Inter Simple Sequence Repeat (ISSR) Analysis of Diploid Coffee Species and Cultivated Coffea arabica L. from Tanzania   总被引：1，自引：0，他引：1  

Linus I. Masumbuko  Tomas Bryngelsson 《Genetic Resources and Crop Evolution》2006,53(2):357-366

Inter simple sequence repeat (ISSR) markers were used to evaluate levels of genetic similarity among Coffea arabica L. accessions from Tanzania and to estimate levels of genetic similarities in C. arabica and diploid coffee species. The six ISSR primers used generated a total of 82 fragments and the dissimilarity values ranged from 0.21 to 1. Mean dissimilarity values between provenances (0.56–0.85) were higher than within provenances (0.37–0.68). Cluster analysis based on Nei’s genetic distances showed C. arabica provenances grouping based on geographical origin. Two major clusters were formed that constituted of provenances from Kilimanjaro and Arusha in one sub-cluster; Tanga and Morogoro in the other; the second cluster had Mbeya provenances and diploid species, respectively. The implication is that Mbeya provenances are different from the rest of Tanzanian C. arabica. A principal coordinate analysis (PCA), whose first three coordinates explained 43% of the variation, showed similar groupings as in the cluster analysis. A separate cluster analysis of diploid species showed a distinct separation of the three species used. ISSR data gave results similar to previous findings from random amplified polymorphic DNA(RAPD) analysis. The results also confirm the limited diversity present in cultivated C. arabica in Tanzania  相似文献   

CD46 in meningococcal disease     

Johansson L  Rytkonen A  Bergman P  Albiger B  Källström H  Hökfelt T  Agerberth B  Cattaneo R  Jonsson AB 《Science (New York, N.Y.)》2003,301(5631):373-375

The human-specific bacterial pathogen Neisseria meningitidis is a major cause of sepsis and/or meningitis. The pili of N. meningitidis interact with CD46, a human cell-surface protein involved in regulation of complement activation. Transgenic mice expressing human CD46 were susceptible to meningococcal disease, because bacteria crossed the blood-brain barrier in these mice. Development of disease was more efficient with piliated bacteria after intranasal, but not intraperitoneal, challenge of CD46 transgenic mice, suggesting that human CD46 facilitates pilus-dependent interactions at the epithelial mucosa. Hence, the human CD46 transgenic mice model is a potentially useful tool for studying pathogenesis and for vaccine development against meningococcal disease.  相似文献   

Comparing Deterministic and Probabilistic Risk Assessments. A case study at a closed steel mill in southern Sweden (7 pp)     

Per Sander  Tomas Öberg 《Journal of Soils and Sediments》2006,6(1):55-61

Background, Aims and Scope   Contaminated land is a high priority environmental problem in most of Europe and North-America. Sweden is no exception and generic guideline values have been developed for the initial assessment, but site-specific assessments are also needed. The generic guideline values are not applicable when the exposure conditions are different from the typical Swedish conditions or when the site contains a particularly sensitive ecosystem. The Swedish guideline values have, like in many other countries, been set by using deterministic point estimates for all variables and constants in the used multimedia model. The same approach is common also for site-specific assessments, and a limitation is that it fails to quantify variability and uncertainty. Probabilistic risk assessment provided a method to deal with this problem. Variability and uncertainty in the input parameters (variables or constants) are described by probability distributions, and likewise the output (risk or exposure) is presented as a probability distribution. A substantial number of probabilistic risk assessments for contaminated land at sites in North America, Europe and Asia have been published. However, an extensive review of the literature did not identify any study where probabilistic risk assessment was applied to a site contaminated by an iron or steel industry. Here we will describe such a case, where we have compared a deterministic point estimate with a probabilistic risk assessment for six elements and benzo[a]pyrene. Methods   The site had different metallurgical plants in operation for more than 100 years. Most parts of the steel mill were closed by the mid 1980s, and today the site is used by small-sized enterprises. The soil is contaminated with metals from the previous industrial operations. The present owner plans to develop the site and has therefore initiated extensive investigations of soil contamination. Sixty-two soil samples collected between 1997 and 2000 provided a good coverage of the whole site, and were analyzed for the content of different elements and polycyclic aromatic hydrocarbons (PAH). The exposure assessments were focused on six elements with high concentrations compared to the generic guideline values; arsenic (As), lead (Pb), cadmium (Cd), chromium (Cr), copper (Cu) and zinc (Zn). In addition, benzo[a]pyrene was included due to the high toxicity and comparatively high concentrations. Variability and uncertainty were characterized in a Monte Carlo simulation of exposures (10 000 iterations), and the exposures were evaluated with two land use scenarios; less sensitive use and sensitive use. Results and Discussion   The deterministic point estimates and the probabilistic estimates of the 95th percentile are in approximately the same ranges in the scenario of less sensitive land use. It is only the exposure for arsenic that is slightly above the toxicological reference value (TRV) in the deterministic assessment. In the probabilistic assessment, the exposure for all elements is below the TRV. The results for sensitive land use are applicable to a scenario where the site is developed for general housing. The deterministic point estimates and the probabilistic estimates of the 95th percentile are also here in approximately the same ranges, but the exposure exceeds the TRV for arsenic, cadmium and lead. Drinking water, vegetables grown on site and soil ingestion are the major exposure pathways for this scenario. In this assessment, the estimated intake distributions are applicable to a randomly selected individual. The probability distributions used here to characterize the different soil parameters are typically representing both variability and uncertainty, and the same is true the majority of the exposure variables. We therefore decided not to attempt to separate variability and uncertainty at this stage, but with additional data from a more in-depth site investigation it might be possible to achieve this. Conclusions and Outlook   To the best of our knowledge, this study is the first report on a probabilistic risk assessment on a former iron and steel works site. The materials handled by this industry were less toxic than for many other metallurgical operations, but contaminants may still severely limit the options for future land use. This case study shows that probabilistic exposure estimates for a set of soil contaminants can be quite similar to deterministic point estimates. The main difference is instead to be found in the additional information obtained with the probabilistic assessment. The sensitivity analyses show pathways and input variables that contribute most to variations in the total intake of each contaminant, e.g. dermal contact and ingestion of soil, vegetables and drinking water. This information can be used both in the planning of future land use and for active measures to reduce current exposure. The probabilistic assessment also provides information on the magnitude of exposure and the margin of safety. This information may facilitate risk communication between decision-makers and stakeholders. The presentation of results from probabilistic risk assessments is only briefly discussed in the literature and here we see a need for research and opportunities for enhancement. The choice of data analytical tools may then be of importance, since more complex multimedia models are rather difficult to decipher when implemented within traditional spreadsheet software. Some of the research needs are identified here and in a previous review article in this journal.  相似文献   

