Genetic analysis and QTL mapping of growth period traits and plant height traits in soybean recombinant inbred lines from Dongnong 47 × PI 317334-B     

《中国油料作物学报(英文)》2021,6(2):66-73

High and stable yield is the main goal of soybean genetic improvement. In this study, association analysis was used to detect the quantitative trait loci (QTL) for the plant height, and soybean growth period using 182 SSR markers in the RIL population of 136 F_4:8 lines, which developed from a cross between photoperiod-insensitive cultivar ‘Dongnong 47’ and photoperiod-sensitive variety PI317334–B. The results showed that 33 QTLs related to soybean growth period and plant height traits were detected by compound interval mapping, and were located on 12 linkage groups including N, C1, C2, J, D1a, B2, E, G, A2, O, L, I, with the contribution rate of 7.85–33.84%. These QTL loci and linkage markers related to soybean photoperiod sensitivity, would be helpful to identify key genes that control soybean photoperiod sensitivity, and provide an important basis for the breeding of new photoperiod-insensitive soybean varieties based on molecular design breeding.  相似文献   

Segment-based coancestry,additive relationship and genetic variance within and between the Norwegian and the Swedish Fjord horse populations     

Hanne Fjerdingby Olsen  Saija Tenhunen  Nils Ivar Dolvik  Dag Inge Våge  Gunnar Klemetsdal 《Acta Agriculturae Scandinavica, Section A - Animal Sciences》2020,69(1-2):118-126

ABSTRACT

The Fjord horse originates from Norway but forms a global population due to several small populations in foreign countries. There exists no information about the additive relationship and the genetic variance between these subpopulations. By collecting blood samples from Norwegian and Swedish Fjord horses, a sample of 311 Norwegian and 102 Swedish horses gave 485,918 SNPs available for analysis. Their inbreeding coefficients were calculated and compared to the pairwise coancestry and the shared genomic segments. The effective population size was almost similar with the two methods in the Norwegian Fjord horse population (63 and 71), but very different in the Swedish population (269 and 1136) and unprecise due to a much smaller number of observations. The study showed that coancestry from shared genomic segments can be used to estimate additive genetic relationship and genetic variation within and between the global populations of the Fjord horse.  相似文献   

基于nSSR和cpDNA序列的城步峒茶群体遗传多样性和结构研究     

刘振  成杨  杨培迪  赵洋  宁静  杨阳 《茶叶科学》2020,40(2):250-258

采用简单重复序列标记(nSSR)与叶绿体DNA序列(cpDNA)分析技术,对城步峒茶群体进行了遗传多样性、遗传结构和遗传分化等研究。结果表明,15对nSSR引物在参试81份资源中共获得142个等位位点,平均每对引物9.47个,城步峒茶群体的观测杂合度(Ho)、期望杂合度(He)和Nei期望杂合度(Nei)分别为0.49、0.62和0.62,具有较高的遗传多样性。Structure分析将79份峒茶资源分成3个类群,但各类群的遗传背景较为复杂,没有明显的群体结构。F检验表明,城步峒茶群体的近交系数F_IS为正值(F_IS=0.177 5),群体间的遗传分化系数F_ST较小(F_ST=0.034 5),分化程度较低,基因流Nm较高(Nm=7.01)。3对cpDNA引物分别获得了473 bp(rbcL)、704 bp(matK)和320 bp(psbH-trnA)的片段序列,变异位点占总位点的比例分别为0.42%、0.71%和1.25%。将3个序列依次拼接,共产生了9个单倍型,单倍型数由多到少的居群依次为TXZ(6)、DZC(4)、DPS(4)、TYS(3)、HJZ(2),群体的单倍型多样性(Hd)和核苷酸多样性(π)分别为0.732和0.001 39。9个单倍型中,单倍型H1和H5处于进化网络图的中心节点上,并且包含资源数量最多,属于比较原始的单倍型。同时,nSSR和cpDNA的AMOVA分析结果基本一致,居群内的变异百分比分别达到96.69%和80.54%,城步峒茶的遗传变异主要存在于居群内。  相似文献   

