Comparison of serologic tests for detection of Brucella infections in cattle and water buffalo (Bubalus bubalis)     

Fosgate GT  Adesiyun AA  Hird DW  Johnson WO  Hietala SK  Schurig GG  Ryan J 《American journal of veterinary research》2002,63(11):1598-1605

OBJECTIVE: To estimate sensitivity and specificity of 4 commonly used brucellosis screening tests in cattle and domestic water buffalo of Trinidad, and to compare test parameter estimates between cattle and water buffalo. ANIMALS: 391 cattle and 381 water buffalo. PROCEDURE: 4 Brucella-infected herds (2 cattle and 2 water buffalo) and 4 herds (2 of each species) considered to be brucellosis-free were selected. A minimum of 100 animals, or all animals > 1 year of age, were tested from each herd. Serum samples were evaluated for Brucella-specific antibodies by use of standard plate agglutination test (SPAT), card test (CT), buffered plate agglutination test (BPAT), and standard tube agglutination test (STAT). A Bayesian approach was used to estimate sensitivity and specificity of diagnostic tests without the use of a gold standard, assuming conditional independence of tests. RESULTS: Sensitivity and specificity estimates in cattle, respectively, were SPAT, 66.7 and 98.9; CT, 72.7 and 99.6; BPAT, 88.1 and 98.1; and STAT, 80.2 and 99.3. Corresponding test estimates in water buffalo, respectively, were SPAT, 51.4 and 99.3; CT, 90.4 and 99.4; BPAT, 96.3 and 90.7; and STAT, 75.0 and 98.8. Sensitivity of the CT and specificity of the BPAT were different between cattle and water buffalo with at least 95% probability. CONCLUSIONS AND CLINICAL RELEVANCE: Brucellosis serologic test performance varied by species tested, but BPAT had the highest sensitivity for screening cattle and water buffalo. Sensitivity and specificity of more than 2 screening tests can be estimated simultaneously without a gold standard by use of Bayesian techniques.  相似文献   

Mediastinal mass in a dog with syncope and abdominal distension     

Zimmerman KL  Rossmeisl JH  Thorn CE  Saunders GK 《Veterinary clinical pathology / American Society for Veterinary Clinical Pathology》2000,29(1):19-21

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A comparison of the cytologic and histologic features of meningiomas in four dogs     

Zimmerman KL  Bender HS  Boon GD  Prater MR  Thorn CE  Prater D  Robertson JL  Saunders GK  Sponenberg DP  Inzana KD  Lanz OI  Wright E 《Veterinary clinical pathology / American Society for Veterinary Clinical Pathology》2000,29(1):29-34

Abstract: The cytologic and histologic features of 2 intracranial and 2 spinal (extramedullary cervical) canine meningiomas were compared. Cerebrospinal fluid analysis in 2 cases revealed mild, mixed cell pleocytosis, primarily composed of small lymphocytes and monocytoid cells, with a moderate increase in total protein concentration. Cytologic features suggestive of meningioma included cells with both epithelial and mes-enchymal characteristics and a tendency towards cell clustering. Tumor location also was useful in making a diagnosis. The 4 meningiomas differed histologically from one another, and included angioblastic, psam-momatous, meningotheliomatous, and microcystic anaplastic types, which conformed to a classification scheme for human meningiomas. The classification scheme could not be applied to cytologic specimens.  相似文献   

Comparison of the Sensitivity of Landscape-fire-succession Models to Variation in Terrain, Fuel Pattern, Climate and Weather   总被引：1，自引：0，他引：1  

Geoffrey J. Cary  Robert E. Keane  Robert H. Gardner  Sandra Lavorel  Mike D. Flannigan  Ian D. Davies  Chao Li  James M. Lenihan  T. Scott Rupp  Florent Mouillot 《Landscape Ecology》2006,21(1):121-137

The purpose of this study was to compare the sensitivity of modelled area burned to environmental factors across a range of independently-developed landscape-fire-succession models. The sensitivity of area burned to variation in four factors, namely terrain (flat, undulating and mountainous), fuel pattern (finely and coarsely clumped), climate (observed, warmer & wetter, and warmer & drier) and weather (year-to-year variability) was determined for four existing landscape-fire-succession models (EMBYR, FIRESCAPE, LANDSUM and SEM-LAND) and a new model implemented in the LAMOS modelling shell (LAMOS(DS)). Sensitivity was measured as the variance in area burned explained by each of the four factors, and all of the interactions amongst them, in a standard generalised linear modelling analysis. Modelled area burned was most sensitive to climate and variation in weather, with four models sensitive to each of these factors and three models sensitive to their interaction. Models generally exhibited a trend of increasing area burned from observed, through warmer and wetter, to warmer and drier climates with a 23-fold increase in area burned, on average, from the observed to the warmer, drier climate. Area burned was sensitive to terrain for FIRESCAPE and fuel pattern for EMBYR. These results demonstrate that the models are generally more sensitive to variation in climate and weather as compared with terrain complexity and fuel pattern, although the sensitivity to these latter factors in a small number of models demonstrates the importance of representing key processes. The models that represented fire ignition and spread in a relatively complex fashion were more sensitive to changes in all four factors because they explicitly simulate the processes that link these factors to area burned. The US Government's and the Canadian Government's right to retain a non-exclusive, royalty-free license is acknowledged  相似文献   

