimating the relative importance of habitat loss and fragmentation is necessary to estimate the potential benefits of specific management actions and to ensure that limited conservation resources are used efficiently. However, estimating relative effects is complicated because the two processes are highly correlated. Previous studies have used a wide variety of statistical methods to separate their effects and we speculated that the published results may have been influenced by the methods used. We used simulations to determine whether, under identical conditions, the following 7 methods generate different estimates of relative importance for realistically correlated landscape predictors: residual regression, model or variable selection, averaged coefficients from all supported models, summed Akaike weights, classical variance partitioning, hierarchical variance partitioning, and a multiple regression model with no adjustments for collinearity. We found that different methods generated different rankings of the predictors and that some metrics were strongly biased. Residual regression and variance partitioning were highly biased by correlations among predictors and the bias depended on the direction of a predictor’s effect (positive vs. negative). Our results suggest that many efforts to deal with the correlation between amount and fragmentation may have done more harm than good. If confounding effects are controlled and adequate thought is given to the ecological mechanisms behind modeled predictors, then standardized partial regression coefficients are unbiased estimates of the relative importance of amount and fragmentation, even when predictors are highly correlated.  相似文献   

Predicting the age of fish using general and generalized linear models of biometric data: A case study of two estuarine finfish from New South Wales, Australia     

Faith A. Ochwada  James P. Scandol  Charles A. Gray 《Fisheries Research》2008,90(1-3):187-197

Direct ageing of fish can be a laborious and expensive task when age estimates from a large population are required, and often involves a degree of subjectivity. This study examined the application of general and generalized linear models that predict the age of fish from a range of efficiently and objectively measured covariates. The data sampled were from yellowfin bream (Acanthopagrus australis (Sparidae) (Owen, 1853)) and sand whiting (Sillago ciliata (Sillaginidae) Cuvier, 1829) populations from New South Wales, Australia. The covariates evaluated in the models were fish length, otolith weight, sex and location (the estuary from which the fish were sampled). Akaike Information Criteria were used for model selection and residual plots of the final models revealed a satisfactory fit to the observations. The best fitting model for each species included all covariates. An additional investigation considered whether general and generalized linear models that predict age from two different categories of biometric information outperform age-length keys with respect to subsequent estimates of total mortality from catch-curve analysis. The two categories of biometric information differed in the ease and cost with which the information could be collected. The first category only included fish length and location as covariates, whilst the second category also included otolith weight and sex. It was found that traditional age-length keys outperformed the predictive models that estimated age from only fish length and location, because the results from the models were prone to significant bias. However, when otolith weight and sex were added as covariates to the predictive models, some of them, including a generalized linear model with a Poisson-distributed response variable, performed similarly to the age-length key. Given that otolith weight and the sex of fish are cheaper to quantify than age from a sectioned otolith in many situations, general or generalized linear models may represent a cheaper and faster method of estimating mortality compared to age-length keys. Such models can also easily incorporate the influence of spatial, temporal and demographic variation.  相似文献   

Control of insect pests using trunk injection in a newly established apple orchard     

Charles C. Coslor  Christine Vandervoort  John C. Wise 《International Journal of Fruit Science》2019,19(2):151-164

We evaluated the potential for using preplant trunk injections of emamectin benzoate in nonbearing apple trees. Trees were evaluated for pest injury and emamectin residues throughout the planting season and into the following year. Injections into the trunk best delivered emamectin benzoate to the canopy compared with injections into the taproot, and the higher rate reduced insect pests more than the lower rate. In the following year, differences in insect control between trunk and root injections were less pronounced, but the higher rate of emamectin benzoate persisted longer and better reduced pests relative to the other treatments.  相似文献   

Animal movement varies with resource availability,landscape configuration and body size: a conceptual model and empirical example     

Doherty  Tim S.  Fist  Charles N.  Driscoll  Don A. 《Landscape Ecology》2019,34(3):603-614

Landscape Ecology - Animals must move to find food, shelter and mates, and escape predation and competition. Changes in landscape configuration and resource availability can disrupt natural...  相似文献   

Determining resistance to <Emphasis Type="Italic">Fusarium verticillioides</Emphasis> and fumonisin accumulation in African maize inbred lines resistant to <Emphasis Type="Italic">Aspergillus flavus</Emphasis> and aflatoxins     

Lindy Joy Rose  Sheila Okoth  Ilze Beukes  Abigael Ouko  Marili Mouton  Bradley Charles Flett  Dan Makumbi  Altus Viljoen 《Euphytica》2017,213(4):93

Fusarium verticillioides and Aspergillus flavus cause Fusarium ear rot (FER) and Aspergillus ear rot (AER) of maize, respectively. Both pathogens are of concern to producers as they reduce grain yield and affect quality. F. verticillioides and A. flavus also contaminate maize grain with the mycotoxins fumonisins and aflatoxins, respectively, which has been associated with mycotoxicosis in humans and animals. The occurrence of common resistance mechanisms to FER and AER has been reported. Hence, ten Kenyan inbred lines resistant to AER and aflatoxin accumulation were evaluated for resistance to FER, F. verticillioides colonisation and fumonisin accumulation; and compared to nine South African lines resistant to FER and fumonisin accumulation. Field trials were conducted at three localities in South Africa and two localities in Kenya. FER severity was determined by visual assessment, while F. verticillioides colonisation and fumonisin content were quantified by real-time PCR and liquid chromatography tandem mass spectrometry, respectively. Significant genotype x environment interactions was determined at each location (P ≤ 0.05). Kenyan inbred CML495 was most resistant to FER and F. verticillioides colonisation, and accumulated the lowest concentration of fumonisins across localities. It was, however, not significantly more resistant than Kenyan lines CML264 and CKL05015, and the South African line RO549 W, which also exhibited low FER severity (≤5%), fungal target DNA (≤0.025 ng μL^?1) and fumonisin levels (≤2.5 mg kg^?1). Inbred lines resistant to AER and aflatoxin accumulation appear to be promising sources of resistance to F. verticillioides and fumonisin contamination.  相似文献   

Thermal effects on water retention behaviour of unsaturated collapsible loess     

Cheng  Qing  Zhou  Chao  Ng  Charles Wang Wao  Tang  Chaosheng 《Journal of Soils and Sediments》2020,20(2):756-762

Journal of Soils and Sediments - Temperature has a significant influence on water retention curve (WRC) because temperature affects surface tension of water and volumetric behaviour of soil....  相似文献