Improved genetic parameter estimations in zoysiagrass by implementing post hoc blocking     

Lin Xing  Salvador Gezan  Kevin Kenworthy  J. Bryan Unruh  Patricio Munoz 《Euphytica》2017,213(8):195

Randomized complete block (RCB) design is the most widely used experimental design in biological sciences. As number of treatments increases, the block size become larger and it looses the capacity to control the variance within block, which is its original purpose. A method known as post hoc blocking could be used in these cases to improve the genetic parameter estimation and thus obtain an unbiased assessment of the performance of a given treatment. In trufgrass breeding, as other breeding program, this is a common challenge. The goal of this study was to test the capacity of different post hoc blocking designs to improve the genetic parameter estimation of zoysiagrass (Zoysia spp.). We evaluated two post hoc blocking designs; row–column (R–C) and incomplete block (IB) designs on five genotype trials located in Florida. The results showed that post hoc R–C design had superior model fitting than both the original RCB and the post hoc IB designs when studied at the single measurement level and at the site level. The narrow-sense heritability (0.24–0.40) and the genotype-by-measurement correlation (0.57–0.99) did not change significantly when R–C was compared to the original RCB design. The ranking of the top performing genotypes changed considerably when comparing RCB to R–C design, but the degree depended on the location analyzed. We conclude that the change in the ranking of the top (potentially select individuals) is coming from the better control of intra-block environmental variation, and this could potentially have a significant impact on the breeding selection process.  相似文献   

Mycorrhiza induced resistance in potato plantlets challenged by Phytophthora infestans     

Adrien Gallou  Hernán Patricio Lucero Mosquera  Sylvie Cranenbrouck  Juan Pablo Suárez  Stéphane Declerck 《Physiological and Molecular Plant Pathology》2011,76(1):20-26

Biological control of soil-borne pathogens by arbuscular mycorrhizal (AM) fungi has been repeatedly demonstrated. However, their role in the control of above-ground hemibiotrophic pathogens is less conclusive. Here, we investigated in vitro the impact of an AM fungus on Phytophthora infestans in potato plants. The leaf infection index was decreased in mycorrhizal potato plants. Real-Time Quantitative PCR revealed the induction of two pathogenesis related genes (PR1 and PR2) in the leaves of mycorrhizal plants shortly after infection with P. infestans. These results suggested a systemic resistance in mycorrhizal plants, related to the priming of the two PR genes in potato.  相似文献   

Is the decline of birds and amphibians in a steppe lake of northern Patagonia a consequence of limnological changes following fish introduction?     

Silvia Ortubay  Víctor Cussac  Miguel Battini  Juan Barriga  Juana Aigo  Marcelo Alonso  Patricio Macchi  Mariana Reissig  Joy Yoshioka  Stanley Fox 《水产资源保护:海洋与淡水生态系统》2006,16(1):93-105

• 1. Laguna Blanca, in Laguna Blanca National Park, is a lake in Patagonia which has been designated as a Ramsar site since 1971 because of bird diversity and abundance and importance for nesting, particularly for the black neck swan, Cygnus melanocoryphus. It is also valued for its populations of endemic amphibians, Atelognathus patagonicus and Atelognathus praebasalticus.
• 2. Avian and amphibian populations have decreased dramatically in recent years. Percichthys colhuapiensis, Percichthys trucha (Pisces, Percichthyidae), Salmo trutta and Oncorhynchus mykiss (Pisces, Salmonidae) were introduced into Laguna Blanca in 1965. Since 1986, no Atelognathus frogs have been found. The abundance of swans and coots, which are strongly associated with macrophytes for nesting and feeding, has diminished drastically, whereas piscivorous birds have increased.
• 3. The fishless condition of some neighbouring small lakes with abundant pond weeds, aquatic birds and endemic amphibians, was assessed in order to compare the physical and chemical characteristics and the quantitative composition of the benthos among lakes. Fish presence at Laguna Blanca and its absence at El Burro, Antiñir and Jabón lakes, were confirmed. Compared with previous results, it seems that the abundance of Amphipoda (Hyalella), Copepoda and Cladocera at Laguna Blanca has decreased, while Acari has increased and Notostraca has disappeared. Water transparency has diminished in Laguna Blanca and now is lower than that of fishless lakes.
• 4. P. colhuapiensis were captured only in Laguna Blanca, with the highest captures in the littoral zone. The population shows rapid individual growth in the early years and an absence of fish older than 6 years. The preponderance of benthos and the presence of macrophytes in the gut contents of adult P. colhuapiensis appear to indicate that they are important consumers of these resources.
• 5. This paper concludes that fish introduction in Laguna Blanca led to a complex trophic cascade effect (fish predation on tadpoles, fish competition for avian food, bottom disturbance, zooplankton reduction) producing deleterious effects on the amphibian and bird populations.

