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基于空间自相关构建树木生长模型 总被引：1，自引：1，他引：0
2004—2008年，在日本九州地区宫崎县田野天然次生林内设置的一块100 m×100 m固定标准地中，通过每木调查，测量了固定标准地内树木的种类、空间位置、生长等数据。为了便于理解，以固定标准地中优势树种蚊母树为主要研究对象，在考虑周边所有树木的影响的同时，利用贝叶斯统计方法分析了空间自相关及树木间的对称竞争、非对称竞争对树木生长过程的影响，并比较了忽略空间自相关的情况。结果表明:在构建研究对象树种的生长模型时，树木个体间的竞争是不可缺少的参数，尤其是个体间的对称竞争。在利用空间自相关参数建模时，最终模型的决定系数R2＝0.83；而忽略空间自相关参数的模型，其决定系数R2＝0.74。通过其他主要树种的分析也表明了导入空间自相关参数的优越性，因此可以认为，考虑空间自相关的随机效应模型能更精确地预测树木的生长。本研究所采用的空间自相关模型不仅可以利用树木个体的分布信息推测其生态学特征，还为树木生长模拟提供了理论与方法上的借鉴。 相似文献
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Akiyoshi H Aoki M Kumagai D Saleh N Noda K Shimada T Sugii S Ohashi F 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2005,67(5):535-537
Bovine and canine chromogranin A were extracted and purified from each specie's adrenal glands. Isolated bovine 70 kDa protein showed 100% identity to bovine CgA reported previously, whereas isolated canine 68 kDa protein showed 83.3% identity to bovine CgA by the NH(2)-terminal amino acid sequence analysis. Rabbit antibody to purified bovine protein (CgA) was found to immunologically cross-reacted with purified canine protein (CgA). In sandwich ELISA with anti-bovine CgA, concentration-dependent curves were obtained ranging from 0.3 to 20 mug/ml for canine CgA. From these findings, sandwich ELISA with anti-bovine CgA is found to be useful to determine the concentration of canine CgA. 相似文献
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Akiyoshi H Aoki M Shimada T Noda K Kumagai D Saleh N Sugii S Ohashi F 《American journal of veterinary research》2005,66(10):1830-1835
OBJECTIVE: To determine whether cross-reactivity exists between canine chromogranin A (CgA) and anti-human CgA antibody and investigate the usefulness of plasma CgA concentration measurements as an index of acute stress responses in dogs. ANIMALS: 12 healthy Beagles. PROCEDURE: Canine CgA was extracted and purified from canine adrenal glands of cadaver dogs for studying cross-reactivity with anti-human CgA antibody. Western blotting with anti-human CgA antibody was performed. Blood samples were collected from dogs at 0, 10, 20, 30, 40, 60, 120, and 180 minutes after IV administration of saline (0.9% NaCl) solution or insulin. Canine plasma CgA concentrations were determined by use of a CgA ELISA kit with rabbit antiserum against the carboxy-terminal fragment of human CgA. Plasma cortisol and catecholamine (ie, norepinephrine and epinephrine) concentrations were measured by use of an ELISA and a high-performance liquid chromatography method, respectively. RESULTS: Purified canine CgA was specifically detected by use of western blot analysis and an ELISA with anti-human CgA antibody. An increase in plasma CgA concentrations was observed in insulin-induced hypoglycemic dogs. Changes in plasma CgA concentration were correlated with changes in plasma cortisol or catecholamine concentrations of hypoglycemic dogs. CONCLUSIONS AND CLINICAL RELEVANCE: Use of the CgA ELISA kit for determination of human plasma CgA concentrations is applicable to the measurement of canine plasma CgA concentrations. Canine plasma CgA concentrations, along with measurements of plasma cortisol and catecholamine concentrations, correctly reflect insulin-induced hypoglycemic stressed conditions in dogs. Measurement of canine plasma CgA concentrations may provide a useful index for evaluation of an acute stress response. 相似文献
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本试验证明了TMV-RNA在有细胞核的烟草原生质体中能大量增殖,但在无核的胞质体中却难以增殖。 相似文献
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Kaneko D Komatsu H Ohama T Sato K 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2011,73(8):1001-1005
The effect of trypsin on vascular tone and the cytosolic calcium concentration ([Ca(2+)](i)) of endothelial and smooth muscle cells were examined in the rat aorta. A calcium indicator, fura-PE3, was used to measure [Ca(2+)](i) simultaneously with vascular tone. In the endothelium-intact rat aorta, carbachol and trypsin increased [Ca(2+)](i) in a dose-dependent manner. In the endothelium-denuded rat aorta, carbachol did not change [Ca(2+)](i), but trypsin slightly increased it. Addition of trypsin to the norepinephrine-stimulated rat aorta relaxed the muscle with an additional increase in [Ca(2+)](i). Under calcium-free conditions, trypsin induced a transient increase in [Ca(2+)](i). Trypsin-induced endothelium-dependent relaxation was inhibited by preincubation with l-NMMA, an endothelial NO synthase inhibitor, U-73122, a phospholipase C inhibitor, cyclopiazonic acid, a sarcoplasmic/endoplasmic reticulum Ca(2+)-ATPase blocker, and lanthanum, a nonselective Ca(2+) channel blocker. However, indomethacin, a nonselective cyclooxygenase inhibitor, and SKF-96365, a store-operated Ca(2+)-channel blocker, had no effect on the trypsin-induced relaxation. These results suggest that trypsin increases [Ca(2+)](i) in the endothelial cells through SKF-96365-insensitive Ca(2+) channels and regulates the release of NO, which results in relaxation of the rat aorta. 相似文献
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Nozomi Ytow Humitake Seki Tomomi Mizusaki Shigeaki Kojima Antonio E. Batomalaque 《Water, air, and soil pollution》1994,76(3-4):467-479