Use of Degenerate Primers in a RT-PCR Assay for the Identification and Analysis of Some Filamentous Viruses, with Special Reference to Clostero- and Vitiviruses of the Grapevine     

Pasquale Saldarelli  Adib Rowhani  Geoffrey Routh  Angelantonio Minafra  Michele Digiaro 《European journal of plant pathology / European Foundation for Plant Pathology》1998,104(9):945-950

RT-PCR with degenerate primers was used for the screening of the genome of some members of the Closterovirus, Vitivirus and Trichovirus genera. Two sets of primers, targeted to conserved sequences of the heat shock protein 70 homologue of closteroviruses or to the RNA dependent RNA polymerase genes of tricho- and vitiviruses, amplified the expected fragments from total RNA extracts or double-stranded RNAs of infected plants. Amplified cDNAs were cloned, sequenced and phylogenetically analyzed. Results support the allocation of grapevine viruses A, B, D and heracleum latent virus (HLV) in the genus Vitivirus, whereas, the detection of a HSP70 homologue in grapevine leafroll-associated viruses agrees with their assignment in the genus Closterovirus. The use of degenerate primers for the identification of grapevine viruses belonging to Vitivirus and Closterovirus genera is envisaged.  相似文献   

The impact of thematic resolution on the patch-mosaic model of natural landscapes   总被引：1，自引：1，他引：0  

Guillermo Castilla  Kerry Larkin  Julia Linke  Geoffrey J. Hay 《Landscape Ecology》2009,24(1):15-23

We argue that thematic resolution, i.e., the level of categorical detail of a thematic map expressed by the number of classes included in the map legend, is an inherent component of the scale at which a landscape is analyzed. Changing the number of classes can change the configuration of the patch mosaic as much as changing the grain does. We address recent calls in this and other journals to deepen research in this topic. In particular, we report how thematic resolution affects the patchiness of mosaics representing natural landscapes, which have seldom been studied in this respect. We selected seven 50 × 50 km landscapes within national parks, each representative of a world biome. We applied an object-based unsupervised classification to Landsat TM imagery of these landscapes using increasing numbers of classes, between 2 and 50, and derived curves of mean patch size and patch density for each site. Our results are consistent with previous findings in that the patchiness of output mosaics increases monotonically with increasing thematic resolution, with a higher rate of increase up to eight classes that declines until it becomes roughly constant for more than 16 classes. However, this constant rate of increase is still considerable, meaning that, at least for natural landscapes, there is no threshold beyond which the patch-mosaic model is independent of the conceptual filter applied. This dependence on human fiat calls for re-thinking the patch-mosaic paradigm.  相似文献   

Canopy light transmittance in Douglas-fir--western hemlock stands     

Parker GG  Davis MM  Chapotin SM 《Tree physiology》2002,22(2-3):147-157

We measured vertical and horizontal variation in canopy transmittance of photosynthetically active radiation in five Pseudotsuga menziesii (Mirb.) Franco-Tsuga heterophylla (Raf.) Sarg. (Douglas-fir-western hemlock) stands in the central Cascades of southern Washington to determine how stand structure and age affect the forest light environment. The shape of the mean transmittance profile was related to stand height, but height of mean maximum transmittance was progressively lower than maximum tree height in older stands. The vertical rate of attenuation declined with stand age in both the overstory and understory. A classification of vertical light zones based on the mean and variance of transmittance showed a progressive widening of the bright (low variance and high mean) and transition (high variance and rapid vertical change) zones in older stands, whereas the dim zone (low variance and mean) narrowed. The zone of maximum canopy surface area in height profiles, estimated by inversion of transmittance profiles, changed from relatively high in the canopy in most young stands ("top-heavy") to lower in the canopy in older stands ("bottom-heavy"). In the understory, all stands had similar mean transmittances, but the spatial scale of variation increased with stand age and increasing crown size. The angular distribution of openness was similar in all stands, though the older stands were less open at all angles than the younger stands. Understory openness was generally unrelated to transmittance in the canopy above. Whole-canopy leaf area indices, estimated using three methods of inverting light measurements, showed little correspondence across methods. The observed patterns in light environment are consistent with structural changes occurring during stand development, particularly the diversification of crowns, the creation of openings of various sizes and the elaboration of the outer canopy surface. The ensemble of measurements has potential use in distinguishing forests of differing ages that have similar stature.  相似文献   

