Classification of cassava into ‘bitter’ and ‘cool’ in Malawi: From farmers' perception to characterisation by molecular markers     

Jonathan Mkumbira  Linley Chiwona-Karltun  Ulf Lagercrantz  Nzola Meso Mahungu  John Saka  Albert Mhone  Mpoko Bokanga  Leon Brimer  Urban Gullberg  Hans Rosling 《Euphytica》2003,132(1):7-22

Cassava roots, a major food in Africa, contain cyanogenic glucosides that may cause toxic effects. Malawian women farmers considered fields of seemingly similar cassava plants to be mixes of both ‘cool’ and ‘bitter’ cultivars. They regard roots from ‘cool’ cultivars as non-toxic. Roots of ‘bitter’ were considered to require extensive traditional processing done by women to be safe for consumption. But curiously, these women farmers preferred ‘bitter’ cultivars since toxicity confers protection against theft, which was a serious threat to the food security of their families. We studied how well these farmers comprehend the effects of genetic variations in cassava when dealing with cyanogenesis in this complex system. Using molecular markers we show that most plants farmers identified as belonging to a particular named cultivar had a genotype typical of that cultivar. Farmers' ethno-classification into ‘cool’ and ‘bitter’ cultivars corresponded to a genetic sub-division of the typical genotypes of the most common cultivars, with four-fold higher cyanogenic glucoside levels in the bitter cultivars. Examining morphology, farmers distinguished genotypes better than did the investigators when using a standard botanical key. Undoubtedly, these women farmers grasp sufficiently the genetic diversity of cassava with regard to cyanogenesis to simultaneously benefit from it and avoid its dangers. Consequently, acyanogenic cassava – the breeding of which is an announced good of some cassava genetic improvement programmes – is not a priority to these farmers. Advances in molecular genetics can help improve food supply in Africa by rapid micropropagation, marker assisted breeding and introduction of transgenic varieties, but can also help to elucidate tropical small-scale farmers' needs and skills. This revised version was published online in August 2006 with corrections to the Cover Date.  相似文献   

A geographical approach to identify phosphorus-efficient genotypes among landraces and wild ancestors of common bean     

Stephen Beebe  Jonathan Lynch  Nicholas Galwey  Joseph Tohme  Ivan Ochoa 《Euphytica》1997,95(3):325-338

Cultivars of common bean (Phaseolus vulgaris L.) capable of yielding well at low levels of native or added phosphorus (P) are highly desirable in many tropical production systems. The objective of the present study was to identify geographical regions which might be sources of such genotypes. A total of 364 landraces, cultivars and wild genotypes, drawn from a broad geographic range, were divided on the basis of growth habit into four field trials, each comprising two levels of P, stressed and unstressed, on an infertile Andosol in Popayan, Colombia. The regression relationship between grain yield per plant in the presence and in the absence of stress was determined, and each genotype's deviation from this relationship was used as a measure of P-efficiency. There was highly significant variation in efficiency among genotypes in all growth habits, and in climbing beans there were consistent regional differences, superior genotypes being identified with greater frequency among those from Bolivia, West Mexico and South Mexico-West Guatemala. The latter region was promising for prostrate bush genotypes also. Wild beans in general performed relatively poorly; it appears that P-efficiency traits in P. vulgaris have been acquired during or after domestication. These results confirm that genetic differences in P-efficiency exist among common bean genotypes and suggest that these are related to geographic origin. Furthermore, the use of a representative sample of germplasm can help to identify segments of the gene bank that are especially promising as sources of desirable traits. This revised version was published online in July 2006 with corrections to the Cover Date.  相似文献   

Effects of xylanase treatments on gelling and water-uptaking properties of psyllium     

Yu LL  Perret J 《Journal of agricultural and food chemistry》2003,51(2):492-495

The effects of a commercial food-grade xylanase on the physicochemical properties of psyllium were evaluated. The enzymatic reactions were conducted in solid state at ambient temperature. The enzyme-treated psyllium preparations were analyzed and compared with the starting psyllium for their water-uptake properties, gelling capacities, soluble and insoluble fiber contents, and surface structures. The solid-state xylanase treatment significantly reduced both water-uptake and gelling capacities of psyllium (p < 0.01), with a slight decrease of soluble fiber content, whereas no effect on insoluble fiber content was observed. The xylanase treatment also resulted in a smoother surface structure of psyllium particles. In addition, no special equipment and operation were required to conduct the enzymatic reaction, which generated no waste. These data indicated a potential to improve the physicochemical properties of psyllium by use of the solid-state xylanase reactions to promote the utilization of psyllium fiber in functional foods for promoting human health.  相似文献   

