参考群筛选方法及规模对基因型填充准确性的影响     

阳文攀  叶绍潘  叶浩强  林清  魏趁  张志刚  张细权  陈赞谋  张哲 《畜牧兽医学报》2021,52(12):3357-3365

为探究基于A矩阵期望遗传关系最大化（maximizing the expected genetic relationship for matrix A,RELA）、基于A矩阵目标群体遗传方差最小化（minimized the target population genetic variance for matrix A,MCA）、平均亲缘关系最大化（the highest mean kinship coefficients,KIN）、随机选择（random selection,RAN）、共同祖先筛选（common ancestor,CA）等不同参考群筛选方法及参考群规模对基因型填充准确性的影响。本研究使用矮小型黄羽肉鸡作为试验群体,采用鸡600K SNP芯片（Affymetrix Axion HD genotyping array）进行基因分型,测定435羽子代公鸡45、56、70、84、91日龄体重。利用Beagle软件将低密度SNP芯片填充为高密度SNP芯片数据,比较不同参考群筛选方法、参考群规模对基因型填充准确性的影响,以及填充芯片基因组预测准确性。结果表明,使用Beagle 4.0结合系谱信息进行填充效果最佳,其次为Beagle 4.0,而Beagle 5.1填充效果最差。使用MCA方法筛选参考群进行基因型填充准确性最高,使用RAN方法筛选参考群进行基因型填充准确性最低,MCA、RELA、CA 3种方法基因型填充准确性差别较小。相比其他方法,使用MCA方法筛选个体作为参考群将低密度SNP芯片填充至高密度SNP芯片进行基因组选择的预测准确性较高,与真实高密度SNP芯片的基因组预测准确性相差甚微。随着参考群规模增大,基因型填充准确性也随之增加,但增速逐渐下降,最后趋于平缓。综上所述,可以通过参考群筛选方法构建参考群以及控制参考群规模,以保证基因型填充和基因组预测准确性并节省成本,本研究为基因型填充在畜禽遗传育种中的应用提供技术参考。  相似文献   

The value of incorporating carcass trait phenotypes in terminal sire selection indexes to improve carcass weight and quality of heavy lambs     

Erin Massender  Luiz F. Brito  Angela Cnovas  Christine F. Baes  Delma Kennedy  Flavio S. Schenkel 《Zeitschrift für Tierzüchtung und Züchtungsbiologie》2021,138(1):91-107

Genetic selection for carcass traits is paramount to maximize the profitability and long‐term sustainability of any meat‐producing livestock species. The main objectives of this research were to evaluate the efficiency of indicator traits for the genetic improvement of lamb carcass traits and to determine the value of including carcass traits into terminal sire selection indexes for the Canadian sheep industry. The carcass traits included hot carcass weight (HCW), fat depth at the GR site (FATGR) and average carcass conformation score (AVGCONF), and were measured on heavy lambs (slaughter age less than 365 days and HCW greater than 16.3 kg) in commercial abattoirs. Growth traits were found to be moderately efficient indicator traits for the genetic improvement of HCW but selection on ultrasound traits was necessary to substantially improve the carcass quality traits (FATGR and AVGCONF). Economic selection indexes were designed by adding various combinations of carcass traits into the Canadian Sheep Genetic Evaluation System terminal indexes. Records measured on individuals and progeny were assumed to be the sources of information for live animal and carcass traits, respectively. The changes in index accuracy, efficiency and expected correlated response were used to assess the value of their inclusion. HCW was found to have a large economic value, and its inclusion into terminal selection indexes was expected to substantially increase their accuracy (0.08–0.12 points) and efficiency (20%–30%). However, further including FATGR (measured 110 mm from the carcass midline over the 12th rib) and AVGCONF had little impact on the accuracy (≤0.03) and efficiency (1%–7%) of the proposed indexes. Thus, the inclusion of carcass traits into the existing terminal selection indexes could be beneficial for the genetic improvement of HCW, but further research is needed to determine optimal methods of increasing carcass fatness and muscularity.  相似文献   

基于随机森林的高寒草地地上生物量高光谱估算     

高宏元  侯蒙京  葛静  包旭莹  李元春  刘洁  冯琦胜  梁天刚  贺金生  钱大文 《草地学报》2021,29(8):1757-1768

草地地上生物量（Aboveground biomass,AGB）是衡量草地生产力的关键因素,准确测定草地AGB具有重要意义。高光谱因具有时效性强、不破坏草地等特点被广泛用于草地生理生态指标的测定。本研究提取和计算了海北试验站高寒草地冠层的原始光谱（Original spectrum,OR）反射率、一阶微分光谱（First derivative spectrum,FD）反射率、光谱位置面积参数（Spectral parameters of spectral position and area,PA）和植被指数（Vegetation indices,VI）4种不同类型的特征变量,使用连续投影算法（Successive projections algorithm,SPA）和递归特征消除算法（Recursive feature elimination,RFE）进行特征选择,采用随机森林算法（Random forest,RF）构建草地AGB估测模型。结果表明：在由4种特征变量分别构建的草地AGB估测模型中,基于VI的RF模型精度最高（测试集R²=0.70,RMSE=557.87 kg·ha^-1）,实测AGB与估测AGB的线性R²达到0.72;不同类型特征变量组合构建的草地AGB估测模型中,PA+VI组合的RF模型精度最高（R²=0.71,RMSE=548.97 kg·ha^-1）,实测AGB和估测AGB的线性R²达到0.73。  相似文献   