Copyright © 2006 John Wiley & Sons, Ltd.  相似文献   

Climate Variability and Oceanographic Settings Associated with Interannual Variability in the Initiation of Dinophysis acuminata Blooms     

Patricio A. Díaz  Beatriz Reguera  Manuel Ruiz-Villarreal  Yolanda Pazos  Lourdes Velo-Suárez  Henrick Berger  Marc Sourisseau 《Marine drugs》2013,11(8):2964-2981

In 2012, there were exceptional blooms of D. acuminata in early spring in what appeared to be a mesoscale event affecting Western Iberia and the Bay of Biscay. The objective of this work was to identify common climatic patterns to explain the observed anomalies in two important aquaculture sites, the Galician Rías Baixas (NW Spain) and Arcachon Bay (SW France). Here, we examine climate variability through physical-biological couplings, Sea Surface Temperature (SST) anomalies and time of initiation of the upwelling season and its intensity over several decades. In 2012, the mesoscale features common to the two sites were positive anomalies in SST and unusual wind patterns. These led to an atypical predominance of upwelling in winter in the Galician Rías, and increased haline stratification associated with a southward advection of the Gironde plume in Arcachon Bay. Both scenarios promoted an early phytoplankton growth season and increased stability that enhanced D. acuminata growth. Therefore, a common climate anomaly caused exceptional blooms of D. acuminata in two distant regions through different triggering mechanisms. These results increase our capability to predict intense diarrhetic shellfish poisoning outbreaks in the early spring from observations in the preceding winter.  相似文献   

Genetic variation of sweet potatoes (Ipomoea batatas L.) cultivated in Chile determined by RAPDs   总被引：1，自引：0，他引：1  

Boris Sagredo  Patricio Hinrichsen  Horacio López  Alberto Cubillos  Carlos Muñoz 《Euphytica》1998,101(2):193-198

RAPD (randomly amplified polymorphic DNA) technology was applied to analyze the genetic variability of sweet potato germplasm existing in Chile and elsewhere. Analysis of 28 cultivars from all over the world showed polymorphic bands with all 18 primers tested. A total of 124 RAPD bands were scored with an average of 6.9 polymorphic bands per primer. These results confirm that sweet potato exhibits high genetic variation. Two groups were distinguished: one containing Peruvian cultivars, and another containing cultivars from the rest of the world. Analysis of 14 accessions from Central Chile and one from Northern Chile showed polymorphic bands with 24 of 26 primers tested, but almost all of the 140 polymorphic bands merely showed the distinctness of the Northern accession. The almost complete uniformity of the other 14 accessions shows that sweet potato germplasm collected in Central Chile has very little genetic variability and may be derived from a single cultivar. Based on these results and on historical records, some hypotheses are proposed to explain the origin of sweet potatoes cultivated in Chile. This revised version was published online in July 2006 with corrections to the Cover Date.  相似文献   

