Large‐scale patterns of fish diversity and assemblage structure in the longest tropical river in Asia          下载免费PDF全文

Ratha Chea  Sovan Lek  Pengbun Ngor  Gaël Grenouillet 《Ecology of Freshwater Fish》2017,26(4):575-585

Although the Mekong River is one of the world's 35 biodiversity hot spots, the large‐scale patterns of fish diversity and assemblage structure remain poorly addressed. This study aimed to investigate the fish distribution patterns in the Lower Mekong River (LMR) and to identify their environmental determinants. Daily fish catch data (i.e. from December 2000 to November 2001) at 38 sites distributed along the LMR were related to 15 physicochemical and 19 climatic variables. As a result, four different clusters were defined according to the similarity in assemblage composition and 80 indicator species were identified. While fish species richness was highest in the Mekong delta and lowest in the upper part of the LMR, the diversity index was highest in the middle part of the LMR and lowest in the delta. We found that fish assemblages changed along the environmental gradients and that the main drivers affecting the fish assemblage structure were the seasonal variation of temperature, precipitation, dissolved oxygen, pH and total phosphorus. Specifically, upstream assemblages were characterised by cyprinids and Pangasius catfish, well suited to low temperature, high dissolved oxygen and high pH. Fish assemblages in the delta were dominated by perch‐like fish and clupeids, more tolerant to high temperatures, and high levels of nutrients (nitrates and total phosphorus) and salinity. Overall, the patterns were consistent between seasons. Our study contributes to establishing the first holistic fish community study in the LMR.  相似文献   

Optimization of carbon stock models to local conditions using farmers' soil tests: A case study with AMGv2 for a cereal plain in central France     

Benjamin Nowak  Gaëlle Marliac 《Soil Use and Management》2020,36(4):633-645

Soil organic carbon (SOC) is associated with environmental benefits and crop productivity; therefore, monitoring of SOC stocks is important when assessing the sustainability of agricultural systems. This study applied a hybrid method and the results of on-farm soil tests to calibrate the AMGv2 model and adapt it to local conditions. The method was applied to soils in the Limagne plain (France), which shifted to cereal production since the 1960s. Based on analysing 988 soil test data, covering the period from 1954 to 2019, it was found that SOC stocks showed a significant decrease in the three main soil types of the study area. An optimization procedure estimated that the initial ratios of stable to total carbon fall in the ranges 0.42 and 0.46 for vertisols, 0.48 and 0.52 for calcisols, and 0.56 and 0.60 for fluvisols. Simulations using these values estimated that SOC stocks declined between 1960 and 2018 by between −31 and −17%, depending on soil type. The optimized model was used to forecast the evolution of SOC stocks up to 2050. These simulations showed a further decline in SOC stocks with continuation of current practices, even assuming a 15% increase in crop yields. They indicated that stopping straw exports would stabilize stocks, while a systematic introduction of cover crops would increase stocks about 3.8% over the period considered. It is concluded that this hybrid procedure can improve the adaptation of predictive models to local conditions.  相似文献   

Catalog of Micro-Tom tomato responses to common fungal, bacterial, and viral pathogens     

Hideki Takahashi  Ayano Shimizu  Tsutomu Arie  Syofi Rosmalawati  Sumire Fukushima  Mari Kikuchi  Yasufumi Hikichi  Ayami Kanda  Akiko Takahashi  Akinori Kiba  Kohei Ohnishi  Yuki Ichinose  Fumiko Taguchi  Chihiro Yasuda  Motoichiro Kodama  Mayumi Egusa  Chikara Masuta  Hiroyuki Sawada  Daisuke Shibata  Koichi Hori  Yuichiro Watanabe 《Journal of General Plant Pathology》2005,71(1):8-22