Fibril angle variability in earlywood of Norway spruce using soft rot cavities and polarization confocal microscopy   总被引：4，自引：0，他引：4  

Anna Bergander  Jonas Br?ndstr?m  Geoffrey Daniel  Lennart Sahnen 《Journal of Wood Science》2002,48(4):255-263

The main purpose of this study was to investigate the variability of the fibril angle of tracheids in earlywood of Norway spruce (Picea abies L. Karst.). Polarization confocal microscopy was chosen and compared with the method utilizing the orientation of soft rot cavities. There was a significant correlation between the soft rot and polarization confocal microscopy methods, which showed the same trend of high fibril angles in the first part of the earlywood followed by a decrease toward the end of earlywood. This declining trend was less pronounced in annual rings containing compression wood. Moreover, large variations in fibril angle occurred between neighboring tracheids. The investigation also emphasized the differences between X-ray diffraction and microscopic methods, as the large variation seen by the latter methods is not seen by the X-ray diffraction approach because of its large area of measurement. No correlation was found between fiber morphology (i.e., average length, width, density) and the average fibril angle in the investigated annual rings.  相似文献   

Three-dimensional imaging of a sawn surface: a comparison of confocal microscopy,scanning electron microscopy,and light microscopy combined with serial sectioning     

Lloyd Donaldson  Stig Bardage  Geoffrey Daniel 《Wood Science and Technology》2007,41(7):551-564

The three-dimensional structure of a transverse sawn wood surface was investigated using several methods, to compare techniques, and to study the types of deformation in tracheids at the saw cut. A sample of spruce sapwood was cut with a fret saw across the grain. The transverse sawn surface was imaged by confocal microscopy, field emission scanning electron microscopy (FESEM), and by light microscopy combined with serial sectioning and three-dimensional (3D) reconstruction. Both confocal microscopy and FESEM were restricted to visualising the cut surface of the wood. However, serial sectioning was able to reveal the internal structure below the cut surface providing more information on the types of cell deformation present. The wood structure was deformed to depths of more than 600 μm below the surface with twisting, crushing and tearing deformations. Near the outer surface, gaps were formed between groups of tracheids where the cell walls had been torn away to form saw dust. The deformation tended to form groups of tracheids that were twisted relative to each other. Latewood was less distorted, forming a dense solid surface compared to the highly fibrous earlywood.  相似文献   

Sulfate--a candidate for the missing essential factor that is required for the formation of protein haze in white wine     

Pocock KF  Alexander GM  Hayasaka Y  Jones PR  Waters EJ 《Journal of agricultural and food chemistry》2007,55(5):1799-1807

Protein haze formation in white wine is dependent on the presence of both wine protein and other unknown wine components, termed factor(s) X. The ability to reconstitute protein haze upon heating artificial model wine solutions (500 mg/L thaumatin, 12% ethanol, 4 g/L tartaric acid) to which candidate components were added was employed to identify factor(s) X. No protein haze was formed in the absence of additives. The individual or combined addition of caffeic acid, caftaric acid, epicatechin, epigallocatechin-O-gallate, gallic acid, or ferulic acid at typical white wine concentrations did not generate protein haze. However, PVPP fining of commercial wines resulted in a reduction in protein haze, suggesting that phenolic compounds may play a modulating role in haze formation. To elucidate the nature of the unknown factor(s) wine was fractionated and fractions were back-added to model wine and tested for their essentiality. Wine fractions were generated by ultrafiltration, reverse-phase chromatography, and mixed-mode anion-exchange and reverse-phase chromatography. The only purified fraction containing the essential component(s) was free of phenolic compounds, and analysis by mass spectrometry identified sulfate anion as the dominant component. Reconstitution with KHSO4 using either commercially available thaumatin or wine proteins confirmed the role of sulfate in wine protein haze formation. The two main wine proteins, thaumatin-like protein and chitinase, differed in their haze response in model wines containing sulfate. Other common wine anions, acetate, chloride, citrate, phosphate, and tartrate, and wine cations, Fe(2+/3+) and Cu(+/2+), when added at typical white wine concentrations were not found to be essential for protein haze formation.  相似文献