Bacterial community analysis of purulent material from liver abscesses of crossbred cattle and Holstein steers fed finishing diets with or without tylosin     

Raghavendra G Amachawadi  Wesley A Tom  Michael P Hays  Samodha C Fernando  Philip R Hardwidge  T G Nagaraja 《Journal of animal science》2021,99(4)

Liver abscesses in feedlot cattle are polymicrobial infections. Culture-based studies have identified Fusobacterium necrophorum as the primary causative agent, but a number of other bacterial species are frequently isolated. The incidence of liver abscesses is highly variable and is affected by a number of factors, including cattle type. Holstein steers raised for beef production have a higher incidence than crossbred feedlot cattle. Tylosin is the commonly used antimicrobial feed additive to reduce the incidence of liver abscesses. The objective of this study was to utilize 16S ribosomal RNA amplicon sequence analyses to analyze the bacterial community composition of purulent material of liver abscesses of crossbred cattle (n = 24) and Holstein steers (n = 24), each fed finishing diet with or without tylosin. DNA was extracted and the V3 and V4 regions of the 16S rRNA gene were amplified, sequenced, and analyzed. The minimum, mean, and maximum sequence reads per sample were 996, 177,070, and 877,770, respectively, across all the liver abscess samples. Sequence analyses identified 5 phyla, 14 families, 98 genera, and 102 amplicon sequence variants (ASV) in the 4 treatment groups. The dominant phyla identified were Fusobacteria (52% of total reads) and Proteobacteria (33%). Of the top 25 genera identified, 17 genera were Gram negative and 8 were Gram positive. The top 3 genera, which accounted for 75% of the total reads, in the order of abundance, were Fusobacterium, Pseudomonas, and Bacteroides. The relative abundance, expressed as percent of total reads, of phyla, family, and genera did not differ (P > 0.05) between the 4 treatment groups. Generic richness and evenness, determined by Shannon–Weiner and Simpson’s diversity indices, respectively, did not differ between the groups. The UniFrac distance matrices data revealed no clustering of the ASV indicating variance between the samples within each treatment group. Co-occurrence network analysis at the genus level indicated a strong association of Fusobacterium with 15 other genera, and not all of them have been previously isolated from liver abscesses. In conclusion, the culture-independent method identified the bacterial composition of liver abscesses as predominantly Gram negative and Fusobacterium as the dominant genus, followed by Pseudomonas. The bacterial community composition did not differ between crossbred and Holstein steers fed finishing diets with or without tylosin.  相似文献   

Genetic Variation for Maize Epicuticular Wax Response to Drought Stress at Flowering     

M. Meeks  S. C. Murray  S. Hague  D. Hays  A. M. H. Ibrahim 《Journal of Agronomy and Crop Science》2012,198(3):161-172

Drought stress is thought to promote epicuticular wax accumulation on maize leaves, which reduces plant water loss. We evaluated 62 maize inbred lines and their hybrid testcross progeny for epicuticular wax accumulation on flag leaves at flowering under full and limited irrigation regimes. Extracted wax was measured as a percentage of wax weight to leaf weight (WLW) and leaf area (WLA). Eleven genotypes had above average WLW as both inbred lines and hybrid testcrosses. Thirteen genotypes had above average WLA as either inbred lines or hybrid testcrosses. The drought treatment did not significantly alter WLW or WLA. Heritability of WLW was 0.17 (inbred lines) and 0.58 (hybrid testcrosses). Heritability of WLA was 0.41 (inbred lines) and 0.59 (hybrid testcrosses), suggesting it is a better trait than WLW for epicuticular wax screening. Correlations (r) between inbred lines and their testcross progeny were 0.44 and 0.18, for WLW and WLA, respectively. Heritability of grain weight per ear and plot yield was highest in hybrid testcrosses, with no correlation between inbred and hybrid germplasm. It is not warranted to evaluate epicuticular wax accumulation as the sole drought tolerance mechanism. However, it may be a good secondary trait to observe in relation to grain yield production in hybrids tested under water‐limiting conditions.  相似文献   

Predicting percentage of intramuscular fat using two types of real-time ultrasound equipment     

Hassen A  Wilson DE  Amin VR  Rouse GH  Hays CL 《Journal of animal science》2001,79(1):11-18

