A physical map of the 1-gigabase bread wheat chromosome 3B   总被引：2，自引：0，他引：2  

Paux E  Sourdille P  Salse J  Saintenac C  Choulet F  Leroy P  Korol A  Michalak M  Kianian S  Spielmeyer W  Lagudah E  Somers D  Kilian A  Alaux M  Vautrin S  Bergès H  Eversole K  Appels R  Safar J  Simkova H  Dolezel J  Bernard M  Feuillet C 《Science (New York, N.Y.)》2008,322(5898):101-104

As the staple food for 35% of the world's population, wheat is one of the most important crop species. To date, sequence-based tools to accelerate wheat improvement are lacking. As part of the international effort to sequence the 17-billion-base-pair hexaploid bread wheat genome (2n = 6x = 42 chromosomes), we constructed a bacterial artificial chromosome (BAC)-based integrated physical map of the largest chromosome, 3B, that alone is 995 megabases. A chromosome-specific BAC library was used to assemble 82% of the chromosome into 1036 contigs that were anchored with 1443 molecular markers, providing a major resource for genetic and genomic studies. This physical map establishes a template for the remaining wheat chromosomes and demonstrates the feasibility of constructing physical maps in large, complex, polyploid genomes with a chromosome-based approach.  相似文献   

The ecoresponsive genome of Daphnia pulex     

Colbourne JK  Pfrender ME  Gilbert D  Thomas WK  Tucker A  Oakley TH  Tokishita S  Aerts A  Arnold GJ  Basu MK  Bauer DJ  Cáceres CE  Carmel L  Casola C  Choi JH  Detter JC  Dong Q  Dusheyko S  Eads BD  Fröhlich T  Geiler-Samerotte KA  Gerlach D  Hatcher P  Jogdeo S  Krijgsveld J  Kriventseva EV  Kültz D  Laforsch C  Lindquist E  Lopez J  Manak JR  Muller J  Pangilinan J  Patwardhan RP  Pitluck S  Pritham EJ  Rechtsteiner A  Rho M  Rogozin IB  Sakarya O  Salamov A  Schaack S  Shapiro H  Shiga Y  Skalitzky C  Smith Z  Souvorov A  Sung W 《Science (New York, N.Y.)》2011,331(6017):555-561

We describe the draft genome of the microcrustacean Daphnia pulex, which is only 200 megabases and contains at least 30,907 genes. The high gene count is a consequence of an elevated rate of gene duplication resulting in tandem gene clusters. More than a third of Daphnia's genes have no detectable homologs in any other available proteome, and the most amplified gene families are specific to the Daphnia lineage. The coexpansion of gene families interacting within metabolic pathways suggests that the maintenance of duplicated genes is not random, and the analysis of gene expression under different environmental conditions reveals that numerous paralogs acquire divergent expression patterns soon after duplication. Daphnia-specific genes, including many additional loci within sequenced regions that are otherwise devoid of annotations, are the most responsive genes to ecological challenges.  相似文献   

In vitro digestibility of α-casozepine, a benzodiazepine-like peptide from bovine casein, and biological activity of its main proteolytic fragment     

Cakir-Kiefer C  Le Roux Y  Balandras F  Trabalon M  Dary A  Laurent F  Gaillard JL  Miclo L 《Journal of agricultural and food chemistry》2011,59(9):4464-4472

α-Casozepine is a peptide, corresponding to the sequence 91-100 of the bovine α(s1)-casein, displaying anxiolytic activity in the rat. The α(s1)-casein tryptic hydrolysate containing this peptide decreases stress effects after oral administration in various species including man. Therefore, the stability of this peptide toward gastric and pancreatic proteases has been assessed by using pepsin, chymotrypsin/trypsin, Corolase PP, pepsin followed by chymotrypsin/trypsin or pepsin followed by Corolase PP. α-Casozepine was slowly degraded by chymotrypsin, much more sensitive to pepsin and Corolase PP but not completely destroyed after 4 h kinetics. The bonds in the region 91 to 95 of the α-casozepine were totally resistant to hydrolysis by all studied proteases. Surprisingly, a fragment, corresponding to the sequence 91-97 and found in all the hydrolysis media in significant amount, possessed an anxiolytic activity in three behavioral tests measuring this parameter. This peptide could participate in the in vivo activity of α-casozepine.  相似文献   