Precision/Genomic Medicine for Domestic Cats     

《Veterinary Clinics of North America: Small Animal Practice》2020,50(5):983-990

  相似文献   

云南传统水稻品种W axy基因多样性形成和维持机制初探     

陈虹  单佳  陆大庆  王云月  陆春明 《分子植物育种》2014,(6)

本研究针对W axy基因第四外显子和第五外显子的3个功能位点开发了新的AS-PCR标记，完善了W axy基因的分子标记体系，为更精确的鉴定和筛选目标W axy等位基因提供了工具。直链淀粉含量测定和AS-PCR分析结果显示，云南传统水稻品种具有极为丰富的W axy基因多样性和直链淀粉含量变异，308个传统品种中共检测到65种不同的W axy单倍型，直链淀粉含量变幅为0~48%。In1、E6、E10和E4op/hp这4个位点的碱基频率在四大稻区间存在显著差异，E2位点和In1位点的碱基频率在不同民族间存在显著差异，表明不同稻作区、不同民族对水稻直链淀粉含量和W axy基因有着多样化的选择。同时民族混居地区E2和In1位点的碱基频率不同于其相应的民族独居地区，说明不同民族混居也会产生对W axy基因不同的选择并增加W axy基因的多样性。多样化的选择和民族混居是云南传统水稻品种W axy基因多样性形成和维持的重要机制。在云南四大稻作区中，南部边缘水陆稻区的W axy单倍型最为丰富，共检测到50种单倍型，占总数的77%，这一区域应被设为云南传统稻种资源的保护优先区和核心区。  相似文献   

花椰菜主要性状遗传规律以及性状相关性分析     

郎朗  姚星伟  刘莉莉  文正华  单晓政 《天津农业科学》2011,17(3):98-100

总结了花椰菜的单球质量、成熟期、株高株展、花球品质等主要性状的遗传规律以及性状之间的相关性,并得出结论:花椰菜主要性状遗传规律以及性状相关性研究对育种研究具有重要指导意义,但必须注重与田间调查相结合,只有将遗传规律与田间调查有机结合才能提高育种效率,提高育种水平。  相似文献   

廊道景观边缘效应研究     

谢红娟  陈顺山 《湖南林业科技》2016,(3):98-100

运用景观生态学原理,依据绿色廊道的生态功能,对长沙市廊道景观边缘和内部的主要植物种类及其重要值进行了调查和分析。结果表明:在同一条件下,廊道景观边缘植物种类多于内部植物种类。这可为长沙市廊道景观的生态建设提供参考依据。  相似文献   

Evidence for genetic distinction among sympatric ecotypes of Arctic char (Salvelinus alpinus) in south‐western Alaskan lakes          下载免费PDF全文

Shannan L. May‐McNally  Thomas P. Quinn  Pamela J. Woods  Eric B. Taylor 《Ecology of Freshwater Fish》2015,24(4):562-574

Resource polymorphism may play an important role in the process of speciation. The Arctic char (Salvelinus alpinus) exhibits great phenotypic and genetic diversity across its range, making it an ideal species for studies of resource polymorphism and divergence. Here, we investigated genetic variation at 11 microsatellite loci among 287 Arctic char from five isolated yet proximate postglacial lakes in south‐western Alaska that were previously examined for resource polymorphism. Significant differences in pairwise F_ST were detected among all lakes (range from 0.05 to 0.28, all P < 0.02). In one lake (Lower Tazimina Lake), we found evidence for two genetic groups of char and for significant differences in the distribution of microsatellite variability among at least two of the three previously described body size morphotypes (‘large’‐, ‘medium’‐, and ‘small’‐bodied char; maximum F_ST = 0.09; differences in admixture proportions). We also found a significant association between genetic admixture proportions and gill raker counts among body size morphs (r = ?0.73, P < 0.001). Our data represent the first record of genetically distinct sympatric morphs of Arctic char in Alaska and provide further evidence that differences in morphology associated with feeding (gill rakers) and growth trajectories reflect niche diversification and promote genetic divergence in Holarctic populations of Arctic char.  相似文献   