Influence of a riparian wetland on nitrate and herbicides exported from an agricultural field     

Angier JT  McCarty GW  Rice CP  Bialek K 《Journal of agricultural and food chemistry》2002,50(15):4424-4429

Agrochemicals are a major source of nonpoint pollution. Forested corridors along stream channels (riparian zones) are thought to be potential sites for removal of agricultural contaminants from ground and surface waters. First-order riparian wetlands are reputed to be especially effective at groundwater remediation. The study site is a fairly typical (for eastern Maryland) small, first-order stream in an agricultural watershed. Preferential flow supplies most of the stream water within the riparian headwater wetland. This upstream area also contains the highest average stream N and pesticide loads in the entire first-order riparian system. Zones of active groundwater emergence onto the surface display high concentrations of nitrate throughout the soil profile and in the exfiltrating water, whereas inactive areas (where there is no visible upwelling) show rapid attenuation of nitrate with decreasing depths. Atrazine degradation products appear to penetrate more readily through the most active upwelling zones, and there is a correlation between zones of high nitrate and high atrazine metabolite levels. Deethylatrazine/atrazine ratios (DAR) seem to indicate that stream flow is dominated by ground water and that much of the ground water may have reached the stream via preferential flow. Remediative processes appear to be very complex, heterogeneous, and variable in these systems, so additional research is needed before effective formulation and application of riparian zone initiatives and guidelines can be accomplished.  相似文献   

Antioxidant properties of bran extracts from "Akron" wheat grown at different locations   总被引：3，自引：0，他引：3  

Yu L  Perret J  Harris M  Wilson J  Haley S 《Journal of agricultural and food chemistry》2003,51(6):1566-1570

Bran extracts of Akron wheat grown at four nonirrigated and one irrigated testing locations were examined and compared for their free radical scavenging properties against the 2,2-diphenyl-1-picrylhydrazyl radical (DPPH(*)) and the radical cation ABTS(*)(+), chelating capacities, and total phenolic content (TPC) to determine the potential effects of environmental factors on the antioxidant properties of hard winter wheat. The environmental factors included total solar radiation, average daily solar radiation, and number of hours exceeding 32 degrees C. The results showed that bran samples from different growing locations may significantly differ in their radical scavenging activities against both DPPH(*) and ABTS(*)(+), chelating capacities, and TPC. A significant negative correlation was detected between the chelating activities of the bran samples from the four nonirrigated locations and total solar or daily average solar radiation (r = -0.999 and P = 0.001). These data suggest potential influences of growing conditions on the antioxidant properties of hard winter wheat and the possibility of producing wheat that is strong in a selected antioxidant property by optimizing the growing conditions of a selected wheat variety. More research is required to further investigate the relationship among antioxidant properties and environmental factors using different wheat varieties and larger sample sizes.  相似文献   

A comparison of effects from prescribed fires and wildfires managed for resource objectives in Sequoia and Kings Canyon National Parks     

Jonathan C.B. Nesmith  Anthony C. CaprioAnne H. Pfaff  Thomas W. McGinnisJon E. Keeley 《Forest Ecology and Management》2011,261(7):1275-1282

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Estimates of minimum viable population sizes for vertebrates and factors influencing those estimates     

