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Ömür Baysal Francesco Mercati Hatice İkten Raziye Çetinkaya Yıldız Francesco Carimi Yeşim Aysan Jaime A. Teixeira da Silva 《Physiological and Molecular Plant Pathology》2011,75(3):113-119
There is no available data published related to the dissemination of bacterial canker caused by Clavibacter michiganensis subsp. michiganensis (Cmm) and its genetic diversity in Turkey. It is important to control new introduced inoculum sources by commercial seeds and seedlings. Pathogens were identified by morphological features and the identity was confirmed by PCR amplification using a specific primer PSA-4, PSA-R in addition to microbiological tests. ISSR markers showing high polymorphism ratios were selected and used to characterize Cmm strains. The collected strains were classified into different groups on the basis of ISSR-PCR fingerprints, which showed remarkable genetic specificity and diversity not previously identified in Cmm, suggesting that genetic differences are related to dissemination of the pathogen in the region. This is the first ever study carried out on the characterization of Cmm using ISSR. The selected ISSR primers to characterize Cmm can be used to determine genetic differences in further studies. 相似文献
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Hatice Şelale Ibrahim Çelik Visam Gültekin Jens Allmer Sami Doğanlar Anne Frary 《Plant Breeding》2013,132(3):344-351
All publicly available opium poppy expressed sequence tag (EST) sequences, totalling 20 885, were assembled into unigenes and examined for simple sequence repeats (SSRs). Nearly 19% of the 14 957 unigenes contained SSRs with 4% harbouring more than one SSR. Average density of the SSRs was 1 SSR per 3.6 kb of non‐redundant EST sequence. Trinucleotide SSRs were most frequently identified (39%), and many of the most prevalent motifs were AT‐rich. Flanking primers were designed for 86% of the SSRs and 67 primer pairs were tested on 37 opium poppy accessions and seven related species. All markers were transferable to the related species. Polymorphism information content (PIC) values for the markers were intermediate for comparisons within opium poppy (average of 0.27) and slightly higher for comparisons across species (average of 0.29). The markers were found to be useful for diversity analysis as they successfully distinguished among Turkish opium poppy accessions and land races. 相似文献
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Hatice Asuman Yılmaz Orhan Tufan Eroldogan 《Journal of the World Aquaculture Society》2011,42(4):522-529
Triplicate groups of gilthead sea bream, Sparus aurata (10.4 g), were distributed among 27 tanks (12 fish per tank) and reared in flow‐through seawater. A factorial experiment (3 × 3) was designed to include a continuously fed control group and two cycled starvation groups: 1 + 3 (starved 1 d, fed 3 d), 1 + 5 (starved 1 d, fed 5 d). Each of the feeding groups was subjected to one of three feeding frequencies (2, 4, and 6 times per day) over the 60‐d experiment duration. The average final weight of fish in 1 + 3 and 1 + 5 groups were significantly lower than that of the control group. Partial compensation was observed in the starved groups subjected to any of the three feeding frequencies. Regardless of the feeding frequency, control fish consumed less feed than the starved groups. The highest body protein content was found in the control group. The rate of oxygen consumption significantly increased 30 min after the feeding and the magnitude of the effect increased with the feeding frequency. These results suggest that the present cycling starvation schedules did not invoke a full compensation in gilthead sea bream. 相似文献
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Serhat Türkmen Orhan Tufan Eroldoğan Hatice Asuman Yılmaz Abdüllatif Ölçülü Gül Ayten Kiriş Inan Zeynep Erçen Nazmi Tekelioğlu 《Aquaculture Research》2012,43(11):1643-1650
The compensatory growth response of the European sea bass (Dicentrarchus labrax) that faced cycling starvation and restricted ration was assessed. Juveniles (10.5 g) were stocked into 15 tanks at a density of 25 fish per tank. Five different feeding regimes were tested on triplicate groups of fish: CSatiation: control fed for 60 days without deprivation, CRestricted: 25% restricted feeding, S‐R: 1 day starvation then 4 days CRestricted feeding, R‐F: 1 day CRestricted feeding then 4 days CSatiation feeding, and, finally, S‐F: 1 day starvation then 4 days CSatiation feeding. The specific growth rate of fish in the CSatiation (2.5 ± 0.06% day?1), S‐F (2.5 ± 0.11% day?1) and R‐F (2.4 ± 0.18% day?1) were significantly higher than that of CRestricted (2.2 ± 0.05% day?1) or S‐R (2.0 ± 0.01% day?1). Fish in S‐F group were able to achieve catching up with the CSatiation. There was no significant difference in feed conversion rates but R‐F and S‐F consumed approximately 34% more feed than CSatiation following the first re‐feeding day. Although, the highest lipid content was observed in CSatiation (14.4%), S‐R (33.3% dry matter) had the highest water content compared with the CSatiation and CRestricted (37.8% and 36.9% dry matter respectively). In conclusion, it may be concluded that sea bass has rapid response to cycling starvation/re‐feeding and that a 25% restricted feeding ratio is insufficient to invoke a compensatory growth response in sea bass. 相似文献
