Analysis of genetic diversity and population structure of confectionery sunflower (<Emphasis Type="Italic">Helianthus annuus</Emphasis> L.) native to Iran     

Marjan?Jannatdoust  Reza?DarvishzadehEmail author  Roghayyeh?Ziaeifard  Mohammad?Ali?Ebrahimi  Hamid?Hatami?Maleki  Esmaeel?Gholinezhad  Ali?Asghar?Hatamnia 《Journal of Crop Science and Biotechnology》2016,19(1):37-44

Genetic diversity within and among 50 populations of confectionery sunflower (Helianthus annuus L.) collected from different geographical areas of Iran was evaluated by using microsatellite and retrotransposon markers. The number of alleles (Na) in SSR loci ranged from 2 to 3 with an average of 2.1. The polymorphic bands in retrotransposon markers ranged from 7 in locus CR-UR1 to 15 in locus CR-816 with a mean value of 11.33. Herarchical clustering of individuals (50 × 5 = 250) by neighbor joining method in DARwin5 software subdivided them into three groups. Using Bayesian method in the software pakage of Structure, the studied individuals were subdivided into two sub-populations. Principal coordinate analysis revelaed that the two first components explaine 7.86 and 6.16% of the total variance, respectively. Analysis of molecular variance revealed a higher level of genetic variation within (70%) than between (30%) populations. High molecular variation among individuals within population possibly is due to high allogamy nature of the sunflower plant. Low genetic variation observed between populations could be considered as a consequence of genetic equilibrium that has occurred over the long period of cultivation of confectionery sunflower in this area as well as seed exchange among regions. The traditional assumption that selecting genotypes of different geographical origin will maximize the diversity available to a breeding project does not hold in confectionery sunflower.  相似文献   

Solubility and Phytoavailability of Phosphorus and Lead in a Contaminated Soil Amended with Two Phosphorus Fertilizers     

Toraj Afshari Badrloo  Mohammad Reza Shoaibi Nobariyan  AbdolAmir Bostani  Hadi Ghorbani 《Communications in Soil Science and Plant Analysis》2016,47(17):1967-1974

Application of some chemical amendments such as diammonium phosphate (DP) and triple superphosphate (TP) to contaminated soils is an effective technique to stabilize Pb and decrease its uptake by plants. A calcareous soil was spiked with the rates of 0, 250, 500, and 750 mg of lead (Pb) kg^?1 soil as Pb acetate, treated with 760 mg of P kg^?1 soil as DP and TP, and incubated for 120 days. The results showed that available phosphorus (P) increased immediately after addition of DP or TP to soil, but it declined sharply after only a few days of incubation time. Pot experiment was conducted on sorghum and spinach. The accumulation of Pb was significantly (P ≤ 0.05) lower in sorghum than in spinach, and also was lower in soil amended with DP than TP. The decreased Pb accumulation in the plants by application of both amendments was mainly attributed to the formation of chloropyromorphite.  相似文献   

Using kale (Brassica oleracea var. acephala) as a phytoremediation plant species for lead (Pb) and cadmium (Cd) removal in saline soils     

Maryam Haghighi  Mohsen Kafi  Atena Sheibanirad  Mohammad Reza Sharifinia 《Journal of plant nutrition》2016,39(10):1460-1471