In the present study, 500 steers were used to develop models for predicting the percentage of intramuscular fat (PIMF) in live beef cattle. Before slaughter, steers were scanned across the 11th and 13th ribs using Aloka 500V (AL-500) and Classic Scanner 200 (CS-200) machines. Four to five images were collected per individual steer using each machine. After slaughter, a cross-sectional slice of the longissimus muscle from the 12th rib facing was used for chemical extraction to determine actual carcass percentage of intramuscular fat (CPIMF). Texture analysis software was used by two interpreters to select a region for determination of image parameters, which included Fourier, gradient, histogram, and co-occurrence parameters. Four prediction models were developed separately for each of AL-500 and CS-200 based on images captured by the respective machines. These included models developed without transformation of CPIMF (Model I), models based on logarithmic transformation of CPIMF (Model II), ridge regression procedure (Model III), and principal component regression procedure (Model IV). Model R2 and root mean square error of AL-500 Models I, II, III, and IV were 0.72, 0.84%; 0.72, 0.85%; 0.69, 0.91%; and 0.71, 0.86%; respectively. The corresponding R2 and root mean square error values of CS-200 Models I, II, III, and IV were 0.68, 0.87%; 0.70, 0.85%; 0.64, 0.94%; and 0.65, 0.91%; respectively. Initially, AL-500 and CS-200 prediction models were validated separately on an independent data set from 71 feedlot steers. The overall mean bias, standard error of prediction, and rank correlation coefficient across the four AL-500 models were 0.42%, 0.84%, and 0.88, respectively. For the four CS-200 models, the corresponding overall mean values were 0.67%, 0.81%, and 0.91, respectively. In a second validation test, only Model II of AL-500 and CS-200 was evaluated separately based on data from 24 feedlot steers. The overall mean bias, absolute difference, and standard error of prediction of AL-500 Model II were 0.71, 0.92, and 0.98%. For CS-200 Model II, the corresponding values were 0.59, 0.97, and 1.03%. Both AL-500 and CS-200 equipment can be used to accurately predict PIMF in live cattle. Further improvement in the accuracy of prediction equations could be achieved through increasing the development data set and the variation in PIMF of cattle used.  相似文献   

Effect of structure on nitrification of urea derivatives     

Hays JT  Haden WW 《Journal of agricultural and food chemistry》1969,17(5):1077-1079

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Hypervitaminosis A in the young pig     

M D Anderson  V C Speer  J T McCall  V W Hays 《Journal of animal science》1966,25(4):1123-1127

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Cavity Formation in Thin Films of Viscous Liquids     

Hays DF  Feiten JB 《Science (New York, N.Y.)》1963,141(3586):1174-1175

High-speed photography was utilized to observe the dynamic growth behavior of a cavity in a viscous liquid. From these observations it has been shown that a relatively elementary analytical approach will reproduce the general cavity growth characteristics.  相似文献   

Use of positive contrast rhinography and intranasal sinography for diagnosis of a nasofacial sinus tract in a dog     

Cruz-Arámbulo Rde J  Monnet E  Steyn PF  Shelly S  Hays C 《Journal of the American Veterinary Medical Association》2003,222(11):1569-72, 1547

Twelve days after a dog fight, a 2-year-old sexually intact female Bulldog was evaluated because of subcutaneous emphysema of increasing severity throughout the dogs body. Thoracic radiography revealed severe pneumomediastinum from which free air had extended into the retroperitoneal space, resulting in pneumoperitoneum. Tracheoscopic examination did not reveal a discontinuity of the trachea, pharynx, or larynx. A breach between the nasal cavity and subcutaneous tissues of the nasal region was suspected. Further diagnostic investigations included positive contrast rhinography and intranasal sinography. Via an angiographic catheter inserted into the left naris, positive contrast intranasal sinography revealed a sinus tract extending between the left nasal cavity and the subcutaneous tissue of the dorsal aspect of the nasal planum. Resolution of subcutaneous emphysema, pneumomediastinum, and pneumoretroperitoneum began 1 day after surgical closure of the intranasal opening of the sinus tract. To the authors' knowledge, this radiographic technique has not been reported.  相似文献   

Genetic loci linking improved heat tolerance in wheat (<Emphasis Type="Italic">Triticum aestivum</Emphasis> L.) to lower leaf and spike temperatures under controlled conditions     

R. Esten Mason  Suchismita Mondal  Francis W. Beecher  Dirk B. Hays 《Euphytica》2011,180(2):181-194

Heat stress adversely affects wheat production in many regions of the world and is particularly detrimental during reproductive development. The objective of this study was to identify novel quantitative trait loci (QTL) associated with improved heat tolerance in wheat (Triticum aestivum L.) and to confirm previous QTL results. To accomplish this, a recombinant inbred line (RIL) population was subjected to a three-day 38°C daytime heat stress treatment during early grain-filling. At maturity, a heat susceptibility index (HSI) was calculated from the reduction of three main spike yield components; kernel number, total kernel weight, and single kernel weight. The HSI, as well as temperature depression (TD) of the main spike and main flag leaf during heat stress were used as phenotypic measures of heat tolerance. QTL analysis identified 14 QTL for HSI, with individual QTL explaining from 4.5 to 19.3% of the phenotypic variance. Seven of these QTL co-localized for both TD and HSI. At all seven loci, the allele for a cooler flag leaf or spike temperature (up to 0.81°C) was associated with greater heat tolerance, indicated by a lower HSI. In a comparison to previous QTL results in a RIL population utilizing the same source of heat tolerance, seven genome regions for heat tolerance were consistently detected across populations. The genetic effect of combining three of these QTL, located on chromosomes 1B, 5A, and 6D, demonstrate the potential benefit of selecting for multiple heat tolerance alleles simultaneously. The genome regions identified in this study serve as potential target regions for fine-mapping and development of molecular markers for more rapid development of heat tolerant germplasm.  相似文献   