David H Reed  Jonathan D Ballou 《Biological conservation》2003,113(1):23-34

Population size is a major determinant of extinction risk. However, controversy remains as to how large populations need to be to ensure persistence. It is generally believed that minimum viable population sizes (MVPs) would be highly specific, depending on the environmental and life history characteristics of the species. We used population viability analysis to estimate MVPs for 102 species. We define a minimum viable population size as one with a 99% probability of persistence for 40 generations. The models are comprehensive and include age-structure, catastrophes, demographic stochasticity, environmental stochasticity, and inbreeding depression. The mean and median estimates of MVP were 7316 and 5816 adults, respectively. This is slightly larger than, but in general agreement with, previous estimates of MVP. MVPs did not differ significantly among major taxa, or with latitude or trophic level, but were negatively correlated with population growth rate and positively correlated with the length of the study used to parameterize the model. A doubling of study duration increased the estimated MVP by approximately 67%. The increase in extinction risk is associated with greater temporal variation in population size for models built from longer data sets. Short-term studies consistently underestimate the true variances for demographic parameters in populations. Thus, the lack of long-term studies for endangered species leads to widespread underestimation of extinction risk. The results of our simulations suggest that conservation programs, for wild populations, need to be designed to conserve habitat capable of supporting approximately 7000 adult vertebrates in order to ensure long-term persistence.  相似文献   

Integration of multiple soil parameters to evaluate soil quality: a field example   总被引：7，自引：0，他引：7  

Jonathan J. Halvorson  Jeffrey L. Smith  Robert I. Papendick 《Biology and Fertility of Soils》1996,21(3):207-214

Development of a method to assess and monitor soil quality is critical to soil resource management and policy formation. To be useful, a method for assessing soil quality must be able to integrate many different kinds of data, allow evaluation of soil quality based on alternative uses or definitions and estimate soil quality for unsampled locations. In the present study we used one such method, based on non-parametric geostatistics. We evaluated soil quality from the integration of six soil variables measured at 220 locations in an agricultural field in southeastern Washington State. We converted the continous data values for each soil variable at each location to a binary variable indicator transform based on thresholds. We then combined indicator transformed data for individual soil variables into a single integrative indicator of soil quality termed a multiple variable indicator transform (MVIT). We observed that soil chemical variables, pools of soil resources, populations of microorgansims, and soil enzymes covaried spatially across the landscape. These ensembles of soil variables were not randomly distributed, but rather were systematically patterned. Soil quality maps calculated by kriging showed that the joint probabilities of meeting specific MVIT selection were influenced by the critical threshold values used to transform each individual soil quality variable and the MVIT selection criteria. If MVIT criteria adequately reflect soil quality then the kriging can produce maps of the probabilty of a soil being of good or poor quality.  相似文献   

The mTOR-regulated phosphoproteome reveals a mechanism of mTORC1-mediated inhibition of growth factor signaling   总被引：1，自引：0，他引：1  

Hsu PP  Kang SA  Rameseder J  Zhang Y  Ottina KA  Lim D  Peterson TR  Choi Y  Gray NS  Yaffe MB  Marto JA  Sabatini DM 《Science (New York, N.Y.)》2011,332(6035):1317-1322

The mammalian target of rapamycin (mTOR) protein kinase is a master growth promoter that nucleates two complexes, mTORC1 and mTORC2. Despite the diverse processes controlled by mTOR, few substrates are known. We defined the mTOR-regulated phosphoproteome by quantitative mass spectrometry and characterized the primary sequence motif specificity of mTOR using positional scanning peptide libraries. We found that the phosphorylation response to insulin is largely mTOR dependent and that mTOR exhibits a unique preference for proline, hydrophobic, and aromatic residues at the +1 position. The adaptor protein Grb10 was identified as an mTORC1 substrate that mediates the inhibition of phosphoinositide 3-kinase typical of cells lacking tuberous sclerosis complex 2 (TSC2), a tumor suppressor and negative regulator of mTORC1. Our work clarifies how mTORC1 inhibits growth factor signaling and opens new areas of investigation in mTOR biology.  相似文献   

Leptin regulates striatal regions and human eating behavior     

Farooqi IS  Bullmore E  Keogh J  Gillard J  O'Rahilly S  Fletcher PC 《Science (New York, N.Y.)》2007,317(5843):1355

Studies of the fat-derived hormone leptin have provided key insights into the molecular and neural components of feeding behavior and body weight regulation. An important challenge lies in understanding how the rewarding properties of food interact with, and can override, physiological satiety signals and promote overeating. We used functional magnetic resonance imaging to measure brain responses in two human patients with congenital leptin deficiency who were shown images of food before and after 7 days of leptin replacement therapy. Leptin was found to modulate neural activation in key striatal regions, suggesting that the hormone acts on neural circuits governing food intake to diminish the perception of food reward while enhancing the response to satiety signals generated during food consumption.  相似文献