农业推广方法选择研究——以陕西省三原县为例     

王云刚  谢小玉 《安徽农学通报》2007,14(16):15-16,39

本文以陕西省三原县为例,采用典型调查方法,运用问卷调查、农户访问等资料搜集手段,研究各种因素对农业推广方法选择的影响.研究结果表明:推广对象的经济状况、采用创新的不同阶段以及推广对象的文化程度等都影响到农业推广方法的选择,而要最大限度地提高推广效果需要综合采用多种农业推广方法.  相似文献   

溪岸蠼螋对棉铃虫的捕食能力     

田彩红  张俊逸  徐存翊  李国平  黄建荣  刘毅  王根松  封洪云  尹新明  封洪强 《植物保护》2023,49(1):157-163

为明确棉田溪岸蠼螋 Labidura riparia 对棉铃虫的控害潜能, 在实验室条件下观察和测定了溪岸蠼螋不同龄期的若虫、雌雄成虫对棉铃虫幼虫、蛹和成虫的捕食能力以及其5龄若虫和雌雄成虫的捕食选择性。结果表明:不同发育阶段的溪岸蠼螋都不捕食棉铃虫完整的蛹体, 但对棉铃虫幼虫和成虫都具有较强的捕食能力。其中, 雌性溪岸蠼螋成虫的捕食能力最强, 对棉铃虫1龄幼虫日捕食量最大, 为(31.3±1.1)头。1龄溪岸蠼螋若虫也具有一定的捕食能力, 对棉铃虫1龄幼虫日捕食量为(1.7±0.7)头。不同龄期的溪岸蠼螋对相同龄期棉铃虫幼虫的捕食能力随龄期增加而增大。对1~3龄棉铃虫幼虫,溪岸蠼螋雌成虫捕食能力最强,其次是溪岸蠼螋雄成虫,再次是溪岸蠼螋5龄若虫。但是,对棉铃虫4~6龄幼虫和雌雄成虫,溪岸蠼螋雌雄成虫和5龄若虫的捕食量差异不显著。捕食选择试验表明:溪岸蠼螋5龄若虫和雌雄成虫对棉铃虫1～4龄幼虫均表现正喜好性, 对5～6龄棉铃虫幼虫和雌雄成虫表现负喜好性。  相似文献   

Vehicle Type Recognition by Using Support Vector Machine SVM     

XlAO Han-guang  CAI Cong-zhong  WANG Wan-lu 《保鲜与加工》2006,(1):61-65

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Solid Model Design on the Features of Products     

LI Shao bin 《保鲜与加工》2002,(4):29

To research the problem of plastic art design and emulation of products with the virtual reality technology can short the product development cycle and reduce the cost. This paper discusses the information based on the product feature ,solid model with parameters, the structure and function of this system. Combined the product properties with its solid model. Proposed a method with CAD to create the model of the product based on features in the product design. Expressed its feature parameter and shape of model fully .In the case for a deceleration box the feature model has solved the problem of physical information ,geometry information and the informative process in its production management system efficiently.  相似文献   

Decision Making for Vendor Selection With AHP and Random Disposal of DEA     

HUANG Shao-fu~  ZHAO Han~ 《保鲜与加工》2004,(2):28-31

The vendor selection directly relatives to the procurement quality and influences the competition of the corporation in the supply chains. It is important and practical to study the vendor selection method. The measuring criteria and the method for vendor selection are analyzed. The authors put forward an new method which is combined with both the advantage of analytic hierarchy process (AHP ) and random disposal of data envelopment analysis ( DEA) for vendor selection. It introduces a random variable which solves the disadvantage of the weigh value in DEA which convert subjective estimation to objective opinion in the course of the vendor selecting. The method can improve the reliability of the vendor selection.  相似文献   

各向异性砂土剪切带角度的理论分析     

李学丰  袁琪  马文国 《保鲜与加工》2015,(4):90-96

针对平面应变条件下各向异性砂土剪切带角度的试验规律,采用传统的3种理论和分叉理论进行对比分析。将平面应变条件下剪切带角度的试验结果按照传统3种理论整理发现,尽管传统3种理论可以估算同种砂剪切带角度的极小、中间和极大值,但无法解释其各向异性规律。砂土在平面应变条件下破坏时会产生明显的剪切带,当剪切带方向和砂土沉积面方向接近时,会较早诱发剪切带的产生,使材料强度降低,造成了平面应变条件下各向异性强度规律明显不同于常规三轴条件下的试验规律,采用分叉理论结合各向异性模型则可以有效解释这个规律。随砂土沉积面角度的变化,模型可以从细观角度解释常规三轴条件下剪切带角度的单调变化的试验规律,结合分叉理论可以描述平面应变条件下其先减小然后增大的规律。通过几种理论对比分析表明,模型结合分叉理论不但能够描述多种应力状态下的平面应变和常规三轴应力条件下剪切带角度表现的不同规律,而且能够从细观角度解释其各向异性成因。  相似文献   

小麦轮回选择的初步实践   总被引：2，自引：0，他引：2  

王振富  双志福  张瑞仙  降彩霞 《华北农学报》1987,(1)

利用太谷核不育小麦,开展以抗锈和矮秆丰产为主要目标的轮回选择,选择压分别为5.6%和4.7%.抗锈群通过一轮混合选择,条锈病反应型0—1级的抗病株率和严重度25%以下的轻病株率较基础群体分别提高12.5%和5.1%.矮秆丰产群采用两种轮选方案.经两轮选择看出,改良半姐妹法其群体的株高比基础群体明显降低6.2厘米,其余性状有向选择目标集中的趋势;混合选择法其群体除穗粒数外,其余性状进展趋势与上相同.  相似文献