Effect of organic amendments on the retention and mobility of imazaquin in soils   总被引：3，自引：0，他引：3  

Undabeytia T  Sanchez-Verdejo T  Morillo E  Maqueda C 《Journal of agricultural and food chemistry》2004,52(14):4493-4500

The influence of two organic amendments consisting of an urban waste compost (SUW) and a commercial amendment from olive mill wastes (OW) was assessed on the sorption properties and leaching of the ionizable herbicide imazaquin on four soils with different physicochemical characteristics. A loamy sand soil (CR), a loam soil (P44), a silt loam soil (AL), and a clay soil (TM), with low-medium organic matter contents, were chosen. Sorption-desorption experiments were performed on the original soils and on a mixture of these soils with the organic amendments at a rate of 6.25% (w/w). These mixtures were used just after preparation and after aging for 3 months. Imazaquin adsorption was higher on AL soil because of its high content of amorphous iron oxides, whereas it was related to the soils' organic matter (OM) contents on TM and CR soils and to acid pH on P44 soil. Addition of exogenous OM to soils caused a decrease in the adsorption of the herbicide with the only exception of CR soil, due to blocking of adsorptive surfaces and/or equilibrium pH rise. The extent of this decrease was dependent only on the nature of the added amendment on AL soil. The adsorbed amounts of imazaquin on aged organic fertilized soils were usually fairly close to that on original soils. Results of soil column experiments indicate that addition of exogenous organic matter cannot be considered as a regular practice for retarded movement of imazaquin.  相似文献   

Metsulfuron methyl sorption-desorption in field-moist soils   总被引：4，自引：0，他引：4  

Berglöf T  Koskinen WC  Duffy MJ  Norberg KA  Kylin H 《Journal of agricultural and food chemistry》2003,51(12):3598-3603

Pesticide sorption coefficients (K(d)) are generally obtained using batch slurry methods. As a consequence, the results may not adequately reflect sorption processes in field-moist or unsaturated soil. The objective of this study was to determine sorption of metsulfuron methyl, a weak acid, in field-moist soils. Experiments were performed using low density (i.e., 0.3 g mL(-)(1)) supercritical fluid carbon dioxide (SF-CO(2)) to convert anionic metsulfuron methyl to the molecular species and remove it from the soil water phase only, thus allowing calculation of sorption coefficients (K(d)) at low water contents. K(d) values for sorption of the metsulfuron methyl molecular species on sandy loam, silt loam, and clay loam soil at 11% water content were 120, 180, and 320 mL g(-)(1), respectively. Using neutral species K(d) values, the pK(a) of metsulfuron methyl, and the pH of the soil, we could successfully predict the K(d) values obtained using the batch slurry technique, which typically has a predominance of anionic species in solution during the sorption characterization. This application of supercritical fluid extraction to determine sorption coefficients, combined with sulfonylureas' pK(a) values and the soil pH, will provide an easy method to predict sorption in soil at different pH levels.  相似文献   

Azotemia and mortality among Babesia microti-like infected dogs     

Camacho AT  Guitian EJ  Pallas E  Gestal JJ  Olmeda AS  Goethert HK  Telford SR  Spielman A 《Journal of veterinary internal medicine / American College of Veterinary Internal Medicine》2004,18(2):141-146