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Hilal Ozkilinc Kamil Sarpkaya Sener Kurt Canan Can Hatice Polatbilek Aysegul Yasar Unal Sevinc Aysun Uysal Fatma Konukoglu 《Phytoparasitica》2017,45(5):719-728
Alternaria genus includes many plant pathogens on numerous hosts, causing leaf spots, rots and blights. Alternaria blight has been observed as one of the important fungal diseases of pistachio (Pistacia vera L.) as well as its wild relatives (P. terebinthus, P. lentiscus, P. khinjuk, P. atlantica, P. mutica) in Turkey. Alternaria species were sampled from Pistacia spp. hosts from different geographic regions in Turkey during field trips in late spring to early fall of 2013. Alternaria blight symptoms were observed mainly on fruits and rarely on leaves. Four hundred and twenty two of the isolates were morphologically defined as A. alternata, A. tenuissima, A. arborescens and also intermediate morpho-species between A. alternata/A. arborescens. Pathogenicity of the isolates was confirmed with host inoculations on detached fruits. Mating types of 270 isolates of Alternaria spp. from the collection were identified using a PCR-based mating type assay that amplifies either a MAT1-1 or a MAT1-2 fragment from the mating locus. Although a strongly clonal population structure was expected due to the putative asexual reproduction of these fungi, both idiomorphs were detected at equal frequencies at several different spatial scales. The distribution of mating types within each geographic region, within host species as well as in overall collection was not significantly different from 1:1. Amplified fragments of partial idiomorph sequences were obtained for representative isolates. Parsimony trees were depicted based on sequence data of mating type genes for these representative isolates as well as some other Alternaria species obtained by Genebank. Several point mutations presented a few clusters which are supported by high bootsrapped values. The Alternaria blight disease agents both from cultivated and wild hosts were pathogenic on pistachio which may cause difficulties to control the disease because of extensity of pathogen sources. Besides, equal mating type distribution of the pathogen at both geographic and host species levels suggests a potential for sexual reproduction of Alternaria spp. in Turkey. 相似文献
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Hatice Gulen Ahmet Ipek Sergul Ergin Emin Akcay Atilla Eris 《The Journal of Horticultural Science and Biotechnology》2013,88(5):427-431
SummaryThe characterisation of sweet cherry (Prunus avium L.) genetic resources in Turkey may help to increase their use in breeding programmes worldwide, as Turkey is the centre of origin of sweet cherry. Amplified fragment length polymorphism (AFLP) and simple sequence repeat (SSR) markers were therefore used to analyse genetic diversity among a total of 78 local and introduced sweet cherry cultivars. Four AFLP primer combinations, and six SSR primer pairs for sweet cherry were used for genetic diversity analysis. A genetic similarity matrix was calculated using the combined data from AFLP and SSR analyses with simple matching coefficient. Genetic similarities among the sweet cherry genotypes studied were higher than 42%. No two accessions had an identical AFLP and SSR marker profile, indicating that all 78 genotypes were unique. An UPGMA dendrogram, based on the similarity matrix, revealed 18 separate Groups at or above the 70% similarity level. While some Groups consisted of both introduced and local genotypes, other Groups had only local genotypes. This result suggests that there was broad genetic diversity among the local Turkish sweet cherry genotypes, which was not present in the introduced sweet cherry accessions. The genetic variation present in local Turkish sweet cherry genotypes may be useful for future breeding programmes. We found that the use of both SSR and AFLP marker systems was effective for distinguishing between genetically-close sweet cherry genotypes. These marker systems can be used to complement pomological and morphological markers during the characterisation and identification of sweet cherry genotypes. 相似文献
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Orhan Corum Duygu Durna Corum Orkun Atik Hatice Eser Faki Feray Altan Kamil Uney 《Journal of veterinary pharmacology and therapeutics》2019,42(2):207-213
The aim of the present study was to determine the pharmacokinetics (PKs) and bioavailability of danofloxacin in chukar partridge (Alectoris chukar) following intravenous (IV), intramuscular (IM), subcutaneous (SC), and oral (PO) administrations at a dose of 10 mg/kg. A total of eight clinically healthy chukar partridges weighing 480 ± 45 g were used for the investigation. The study was performed in a crossover design (2 × 2 × 2 × 2) with a 15‐day washout period between two administrations in four periods. The plasma concentrations of danofloxacin were determined using reversed‐phase high‐performance liquid chromatography. Noncompartmental PK parameters were also estimated. No local or systemic adverse drug effects were observed in any of the chukar partridges. The mean elimination half‐life ranged between 8.18 and 12.08 hr and differed statistically among administration routes. The mean peak plasma concentrations of danofloxacin following IM, SC, and PO administrations were 8.05, 9.58, and 3.39 μg/ml at 0.5, 1, and 4 hr, respectively. Following IM, SC, and PO administrations, the mean bioavailability was 86.33%, 134.40%, and 47.62%, respectively. The mean total clearance and volume of distribution at steady‐state following IV administration were 0.13 L hr?1 kg?1 and 0.96 L/kg, respectively. These data, including favorable PKs and the absence of adverse drug effects, suggest that danofloxacin is a useful antibiotic in chukar partridges. 相似文献