Enhanced resistance to bacterial infection byErwinia carotovora subsp.atroseptica in transgenic potato plants expressing the attacin or the cecropin SB-37 genes     

Patricio Arce  Mauricio Moreno  Mónica Gutierrez  Marlene Gebauer  Paola Dell’Orto  Hebert Torres  Ivette Acuña  Pauline Oliger  Alejandro Venegas  Xavier Jordana  Julio Kalazich  Loreto Holuigue 《American Journal of Potato Research》1999,76(3):169-177

Blackleg and soft rot diseases, caused by the bacteriumErwinia carotovora, are among the diseases that cause important losses in culture and storage of potato. In this paper, we introduced bacterial resistance into potato, via genes encoding for proteins with antibacterial activity. For this purpose, potato clones were transformed either with the gene encoding the acidic attacin protein fromHyalophora cecropia, or with the gene encoding the cecropin analog peptide SB37. These clones were evaluated for soft rot and blackleg resistance, after inoculation with the bacterial strainErwinia carotovora subsp.atroseptica T7. Results reported in this paper indicate that a considerable percentage of the potato clones (15–22%) showed increased resistance to bacterial infection, revealed by reduced severity of blackleg or soft rot symptoms. Expression of the transgenes was demonstrated in some of the clones by Northern blot analysis. This is the first report indicating that expression of the gene encoding for an attacin protein and for the cecropin SB-37 peptide in transgenic potato confers increased resistance to bacterial infection.  相似文献   

Survival of Post‐larval Litopenaeus vannamei Following Acclimation to Low Salinity Waters at Different Temperatures     

Patricio E. Paz  Luke A. Roy  D. Allen Davis  Herbert E. Quintero 《Journal of the World Aquaculture Society》2011,42(4):575-579

Temperature and salinity are two factors known to influence the growth potential and survival of the Pacific white shrimp, Litopenaeus vannamei, acclimated to low salinity waters. In west Alabama, farmers suspect low water temperatures at stocking, in conjunction with low salinity and suboptimal ionic profiles, might be responsible for reduced survival and production at harvest. To determine the influence of temperature and salinity on post‐larval (PL) L. vannamei, a series of bioassays were conducted at the E.W. Shell Fisheries Research Station in Auburn, Alabama and Claude Peteet Mariculture Center in Gulf Shores, Alabama. PL L. vannamei of ages 11, 13, and 20 (PL₁₁, PL₁₃, and PL₂₀) were acclimated down to salinities of 12, 4, 2, 1, 0.5, and 0.2 ppt at different temperatures ranging from 17.6 to 24.0 C. During the acclimation bioassays survivals were assessed at 24 and 48 h. PL survival of the three age groups examined were significantly reduced at salinities of 1, 0.5, and 0.2 ppt. These results correspond well to those reported at higher temperatures confirming that across the tested temperature range salinity endpoint was the driving factor in determining survival and that suboptimal temperatures had a minimal influence on survival.  相似文献   

Incorporation of Whole Lupin,Lupinus albus,Seed Meal in Commercial Extruded Diets for Rainbow Trout,Oncorhynchus mykiss: Effect on Growth Performance,Nutrient Digestibility,and Muscle Fatty Acid Composition     

Aliro S. Bórquez  Adrián J. Hernández  Patricio Dantagnan  Patricio Saez  Edison Serrano 《Journal of the World Aquaculture Society》2011,42(2):209-221