玉米茎秆抗倒伏遗传的研究进展   总被引：2，自引：0，他引：2  

王夏青  宋伟  张如养  陈怡凝  孙轩  赵久然 《中国农业科学》2021,54(11):2261-2272

茎秆倒伏严重影响玉米产量、品质和机械化收获,是当前玉米生产和育种亟待解决的主要问题之一。加强对玉米茎秆抗倒伏性的研究,对提高品种抗倒伏能力具有重要意义。本文综述了玉米茎秆倒伏的主要影响因素及其遗传特征。茎秆倒伏与茎秆自身的强度密切相关。茎秆强度越高,抗倒伏性越强。茎秆强度受茎秆所处的发育阶段、茎秆内部结构和外部形态,及其细胞壁成分等影响。处于分生组织的茎秆细胞分裂旺盛,较易折断,而进入生殖生长后,茎秆表皮、厚壁组织增厚,维管束发育成熟,对茎秆的支撑作用增强。茎秆细胞壁的主要成分——纤维素、半纤维素、木质素、可溶性糖、无机物等均可提升茎秆强度。目前,研究者借助高通量表型平台,利用玉米连锁群体和自交系群体,采用各种定位方法,鉴定到一系列影响茎秆形态、强度、细胞壁成分的相关QTL和候选基因。研究表明,基于单倍型的QTL定位方法比基于单个SNP的定位效果好。一致性QTL分析将不同遗传群体的研究整合到一起,能够提高QTL结果的通用性。茎秆强度的遗传基础复杂,受微效多基因控制,位点间具有加性效应。茎秆成分QTL中的候选基因涉及细胞壁代谢、转录因子、蛋白激酶等。MAIZEWALL是玉米细胞壁相关基因的重要数据库。目前该数据库包含1 156个玉米细胞壁生物学相关的候选基因,为该领域的深入研究提供强大的资源。已鉴定到一系列影响玉米茎秆细胞壁成分、茎秆形态和强度的基因,其功能涉及纤维素合成路径,如纤维素合成酶类、Cobra类、糖基转移酶和核糖转运蛋白类;苯丙烷路径基因,如控制bm1—bm5的相关基因;植物激素类,如赤霉素、生长素、油菜素甾醇相关基因;转录因子如NAC、MYB;miRNA（ZmmiR528）以及F-box基因（stiff1）等。今后应积极探索不同发育时期玉米茎秆倒伏的力学机制;广泛发展自然群体或育种群体进行遗传分析;采取多种定位策略,提高抗倒伏相关基因鉴定的功效;针对优良等位基因,开发各类分子标记,加强抗倒伏分子标记辅助选择。本文将为玉米茎秆抗倒伏遗传机制解析及抗倒伏玉米品种的分子育种提供参考。  相似文献   

棉花单核苷酸多态性标记研究进展   总被引：1，自引：0，他引：1  

王振玉  李威  周晓箭  裴小雨  刘艳改  周克海  张文生  孟清芹  王海风 《棉花学报》2016,28(4):399-406

单核苷酸多态性标记已在农作物研究中得到广泛应用并取得重大进展。为了便利棉花SNP(Single nucleotide polymorphism)标记的研究和应用,介绍了利用基因芯片、简化基因组测序、重测序等在棉花中开发SNP标记的方法 ,综述了SNP标记在棉花遗传图谱构建、数量位点的定位和分子标记辅助育种、基因组测序以及系统进化等研究中的应用。并对异源四倍体棉花中SNP标记开发时,同源序列位点和部分同源序列位点上的SNP标记辨别问题进行了系统探讨,对其快捷的开发、检测方式和在数量基因定位中的应用前景进行了展望。  相似文献