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Gene effects of Cicer reticulatum on qualitative and quantitative traits in the cultivated chickpea 
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下载免费PDF全文 The gene effects of Cicer reticulatum on both double‐podding as qualitative traits and yield criteria as quantitative traits in interspecific hybridization with cultivated chickpea (Cicer arietinum) have not yet been elucidated, despite the easy acquisition of hybrid progeny between two species. This study sought to answer three questions concerning qualitative and quantitative traits in reciprocal crosses between C. arietinum and C. reticulatum. (i) Is there a similarity in the gene effects of flower colour, pigmentation and double‐podded traits in reciprocal interspecific crosses? (ii) What are the expressivity and penetrance of the double‐podded trait in interspecific crosses? (iii) Which heterosis predicts the occurrence and the extent of transgressive variation? The materials for this study were F1, F2 and F3 progeny derived from a reciprocal cross between C. arietinum and C. reticulatum. As qualitative traits, purple flower colour, pigmentation and single‐podded traits in C. reticulatum were governed by a dominant single gene. Purple flower colour and pigmentation were detected to be linked traits as all progeny had the same phenotypes. As quantitative traits, yield criteria in progeny which were double‐podded had higher values than the single‐podded counterparts. Expressivity and penetrance of the double‐podding trait were superior in progeny derived from C. reticulatum × C. arietinum. The results showed that fruitful heterosis was more useful than residual heterosis in F3 as residual heterosis was mostly negative and fruitful heterosis was suggested in self‐pollinated species such as chickpea that lacks inbreeding depression. Interspecific transgression was significant with respect to chickpea improvement because it represented a potential source of novel genetic variation. 相似文献
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Sixty white male mice were used in this study. Three groups, each comprising 20 mice were established. The control group (Group 1) was provided ad libitum pellet feed. On the other hand, the experimental groups, namely, Groups 2 and 3 were given pellet feed containing deltamethrin throughout the day, so that the animals were administered doses of 7.5 and 30 mg/kg/body weight/day, respectively. Blood samples were collected from all groups on the 15th, 30th, 45th, and 60th days of the experiment for measurement of serum glutamate oxaloacetate transaminase (SGOT), serum glutamate pyruvate transaminase (SGPT), alcaline phosphatase (ALP), amylase and cholinesterase activities, and levels of glucose, urea, creatinine, triglyceride, cholesterol, calcium, phosphor, sodium, potassium, and chloride. According to data obtained, on the 15th day of the study, compared to the control group, statistically significant increase in urea, cholesterol, ALP, cholinesterase, calcium, and potassium levels/activities, and significant decrease in SGOT activity and chloride levels in Group 2, and significant increase in cholesterol, ALP, cholinesterase, calcium, potassium and chloride levels/activities in Group 3, and significant decrease in SGOT activity in Group 3 were determined. On the 30th day of the study, in comparison to the control group, triglyceride and cholesterol levels and ALP activity were determined to be significantly increased in the Group 2, whereas SGOT activity were significantly reduced in Group 2, and triglyceride and cholesterol levels were demonstrated to be significantly increased and SGOT activity was significantly reduced in Group 3. On the 45th day of the study, compared to the controls, significant increase in cholesterol and sodium levels, and significant decrease in triglyceride levels and ALP activity in Group 2, significant increase in creatinine, cholesterol and sodium levels and cholinesterase activity, and significant decrease in glucose, SGPT, ALP and phosphor levels/activities were detected in Group 3. On the 60th day, in other words, in the last period of the study, ALP activity, and triglyceride, calcium, and phosphor levels were determined to be significantly increased and significant decrease in amylase activity in Group 2. Furthermore, significant increase in triglyceride, ALP, amylase, calcium, phosphor, and potassium levels/activities, and significant decrease in glucose and creatinine levels were observed in Group 3. However no correlation was determined to exist between the changes were found to be statistically significant, and the administration dose and duration of deltamethrin in all periods and groups. 相似文献