Effect of emergent vegetation on the population dynamics of phytoplankton community in Matsumi-ike Bog, a typical bog at the climax stage of limnological succession, was studied. The emergent vegetation grew until August and then withered and collapsed mainly during December and January, supplying the debris of emergent plants into the water column. Population density of the predominant phytoplankton showed sinusoidal fluctuation affected primarily by the water temperature, with various lag phases due to the function of other environmental factors. Shading by the emergent vegetation shifted the initiation of phytoplankton fluctuation earlier. This fluctuation patterns was most obvious among those phytoplankton contain chlorophyll-a and -b, but non -a and-c. The population dynamics were also compared with that of Matsumi-ike Bog at premature stages without (8 yr ago) or with littoral vegetations (3 yr ago). The population density of phytoplankton with chlorophyll-b decreased but those with chlorophyll-c increased, due to the shading effect of the emergent vegetation with the limnological succession of the bog. At the climax of succession, the dynamic state of phytoplankton community has become more stable. 相似文献
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Kenta Shirasawa Daijiro Harada Hideki Hirakawa Sachiko Isobe Chittaranjan Kole 《Breeding Science》2021,71(2):117
Genome sequence analysis in higher plants began with the whole-genome sequencing of Arabidopsis thaliana. Owing to the great advances in sequencing technologies, also known as next-generation sequencing (NGS) technologies, genomes of more than 400 plant species have been sequenced to date. Long-read sequencing technologies, together with sequence scaffolding methods, have enabled the synthesis of chromosome-level de novo genome sequence assemblies, which has further allowed comparative analysis of the structural features of multiple plant genomes, thus elucidating the evolutionary history of plants. However, the quality of the assembled chromosome-level sequences varies among plant species. In this review, we summarize the status of chromosome-level assemblies of 114 plant species, with genome sizes ranging from 125 Mb to 16.9 Gb. While the average genome coverage of the assembled sequences reached up to 89.1%, the average coverage of chromosome-level pseudomolecules was 73.3%. Thus, further improvements in sequencing technologies and scaffolding, and data analysis methods, are required to establish gap-free telomere-to-telomere genome sequence assemblies. With the forthcoming new technologies, we are going to enter into a new genomics era where pan-genomics and the >1,000 or >1 million genomes’ project will be routine in higher plants. 相似文献
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Xiping Cheng Kiyoshi Umeki Tsuyoshi Honjo Daijiro Mizusaki 《Journal of Forest Research》2014,19(1):86-96
We analyzed basal area (BA) growth using growth data obtained from permanent plots over 4 years for five major tree species in Anhui Province, eastern China. The studied species were dominant conifers (Pinus massoniana and Cunninghamia lanceolata) and co-dominant broad-leaved species (Castanopsis eyrei, Castanopsis sclerophylla, and Loropetalum chinense). A hierarchical Bayesian approach was used to estimate species-specific parameters and to quantify a spatially autocorrelated random effect. We selected a model that included only the following relevant predictor variables: initial size, asymmetric competition, spatially autocorrelated random effect, and random effect associated with plots. For all species analyzed, the model accounted for significant proportions of the variation (R 2 = 70–98 %) in BA growth rates. The initial slope of the relationship between BA growth rate and the initial BA tended to be steeper for P. massoniana than for C. lanceolata. The BA growth rate increased from an initial low value and then leveled off, with a lower maximum BA growth rate for C. lanceolata than for P. massoniana. The BA growth rate of P. massoniana was significantly affected by asymmetric competition with neighbors. The results of our analyses were used to predict to what extent thinning neighboring trees at different intensities would reduce competition impacts on BA growth of P. massoniana and C. lanceolata. Our results also helped to clarify the ecological characteristics of the species analyzed, as well as the spatial distribution of unknown factors influencing tree growth. 相似文献
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Hatoya S Kumagai D Takeda S Yamamoto E Nakanishi M Kuwamura M Sugiura K Sasai H Yamate J Inaba T 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2011,73(4):527-530
A 3-year-old, spayed female miniature dachshund was presented for vomiting and anorexia. Thoracic radiographs and CT scan revealed abnormal pulmonary opacities at bilateral caudal lobe. Cytological analysis of the pulmonary mass revealed the presence of large lymphohistiocytic cells and small lymphocytes with occasional neutrophils and plasma cells. An open lung biopsy was performed and a diagnosis of pulmonary lymphomatoid granulomatosis (LYG) was made. The dog was administered CHOP based therapy (modified UW-25), and it survived for 1,022 days after admission. Immunohistochemistry revealed pulmonary lesions consisted of many CD79a positive B cells aggregation and proliferation with prominent angiocentric pattern. This was the first case of canine pulmonary LYG managed by CHOP chemotherapy. 相似文献
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