Intracranial meningioma causing partial amaurosis in a cat     

Goulle F  Meige F  Durieux F  Malet C  Toulza O  Isard PF  Peiffer RL  Dulaurent T 《Veterinary ophthalmology》2011,14(Z1):93-98

Objective To describe a case of intracranial meningioma causing visual impairment in a cat, successfully treated by surgery. Procedures An adult neutered male domestic cat was referred with a 10‐month history of progressive visual impairment and altered behavior. Investigations included physical, ophthalmologic and neurological examinations as well as hematology, serum biochemistry and CT scan of the head. Results The menace response was absent in the left eye and decreased in the right eye. Electroretinograms were normal on both eyes, as was ophthalmic examination, ruling out an ocular cause and allowing a presumptive diagnosis of partial amaurosis due to a post‐retinal lesion. CT scan demonstrated a large sessile extra axial mass along the right parietal bone and thickening of the adjacent bone. Cerebrospinal fluid was not collected because high intracranial pressure represented a risk for brain herniation. A right rostrotentorial craniectomy was performed to remove the tumor. Ten days after surgery, vision was improved, neurological examination was normal and normal behavior was restored. Ten months after surgery, ophthalmological examination showed no visual deficit and CT scan did not reveal any sign of recurrence. Conclusion Advanced imaging techniques allow veterinarians to detect early cerebral diseases and to provide specific treatment when it is possible. In cases of feline amaurosis due to intracranial meningioma, the vital prognosis is good while the visual prognosis is more uncertain, but recovery of normal vision and normal behavior is possible as demonstrated in the present case.  相似文献   

Colluvisols under cultivation in Schleswig-Holstein. 2. Carbon distribution and soil organic matter composition     

Lothar Beyer  Rüdiger Fründ  Uwe Schleuß  Christine Wachendorf 《植物养料与土壤学杂志》1993,156(3):213-217

Soils under intensive cultivation have altered due to water erosion. This study was conducted to determine whether soil organic matter (SOM) composition of the colluvial source (Ap horizons) differs from the colluvial sink (M horizons). The SOM of a sandy Catena with erodic Cambisols and colluvic soils (Colluvisols) in Schleswig-Holstein, Northwest Germany, was investigated. A wet chemical analysis was combined with CPMAS ¹³C-NMR spectroscopy. In one case a significant correlation between the SOM composition of the Ap horizon of the erodic Cambisol and the M horizon of the Colluvisol was high (r² = 0.904^-), whereas the correlation for the other set was much weaker (r² = 0.640*). Two possible paths of pedogenesis are discussed. About 70% of the SOM of the colluvial source is decomposed during translocation or after deposition. A selective preservation or new formation of humins in the M material is probable. These humins contain, obviously, large amounts of polysaccharides, which were not detected by the wet chemical analysis. Further investigations of colluvic and erodic soils are necessary in order to specify the SOM quality and its possible modification due to soil translocation and accumulation.  相似文献   

ELLA: A Rapid Technique to Estimate Chromium Stress-Induced Modification of E. coli EI19     

Omar Hamdouni Alami  Lamyae Khamlichi  Mohammed El Hassouni  Jamal El Yamani  Frédéric Barras 《Water, air, and soil pollution》2002,134(1-4):129-136

An enzyme-linked lectin assay (ELLA) was used to differentiatebetween chromium-stressed and unstressed cells of Escherichia coli EI19. The assay is a modification of the enzyme-linked immunosorbent assay (ELISA) that uses Concanavalin A (Con A) conjugated with peroxidase to detect the carbohydrate moiety of the cell envelope glycoconjugates. The ELLA test shows that Con A binds to stressed bacteria much moreefficiently than it does to unstressed bacteria. Effects of heat,phenol and papain treatments on Con A-binding to chromium-stressed bacteria were also studied. Con A-binding to bacteria was sensitive to heat and phenol treatment, but not to treatment with papain. A potential analytical method for estimating the concentration of certain environmental pollutants is outlined.  相似文献   