Paleomagnetic study of antarctic deep-sea cores   总被引：1，自引：0，他引：1  

Opdyke ND  Glass B  Hays JD  Foster J 《Science (New York, N.Y.)》1966,154(3747):349-357

The magnetic inclinations and inten sities of about 650 samples from seven deepsea cores taken in the Antarctic were measured on a spinner magnetometer. This series of measurements provided a magnetic stratigraphy, based on zones of normally or reversally polar ized specimens for each core, which was then correlated with the magnetic stra tigraphy of Cox et al. (1). One core (V16-134) gave a continuous record of the paleomagnetic field back to about 3.5 million years. When selected samples were subject ed to alternatingfield demagnetization, most were found to have an unstable component that was removed by fields of 150 oersteds; all samples from two cores were partially demagnetized in a field of 150 oersteds. The average inclination in these two cores was then in good agreement with the average inclination of the ambient field for the latitude of the core site. It was also found that the intensities of the samples decreased at the points of reversal; this finding is to be expected if, as has been postulated by the dynamo theory, the intensity of the dipole field decreases to zero and builds again with opposite polarity. We believe that the magnetiza tion of the cores results from the pres ence of detrital magnetite, although other magnetic minerals also may be present. Four faunal zones (, X, , and ) have been recognized in these Antarctic cores on the basis of upward sequential disappearance of Radiolaria. The faunal boundaries and reversals consistently have the same relations to one another, indicating that they are both timedependent phenomena. Using previously determined times of reversal, one may date the following events in the cores: 1) Radiolarian faunal boundaries:-X, 2 million years; X-, 0.7 million years; -, 0.4 to 0.5 million years. These dates are in good agreement with ages previously extrapolated from radio metric dates. 2) Initiation of Antarctic diatom ooze deposition, approximately 2.0 mil-lion years ago. 3) First occurrence of ice- rafted detritus, approximately 2.5 million years ago. One can also calculate rates of sedi mentation, which vary in the cores studied from 1.1 to about 8.0 millimeters per 1000 years. Sedimentation rates for the Indian Ocean cores are higher than for the Bellingshausen Sea cores. The near coincidence of faunal changes and reversals in the cores suggests but does not prove a causal relation. We conclude from this study that paleomagnetic stratigraphy is a unique method for correlating and dating deep sea cores, and that future work with such cores may provide a complete or nearly complete record of the history of the earth's magnetic field beyond 4 million years.  相似文献   

Variations in the Earth's Orbit: Pacemaker of the Ice Ages   总被引：2，自引：0，他引：2  

Hays JD  Imbrie J  Shackleton NJ 《Science (New York, N.Y.)》1976,194(4270):1121-1132

1) Three indices of global climate have been monitored in the record of the past 450,000 years in Southern Hemisphere ocean-floor sediments. 2) Over the frequency range 10(-4) to 10(-5) cycle per year, climatic variance of these records is concentrated in three discrete spectral peaks at periods of 23,000, 42,000, and approximately 100,000 years. These peaks correspond to the dominant periods of the earth's solar orbit, and contain respectively about 10, 25, and 50 percent of the climatic variance. 3) The 42,000-year climatic component has the same period as variations in the obliquity of the earth's axis and retains a constant phase relationship with it. 4) The 23,000-year portion of the variance displays the same periods (about 23,000 and 19,000 years) as the quasi-periodic precession index. 5) The dominant, 100,000-year climatic [See table in the PDF file] component has an average period close to, and is in phase with, orbital eccentricity. Unlike the correlations between climate and the higher-frequency orbital variations (which can be explained on the assumption that the climate system responds linearly to orbital forcing), an explanation of the correlation between climate and eccentricity probably requires an assumption of nonlinearity. 6) It is concluded that changes in the earth's orbital geometry are the fundamental cause of the succession of Quaternary ice ages. 7) A model of future climate based on the observed orbital-climate relationships, but ignoring anthropogenic effects, predicts that the long-term trend over the next sevem thousand years is toward extensive Northern Hemisphere glaciation.  相似文献