Ornamental kale (Brassica oleracea var. Acephala) is usually planted from early autumn until late winter. Since most of the plants used for phytoremediation cannot be grown during this time, kale can be a suitable option for phytoremediation and utilized during autumn and winter in urban landscape, especially in metropolitan areas where high levels of cadmium (Cd) and lead (Pb) pollutions exist. Kale growth in saline soil at different growth stages (germination and vegetative growth stages) was studied in this investigation. A factorial experiment based on completely randomized design (CRD) with four replications was used in this study. Treatments included three levels of sodium chloride (NaCl) (0, 30, and 60 mg/kg), four levels of Cd (0, 4, 8, and 16 mg/kg), and four levels of Pb (0, 1, 5, and 10 mg/kg). Results indicated that increase in Cd and Pb concentrations in the soil decreased fresh and dry weights of the plants. The results of the various growth stages revealed that under salinity stress, kale plants were able to absorb more Pb than Cd and effectively remediate Pb in polluted and saline lands. Cd accumulation in control treatment was 6.2% more than that in the saline treatments, whereas, Pb accumulation in the highest NaCl level, 60 mg/kg salinity treatment was 7.64% more than that of the control condition. Also, proline content of the plants was significantly increased under Cd and Pb stress. From the results of this study, it was concluded that using kale plant is recommended for phytoremediation of saline soils with 10 and 16 mg/kg Pb and Cd contents, respectively.  相似文献   

Plant-available water and integral energy for Medicago sativa and Bromus tomentellus in texturally different soils     

Susan Barati  Mohammad Reza Vahabi  Mohammad Reza Mosaddeghi  Mehdi Bassiri 《Archives of Agronomy and Soil Science》2016,62(1):69-91

Soil water availability is very crucial for pasture plants because their growth solely depends on the soil water storage. While plant-available water (PAW) is successfully related to plant growth, it is the energy required per unit mass of water, integrated over the PAW range, named the integral energy (E_I) that determines how easily plants can take up water from the soil. The soil water retention function was integrated over the PAW range to calculate the E_I. PAW and E_I were determined for Medicago sativa (alfalfa, a legume) and Bromus tomentellus (a grass) species in five texturally different soils of semi-steppe rangeland in central Zagros, western Iran. The PAW was calculated as the difference between field capacity and permanent wilting point (nominal h of 15,000 hPa or actual h obtained from PWP value determined in greenhouse). E_I values were calculated for the nominal and actual PAW values. M. sativa PAW and E_I values were more than those from B. tomentellus, indicating that M. sativa was able to tolerate higher soil matric suctions at similar conditions. Results showed predicting E_I only from basic soil properties is not accurate. PAW and E_I are dependent on plant species and soil type interactions, and environmental compatibility.  相似文献   

Neuronal Cell Reconstruction with Umbilical Cord Blood Cells in the Brain Hypoxia-Ischemia     

Hossein Ali Ghaffaripour  Mehdi Jalali  Mohammad Reza Nikravesh  Masoumeh Seghatoleslam  Javad Sanchooli 《Iranian Biomedical Journal》2015,19(1):29-34

Background: Brain hypoxia-ischemia is a human neonatal injury that is considered a candidate for stem cell therapy. Methods: The possible therapeutic potential of human umbilical cord blood (HUCB) stem cells was evaluated in 14-day-old rats subjected to the right common carotid occlusion, a model of neonatal brain hypoxia-ischemia. Seven days after hypoxia-ischemia, rats received either saline solution or 4 × 10⁵ HUCB cells i.v. Rats in control group did not receive any injection. After two weeks, rats were assessed using two motor tests. Subsequently, rats were scarified for histological and immunohistochemical analyses. Results: Our immunohistochemical findings demonstrated selective migration of the injected HUCB cells to the ischemic area as well as reduction in infarct volume. Seven days after surgery, we found significant recovery in the behavioral performance in the test group (12.7 +/- 0.3) compared to the sham group (10.0 +/-0.05), a trend which continued to day 14 (15.3 ± 0.3 vs. 11.9 ± 0.5, P<0.05). Postural and motor asymmetries at days 7 and 14 in the test group showed a significant decrease in the percentage of right turns in comparison to the sham group (75% and 59% vs. 97% and 96%, P<0.05). Conclusion: The results show the potential of HUCB stem cells in reduction of neurologic deficits associated with neonatal hypoxia-ischemia. Key Words: Hypoxia-Ischemia, Nerve cell, Umbilical Cord Blood  相似文献   

Association between p53?Codon 72 (Arg72Pro) Polymorphism and Primary Open-Angle Glaucoma in Iranian Patients     