Effects of Foliar Fertilization on Incidence of Berry Shrivel and Bunch Stem Necrosis in Vitis vinifera L. CVS ‘Pinot Blanc’ and ‘Zweigelt’     

Kristina Bachteler  Monika Riedel  Nikolaus Merkt  Wolfgang Schies  Jutta Fröhlin  Jens Wünsche 《Journal of plant nutrition》2015,38(6):839-853

Berry shrivel and bunch stem necrosis are the economically most important physiological disorders of grapevine. The nutritional status of the plant is considered as one of the main elicitors for the occurrence of these disorders. For foliar fertilization trials, two vineyards that had previously been affected by both diseases were selected in Southwest Germany, one with the variety ‘Zweigelt’ and one with Pinot Blanc. By the use of potassium, magnesium, and calcium foliar fertilizers, a rapid increase of different nutrients in the plants should be caused and the effects on the diseases observed. In 2010, no significant differences in the fertilization treatments were found for both varieties. In ‘Pinot Blanc’, significantly more berries were affected by berry shrivel in 2011 in plots treated with calcium fertilizer compared to those treated with potassium and magnesium. Plots with magnesium fertilizer showed significantly less berries affected by berry shrivel than the untreated control.  相似文献   

Tylosin detection in animal feed by liquid chromatography-tandem mass spectrometry with enzymatic hydrolysis of the tylosin urea adduct     

Van Poucke C  Dumoulin F  De Keyser K  Elliott C  Van Peteghem C 《Journal of agricultural and food chemistry》2004,52(10):2803-2806

When the use of tylosin as a feed additive was forbidden by Council Regulation 2821/98, the necessity of a chemical confirmation method for the monitoring of the ban was created. Recently a method was developed for the detection of tylosin in animal feed by means of LC-MS/MS. During the validation high deviating values for the decision limit, detection capability, and repeatability for tylosin in cattle feed were observed, and the presence of urea and the formation of a tylosin urea adduct (TUA) were suggested as possible explanations. In this study two hydrolysis approaches for the TUA adduct were compared, namely, a chemical hydrolysis and an enzymatic hydrolysis with urease. The latter yielded a more complete hydrolysis of urea and was used for further validation. The recovery increased by approximately 15-25% depending on the amount of urea present in the feed (0.5-2%). The decision limit and detection capability were hardly influenced by the enzymatic hydrolysis.  相似文献   

Nutritional evaluation of pea (Pisum sativum L.) protein diets after mild hydrothermal treatment and with and without added phytase     

Urbano G  Aranda P  Gómez-Villalva E  Frejnagel S  Porres JM  Frías J  Vidal-Valverde C  López-Jurado M 《Journal of agricultural and food chemistry》2003,51(8):2415-2420

The effect of mild hydrothermal treatment and the addition of phytase under optimal conditions (pH 5.5, 37 degrees C) on the nutritive utilization of the protein of pea (Pisum sativum L.) flour was studied in growing rats by examining the chemical and biological balance. Mild hydrothermal treatment produced reductions of 83, 78, and 72%, respectively, in the levels of alpha-galactosides, phytic acid, and trypsin inhibitors and also produced a significant increase in the digestive utilization of protein. The additional fall in the levels of phytic acid caused by the addition of phytase did not lead to a subsequent improvement in the digestive utilization of protein. The mild hydrothermal treatment of pea flour produced a significant increase in the metabolic utilization of protein and carbohydrates, which was reflected in the protein efficiency ratio and food transformation growth indices. These effects were not observed in the phytase-supplemented pea diet.  相似文献   

Management of human health risk in the context of kitchen gardens polluted by lead and cadmium near a lead recycling company     

Stéphane Mombo  Yann Foucault  Frédéric Deola  Irène Gaillard  Sylvaine Goix  Muhammad Shahid  Eva Schreck  Antoine Pierart  Camille Dumat 《Journal of Soils and Sediments》2016,16(4):1214-1224

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