Lycopersicon esculentum cultivar Micro-Tom is a miniature tomato with many advantages for studies of the molecular biology and physiology of plants. To evaluate the suitability of Micro-Tom as a host plant for the study of pathogenesis, Micro-Tom plants were inoculated with 16 well-known fungal, bacterial, and viral pathogens of tomato. Athelia rolfsii, Botryotinia fuckeliana, Oidium sp., Phytophthora infestans, and Sclerotinia sclerotiorum caused typical symptoms and sporulated abundantly on Micro-Tom. Micro-Tom was resistant to Alternaria alternata, Corynespora cassiicola, and Fusarium oxysporum. When Micro-Tom was inoculated with 17 isolates of Ralstonia solanacearum, many isolates induced wilt symptoms. Agrobacterium tumefaciens also was pathogenic, causing crown galls on stem tissue after needle prick inoculation. In Micro-Tom sprayed with Pseudomonas syringae pv. tomato, P. s. pv. tabaci, or P. s. pv. glycinea, bacterial populations did not increase, and yellow lesions appeared only on leaves sprayed with P. s. pv. tomato. Tomato mosaic virus, Tomato aspermy virus, and Cucumber mosaic virus systemically infected Micro-Tom, which developed symptoms characteristic of other cultivars of tomato after infection with the respective virus. These results indicated that Micro-Tom was generally susceptible to most of the important tomato pathogens and developed typical symptoms, whereas certain pathogens were restricted by either hypersensitive resistance or nonhost resistance on Micro-Tom. Therefore, an assortment of Micro-Tom–pathogen systems should provide excellent models for studying the mechanism of susceptible and resistant interactions between plants and pathogens.  相似文献   

Genomic characterization of the first oral avian papillomavirus in a colony of breeding canaries (<Emphasis Type="Italic">Serinus canaria</Emphasis>)     

Daniel A. Truchado  Michaël A. J. Moens  Sergio Callejas  Javier Pérez-Tris  Laura Benítez 《Veterinary research communications》2018,42(2):111-120

Papillomaviruses are non-enveloped, DNA viruses that infect skin and mucosa of a wide variety of vertebrates, causing neoplasias or simply persisting asymptomatically. Avian papillomaviruses, with six fully sequenced genomes, are the second most studied group after mammalian papillomaviruses. In this study, we describe the first oral avian papillomavirus, detected in the tongue of a dead Yorkshire canary (Serinus canaria) and in oral swabs of the same bird and other two live canaries from an aviary in Madrid, Spain. Its genome is 8,071 bp and presents the canonical papillomavirus architecture with six early (E6, E7, E1, E9, E2, E4) and two late open reading frames (L1 and L2) and a long control region between L1 and E6. This new avian papillomavirus L1 gene shares a 64% pairwise identity with FcPV1 L1, so it has been classified as a new species (ScPV1) within the Ethapapillomavirus genus. Although the canary died after showing breathing problems, there is no evidence that the papillomavirus caused those symptoms so it could be part of the oral microbiota of the birds. Hence, future investigations are needed to evaluate the clinical relevance of the virus.  相似文献   

Aboveground biomass,transpiration and water use efficiency in eucalypt plantation fertilized with KCl,NaCl and phonolite rock powder     

de Toledo  Fábio Henrique S. F.  de Moraes Gonçalves  José Leonardo  Mariño  Yesid Alejandro  de Vicente Ferraz  Alexandre  de Oliveira Ferreira  Eric Victor  Moreira  Gabriela Gonçalves  Hakamada  Rodrigo  de Arthur Júnior  José Carlos 《New Forests》2020,51(3):469-488

Potassium has important physiological functions in eucalypt plantations, increasing their productivity when applied to soil via mineral fertilizers. There is interest in identifying alternative sources to KCl owing to its high cost and limited reserves. The aim of the study was to test the effect of replacing KCl with NaCl and phonolite rock powder. Two comparisons were made: (1) application of 283 kg ha^?1 of KCl compared with that of 2125 kg ha^?1 of phonolite rock powder (equivalent to 170 kg ha^?1 of K₂O in both treatments); (2) application of 139 kg ha^?1 of NaCl compared with that of 183 kg ha^?1 of KCl (equivalent to 2.33 kmol Na and K, respectively). Radial growth, soil water content, leaf water potential (Ψ), accumulated transpiration, stem volume and biomass increment, as well as water use efficiency (WUE) were evaluated. In the first comparison, both fertilizations presented equal values for all characteristics evaluated. In the second, the accumulated transpiration in trees fertilized with KCl was 17% higher than that in plants fertilized with NaCl. In contrast, the WUE was 20% higher in the trees fertilized with NaCl than in those fertilized with KCl, reflecting the lower water consumption for the same increment in stem volume and biomass. We conclude that phonolite rock powder and NaCl are possible substitutes for conventional K fertilization performed with KCl.