Hossein Neamatzadeh  Reza Soleimanizad  Masoud Zare-Shehneh  Saba Gharibi  Abolfazl Shekari  Amir Bahman Rahimzadeh 《Iranian Biomedical Journal》2015,19(1):51-56

Background: Glaucomatous neuropathy is a type of cell death due to apoptosis. The p53 gene is one of the regulatory genes of apoptosis. Recently, the association between the p53 gene encoding for proline at codon 72 and primary open-angle glaucoma (POAG) has been studied in some ethnic groups. This study is the first association analysis of POAG and p53 codon 72 polymorphism in Iranian patients. Methods: A cohort of 65 unrelated patients with POAG (age range from 12-62 years, mean ± SD of 40.16 ± 17.51 years) and 65 unrelated control subjects (without glaucoma, age range of 14-63 years, mean ± SD of 35.64 ± 13.61 years) were selected. In Iranian POAG patients and normal healthy controls, the p53 codon 72 polymorphism in exon 4 was amplified using polymerase chain reaction. The amplified DNA fragments were digested with the BstUI restriction enzyme, and the digestion patterns were used to identify the alleles for the polymorphic site. Results: Comparisons revealed significant differences in allele and genotype frequencies of Pro72Arg between POAG patients and control group. A higher risk of POAG was associated with allele Pro (OR = 2.1, 95% CI = 1.2–3.4) and genotype Pro/Pro (OR = 3.9, 95% CI = 0.13-12.7). Conclusion: The p53 Pro72 allele was more frequent in Iranian POAG patients than in the control group (P<0.05). The present findings show that the individuals with the Pro/Pro genotype may be more likely to develop POAG. However, additional studies are necessary to confirm this association. Key Words: Primary open-angle glaucoma (POAG), Glaucoma, p53, Codon 72, Iran  相似文献   

Simultaneous Analysis of Multidrug Resistance 1(MDR1) C3435T,G2677T/A,and C1236T Genotypes in Hamadan City Population,West of Iran     

Massoud Saidijam  Hossein Mahjub  Nooshin Shabab  Reza Yadegarazari 《Iranian Biomedical Journal》2015,19(1):57-62

Background: One of the limitations in the treatment of common diseases such as cancer chemotherapy is development of multidrug resistance (MDR). Polymorphisms could alter the expression level of MDR1 gene, which plays an important role in MDR. In this research, the frequency of C3435T, C1236T, and G2677T/A polymorphisms of MDR1 gene was investigated in a large group of population from Hamadan city to provide a sample data resource. Methods: Peripheral blood (2 ml) was taken, and DNA extraction was carried out. Multiplexed mutagenically separated PCR, which was followed by polyacrylamide gel electrophoresis and silver staining, was applied to detect the mentioned polymorphisms in 935 individuals. Sequencing performed for confirmation of gel electrophoresis resulted in 10 random cases. In total, alleles and genotypes of 933 persons (776 women and 157 men) were determined. Results: The most frequent alleles of the polymorphisms were: 3435T, C1236, and G2677. The most frequent genotypes were: 3435C/T, 1236C/T, and 2677G/A, and their concurrent presence was also found as the most frequent simultaneous genotypes. There was not any meaningful difference among the prevalence of these genotypes in groups of men and women. Conclusion: Our results were close to those of other studies performed in Iran and compared to the other ethnic groups, which showed more similarity to Asian peoples than Europeans. As an aspect of personalized medicine, it could be used by chemotherapists to improve the routine methods of cancer treatment.Key Words: Gene polymorphism, Multi-drug resistance, Neoplasm  相似文献   

Association of tcdA+/tcdB+ Clostridium difficile Genotype with Emergence of Multidrug-Resistant Strains Conferring Metronidazole Resistant Phenotype     

Farahnaz-Sadat Shayganmehr  Masoud Alebouyeh  Masoumeh Azimirad  Mohammad Mehdi Aslani  Mohammad Reza Zali 《Iranian Biomedical Journal》2015,19(3):143-148

Background:

Reduced susceptibility of Clostridium difficile to antibiotics is problematic in clinical settings. There is new evidence indicating the cotransfer of toxin-encoding genes and conjugative transposons encoding resistance to antibiotics among different C. difficile strains. To analyze this association, in the current study, we evaluated the frequency of toxigenic C. difficile among the strains with different multidrug-resistant (MDR) profiles in Iran.

