Mycoplasma mycoides subsp. mycoides SC (MmmSC) is the etiological agent of contagious bovine pleuropneumonia (CBPP). Although eradicated in most developed countries, the disease reappeared in Europe in the 1990s. This reappearance may have been caused either by importation from sub-Saharan Africa, where CBPP is still endemic, or by the reemergence of virulent strains in Europe, as suggested by earlier studies. A multilocus sequence analysis scheme has been developed to address this issue and, most importantly, to be able to monitor new epidemics. The alignment of the full genome sequence of the reference strain PG1 and the partial genome sequence of a pathogenic strain allowed the identification of polymorphic sites. Nineteen initial loci were selected within housekeeping genes, genes of unknown function and non coding sequences. The suitability of these loci for genotyping MmmSC strains was first tested on six strains of diverse geographic origin. The analyses showed that the published PG1 sequence contained a number of specific polymorphisms that were therefore of no use for molecular typing. Among the eight informative polymorphic loci finally selected, only one (ftsY) was positioned within a housekeeping gene. Three main groups and 31 different allelic profiles were identified among 51 strains and strain variants examined. Cluster analysis confirmed that European strains from the 1990s did not originate from Africa. It also showed a genetic link between a European strain isolated in 1967 and those found in southern Africa and Australia. This was in agreement with historical data showing that CBPP was introduced in these regions during colonisation in the 19th century. 相似文献
A thorough knowledge of cattle herding systems is very important for planning sustainable genetic improvement and conservation strategies. This paper is initiated to characterize Benin native Borgou cattle farming systems in its department of origin by mean of survey including 180 cattle farmers owning at least one phenotype of that breed. Using multiple correspondence analysis and hierarchical ascending classification, four groups of Borgou cattle farms have been identified. The first group qualified as “semi-intensive purebred Borgou cattle farming” own high numbers (87.2 ± 3.95 heads) purchased and reared with the view to promote its genetic improvement, its production, and its conservation as Benin animal genetic resource. The second group (sedentary purebred Borgou cattle farming) is represented by Bariba ethnic group with small numbers (22.18 ± 0.71 heads) of purebred Borgou cattle used mainly for draught. Cattle farmers of the third group are “large transhumant of Zebu and Borgou crossbred cattle farmers” represented by Fulani and Gando ethnic groups whose herds are generally composed of high numbers (75.20 ± 3.43 heads) of cattle acquired by purchasing, inheriting, and fostering. The last one is the “small transhumant of Zebu and Borgou crossbred cattle farming” with an average herd size of 31.98 ± 0.72 heads. Cattle farming is their main activity and animals are used for the production of milk and cheese. These distinctions between Borgou cattle farmers can be an anchorage point for designing sustainable community-based in situ conservation strategies for safeguarding this local breed in its original cradle.