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Influence of larval and juvenile life history on age at first maturity in two tropical amphidromous fish species     

Raphaël Lagarde  Nils Teichert  Henri Grondin  Thomas Hue  Philippe Gaudin  Dominique Ponton 《Ecology of Freshwater Fish》2020,29(1):63-73

This study investigates how age at first maturity of two tropical amphidromous species Sicyopterus lagocephalus (Pallas, 1770) and Cotylopus acutipinnis (Guichenot, 1863) varies in relation to their larval and juvenile life history. Reproductive stage was estimated based on histological observation of ovaries of more than 200 females of each species caught monthly over 1 year. The age of fish was estimated by interpreting the daily increments deposited on otoliths during the oceanic larval phase, and the juvenile phase in the river. The age at first maturity was approximately 9 months for S. lagocephalus and 7 months for C. acutipinnis, corresponding to approximately 70–130 and 90–130 days after they returned to freshwater respectively. For both species, the time spent in freshwater before maturity was significantly influenced by the duration of the pelagic larval stage at sea (PLD) and the season of return in freshwater. Individuals with a long PLD, or returning in freshwater during the warmer season, maturated faster once in freshwater. This reproductive advantage may minimise the risk of extirpation due to catastrophic events at each generation and thus probably benefits amphidromous species living in very unpredictable tropical rivers.  相似文献   

Candidate gene expression and coding sequence variants in Warmblood horses with myofibrillar myopathy     

Zoë J. Williams  Deborah Velez-Irizarry  Jessica L. Petersen  Julien Ochala  Carrie J. Finno  Stephanie J. Valberg 《Equine veterinary journal》2021,53(2):306-315

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Adjusted method of penis fixation during boar semi-automatic semen collection aiming to reduce bacterial contamination     

Aline Fernanda Lopes Paschoal  Ana Paula Gonçalves Mellagi  Cristina Vicenti Ferrari  Karine Ludwig Takeuti  Gabriela da Silva Oliveira  Mari Lourdes Bernardi  Rafael da Rosa Ulguim  Fernando Pandolfo Bortolozzo 《Reproduction in domestic animals》2021,56(6):897-904

Semen collection has an essential role in the initial bacterial load in boar ejaculates and extended semen. The study aimed to explore the efficacy of an adjusted penis fixation in a semi-automatic collection system on reducing bacterial contamination of ejaculates in two-boar studs with different scenarios. Historically, stud A had low levels of bacterial load in raw semen, while stud B had a high level of contamination. A total of 56 mature boars had their semen collected using two methods of penis fixation: (a) Traditional: The penis was fixed directly with the artificial cervix and transferred to the adjustable clamp; (b) Adjusted: The fixation was performed with one gloved-hand, and after exteriorization, the penis was gripped using the artificial cervix with the other gloved-hand and transferred to the adjustable clamp. The bacterial load (p = .0045) and the occurrence of ejaculates >231 CFU/ml (p = .0101) were reduced in the Adjusted compared to the Traditional method. Bacterial load was reduced when using the Adjusted method in stud B (p = .0011), which showed a greater occurrence of critical factors for bacterial contamination (p ≤ .0034). The Adjusted method reduced the occurrence of ejaculates >231 CFU/ml when the preputial ostium was dirty (p = .016) and the duration of semen collection was >7 min (p = .022) compared to the Traditional method. In conclusion, the Adjusted penis fixation was efficient in reducing bacterial load of ejaculates, mainly in boar stud B, which had high contamination challenges.  相似文献   

A 3-year long study of Staphylococcus aureus isolates from subclinical mastitis in three Azawak zebu herds at the Sahelian experimental farm of Toukounous,Niger     

Abdoulkarim Ibrahim Issa  Jean-Noël Duprez  Rianatou Bada-Alambedji  Mamane Djika  Jacques Georges Mainil  Marjorie Bardiau 《Tropical animal health and production》2016,48(2):321-329

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Preliminary evaluation of a gel tube agglutination major cross‐match method in dogs          下载免费PDF全文

Dania Villarnovo  Shelley A. Burton  Barbara S. Horney  Allan L. MacKenzie  Raphaël Vanderstichel 《Veterinary clinical pathology / American Society for Veterinary Clinical Pathology》2016,45(3):411-416

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