Whole lupin seed meal was evaluated as partial replacement for fishmeal in extruded diets for rainbow trout, with particular emphasis on the effect on growth performance and apparent digestibility coefficient (ADC) of protein, lipids, carbohydrates, and energy. Effect on muscle fatty acid composition was also evaluated. All diets were formulated to be isonitrogenous and isoenergetic and to contain approximately 45% crude protein and 5.5 kcal energy g/diet. Diets were formulated to include whole lupin seed meal at 0, 10, 15, and 20%. Triplicate groups of fish weighing 65.9 ± 15.1 g on average were fed twice a day until apparent satiation during 12 wk. Growth, feed intake, hepatosomatic index, hepatic histology, proximate composition of whole body, and muscular fatty acid profile were determined. Growth and feed utilization were similar in all treatments and whole‐body composition did not vary among treatments. Polyunsaturated fatty acids of the n‐6 and n‐3 series remained constant in muscle as the amount of lupin in diets increased. Furthermore, the ADCs were similar among all diets. These results suggest that inclusion of whole lupin seed meal up to 20% in extruded diets for rainbow trout do not have any negative effect on growth, feed performance, or flesh quality.  相似文献   

Soil water recharge in a semi-arid temperate climate of the Central U.S. Great Plains     

Patricio Grassini  Jinsheng You  Kenneth G. Cassman 《Agricultural Water Management》2010,97(7):1063-1140

The amount of soil water at the beginning of the growing season has a large impact on crop yields in rainfed agriculture, especially in semi-arid regions and in years with below-average rainfall in more humid climates. Robust algorithms are needed to estimate soil water storage before planting to aid crop management decisions. The main objectives of this paper are to investigate soil water recharge during the non-growing season (October 20 to May 1) in a semi-arid, temperate ecosystem in south-central Nebraska (USA) and to evaluate empirical models to estimate soil water content at the beginning of the summer-crop growing season. A database of soil water content measurements collected over 5 years at nine locations in south-central Nebraska was used to estimate available water-holding limits in the soil profile and to determine the change in available soil water during the non-growing season. Regression analysis was performed to analyze the relationship among soil water recharge, residual soil water (i.e., soil water content at the end of the previous growing season), total precipitation, and available water-holding capacity (AWHC) in the root zone to 1.5 m. Precipitation storage efficiency (PSE) was calculated as the quotient of soil water recharge and total non-growing season precipitation. Predictive models to estimate soil water content at the beginning of summer-crop growing season were derived from these analyses. A large portion of the variation in soil water recharge was explained by residual soil water and precipitation. PSE averaged 28% across site-years; low PSE values were associated with high residual soil water and/or low AWHC. Two predictive models (linear and linear-plateau) that used residual soil water, total precipitation, and AWHC as independent variables explained 75-80% of the variation in the measured soil water content at the beginning of the summer-crop growing season. These empirical models represent a new tool to estimate soil water content by planting date of summer crops. Site-management conditions such as residue amount and its architecture, tillage system, soil texture, and terrain slope are not currently accounted for in these models and would likely improve predictive capacity.  相似文献   

Hydraulic Retention Time Influence on Improving Flocculation in the Activated Sludge Processes Through Polyelectrolytes     

Cristina E. Almeida-Naranjo  Patricio J. Espinoza-Montero  Marcelo I. Muñoz-Rodríguez  Cristina A. Villamar-Ayala 《Water, air, and soil pollution》2017,228(7):253

Hydraulic retention time (HRT) influence improving sludge flocculation with adding the polyelectrolytes (non-ionic, anionic, and cationic) was studied on an activated sludge (AS) system fed with synthetic domestic wastewater (SDW), dairy industry wastewater (DIW), and caramel industry wastewater (CIW). The sludge volumetric index, food/microorganism ratio (F/M), and mixed liquor volatile suspended solids at different HRTs (6, 8 and 10 h) were monitored on an experimental model. Results showed that both SDW and IW had the best sludge flocculation conditions at 8 h and 100 mL of non-ionic polyelectrolyte (0.2 mg L^?1). In addition, this phenomenon reached the organic matter removal efficiencies of 95.9, 95.7, and 94.2% for SDW, DIW, and CIW, respectively. Therefore, optimum HRT increased the organic matter removal efficiencies by 10%, sludge concentration by 37% (22–55%), and F/M ratio by 70%. Moreover, the polyelectrolytes used in AS improved the sludge flocculation by 2.9 times.  相似文献