Methods:

Antimicrobial susceptibility patterns and minimal inhibitory concentrations (MIC) of the isolates were determined against metronidazole, imipenem, ceftazidime, amikacin, and ciprofloxacin by agar dilution method. The association of the resistance profiles and toxigenicity of the strains were studied by PCR targeting tcdA and tcdB genes.

Results:

Among 86 characterized strains, the highest and lowest resistance rates were related to ciprofloxacin (97%) and metronidazole (5%), respectively. The frequency of resistance to other antibiotics was as follow: imipenem (48%), ceftazidime (76%), and amikacin (76.5%). Among the resistant strains, double drug resistance and MDR phenotypes were detected in the frequencies of 10.4% and 66.2%, respectively. All of the metronidazole-resistant strains belonged to tcdA ⁺/tcdB ⁺ genotype with triple or quintuple drug resistance phenotypes. MIC₅₀ and MIC₉₀ for this antibiotic was equally ≤ 8 μg/ml.

Conclusion:

These results proposed the association of tcdA ⁺/tcdB ⁺ genotype of C. difficile and the emergence of resistance strains to broad-spectrum antibiotics and metronidazole. Key Words: Multidrug resistance, Clostridium difficile, Metronidazole  相似文献   

Protective Role of Oleuropein against Acute Deltamethrin-Induced Neurotoxicity in Rat Brain     

Ali Reza Khalatbary  Elmira Ghaffari  Behrooz Mohammadnegad 《Iranian Biomedical Journal》2015,19(4):247-253

Background:

Deltamethrin (DM) is a synthetic pyrethroid insecticide that can elicit neurotoxicity, leading to apoptosis. There is accumulating evidence that oleuropein (OE) has anti-apoptotic effect. The purpose of this study was to determine the anti-apoptotic effect of OE pretreatment in the neuronal cells of cerebral cortex.

Methods:

Rats were randomly divided into four groups each containing five rats: DM-treated group (12.5 mg/kg, a single dose), OE-treated group (20 mg/kg per day), DM + OE-treated group, and vehicle group. Sections of the brain were obtained 24 hours after DM injection and studied for histopathological and immunohistochemistry assessment.

Results:

The histopathological assessments showed lesser characteristics of neural degeneration in DM + OE group compared with DM group. Greater Bcl-2 and attenuated Bax expression could be detected in the DM + OE treated-mice compared with DM group.

Conclusion:

The results suggested that DM-induced neurotoxicity can be subsided by OE.Key Words: Deltamethrin, Oleuropein, Apoptosis  相似文献   

Sex steroids in the seminal fluid and milt quality indices in the endangered Caspian brown trout,Salmo trutta caspius     

Hamid Reza Jamalzadeh  Maryam Akhundian  Milad Kabir  Hossein Khara  Saeed Hajirezaee 《Aquaculture Research》2014,45(6):1090-1095

In this study, the relationships between the seminal fluid sex steroids sperm quality parameters (i.e. sperm motility and sperm production were investigated in the endangered Caspian brown trout. According to results, the variation of sex steroid concentrations was comparatively high. The seminal fluid levels of 17α‐Hydroxyprogesterone (OHP) had positive correlation with percentage and duration of sperm motility. Similar correlation was found between the seminal fluid concentration of testosterone (T) and estradiol‐17β (E2) with sperm concentration. As well as, there was no significant correlation between progesterone (P) with sperm quality indices. The significant correlation of some steroids i.e. OHP, T and E2 and sperm quality parameters of Caspian brown trout confirms the key role of these steroids in acquisition of the potential of motility during final stage of the maturation.  相似文献