Babesia microti-like piroplasms are a recently recognized cause of illness in dogs in northwest Spain. Our objective was to describe the clinical characteristics and investigate the risk factors for azotemia and death among 58 B microti-like infected dogs. Twenty-one of the 58 (36%) dogs were azotemic at the time that the infection was diagnosed. The case fatality rate during the following week was 22%. Dogs with azotemia at the time of diagnosis were 10 times (95% CI, 3.26-28.8) more likely to die during the following week. Azotemia was the main cause of death for B microti-like infected dogs (attributable fraction = 90%). Severe anemia was present in 45 of the 58 (78%) dogs. Azotemic dogs also presented with hyperphosphatemia, hypoalbuminemia, hypercholesterolemia, proteinuria, and high urine protein: creatinine ratios, suggesting a glomerular component to the disease. Age was the only factor significantly associated with the risk of azotemia (P = .042): on average, a 4-year age increase doubled the risk of an infected dog being azotemic. The only factor significantly associated with mortality was azotemia (P = .001). We concluded that B microti-like infection is associated with a high risk of azotemia and mortality.  相似文献   

Septic epiglottic chondritis with abscessation in 2 young Thoroughbred racehorses     

Infernuso T  Watts AE  Ducharme NG 《The Canadian veterinary journal. La revue veterinaire canadienne》2006,47(10):1007-1010

Septic epiglottic chondritis with abscessation diagnosed in 2 Thoroughbred racehorses. Infected cartilage removed videoendoscopically followed by systemic antibiotics. The infectious process was successfully controlled, but permanent dorsal displacement of the soft palate (DDSP) with a shortened, deformed epiglottic cartilage developed. Surgery for the DDSP using bilateral partial sternothyroidectomy or laryngeal tie-forward failed.  相似文献   

Immunology. Restless T cells sniff and go     

Mustelin T 《Science (New York, N.Y.)》2006,313(5795):1902-1903

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Effects of cortisol on pregnancy rate and corpus luteum function in heifers: an in vivo study     

Duong HT  Piotrowska-Tomala KK  Acosta TJ  Bah MM  Sinderewicz E  Majewska M  Jankowska K  Okuda K  Skarzynski DJ 《The Journal of reproduction and development》2012,58(2):223-230

To determine whether glucocorticoids affect the function of the bovine corpus luteum (CL) during the estrous cycle and early pregnancy, we examined the effects of exogenous cortisol or reduced endogenous cortisol on the secretion of progesterone (P4) and on pregnancy rate. In preliminary experiments, doses of cortisol and metyrapone (an inhibitor of cortisol synthesis) were established (n=33). Cortisol in effective doses of 10 mg blocked tumor necrosis factor-induced prostaglandin F(2α) secretion as measured by its metabolite (PGFM) concentrations in the blood. Metyrapone in effective doses of 500 mg increased the P4 concentration. Thus, both reagents were then intravaginally applied in the chosen doses daily from Day 15 to 18 after estrus (Day 0) in noninseminated heifers (n=18) or after artificial insemination (n=36). Pregnancy was confirmed by transrectal ultrasonography between Days 28-30 after insemination. Plasma concentrations of P4 were lower in cortisol-treated heifers than in control heifers on Days 17 and 18 of the estrous cycle (P<0.05). However, the interestrus intervals were not different between control and cortisol-treated animals (P>0.05). Moreover, metyrapone increased P4 and prolonged the CL lifespan in comparison to control animals (P<0.05). Interestingly, in inseminated heifers, cortisol increased the pregnancy rate (75%) compared with control animals (58%), whereas metyrapone reduced the pregnancy rate to 16.7% (P<0.05). The overall results suggest that cortisol, depending on the physiological status of heifers (pregnant vs. nonpregnant), modulates CL function by influencing P4 secretion. Cortisol may have a positive influence on CL function during early pregnancy, leading to support of embryo implantation and resulting in higher rates of pregnancy in heifers.  相似文献   

Measuring density effects on growth and survival of two size classes of juvenile sea urchins (Strongylocentrotus droebachiensis) held in sea‐based holding systems and impacts on holding system design and management          下载免费PDF全文

Philip James  Sten Ivar Siikavuopio  Tomas Wyatt Reguera 《Aquaculture Research》2017,48(11):5541-5549

Assessing density in intensive sea urchin culture systems by measuring the percentage coverage of available surface area is an effective means of calculating the available space within a holding system, the proximity of the animals in the system to each other and the probable effects of the stocking density. The results of this study show that density plays a critical role in regard to both somatic growth (increase in test diameter measured in millimetres) as well as mortality of juvenile sea urchins ranging in size from 5 mm to 26 mm test diameter (the size range tested in the current experiments). These effects appear to be greater for smaller urchins. The critical percentage coverage densities are in the order of 50%‐60% coverage for juvenile sea urchins, and the authors advise farmers growing Strongylocentrotus droebachiensis to maintain stocking densities below this point and to reduce the stocking densities as and when stocks reach these critical density points. Percentage cover must be constantly monitored as the results from this study indicate that the growth rates of juvenile urchins can alter percentage coverage rapidly and reductions in density may be required as frequently as every 3‐4 months at the early juvenile stage. Holding system design should take these factors into account and incorporate a method of rapidly reducing stocking densities with minimal stress and handling of sea urchin stocks.  相似文献