Lactobacillus rhamnosus GG SpaC pilin subunit binds to the carbohydrate moieties of intestinal glycoconjugates          下载免费PDF全文

Keita Nishiyama  Shintaro Ueno  Makoto Sugiyama  Yuji Yamamoto  Takao Mukai 《Animal Science Journal》2016,87(6):809-815

Lactobacillus rhamnosus GG (LGG) is a well‐established probiotic strain. The beneficial properties of this strain are partially dependent on its prolonged residence in the gastrointestinal tract, and are likely influenced by its adhesion to the intestinal mucosa. The pilin SpaC subunit, located within the Spa pili structure, is the most well studied LGG adhesion factor. However, the binding epitopes of SpaC remain largely unknown. The aim of this study was to evaluate the binding properties of SpaC to the carbohydrate moieties of intestinal glycoconjugates using a recombinant SpaC protein. In a competitive enzyme‐linked immunosorbent assay, SpaC binding was markedly reduced by addition of purified mucin and the mucin oligosaccharide fraction. Histochemical staining revealed that the binding of SpaC was drastically reduced by periodic acid treatment. Moreover, in the surface plasmon resonance‐based Biacore assay, SpaC bound strongly to the carbohydrate moieties containing β‐galactoside at the non‐reducing terminus of glycolipids. We here provide the first demonstration that SpaC binds to the oligosaccharide chains of mucins, and that the carbohydrate moieties containing β‐galactoside at the non‐reducing termini of glycoconjugates play a crucial role in this binding. Our results demonstrate the importance of carbohydrates of SpaC for mucus interactions.  相似文献   

Drip irrigation scheduling for tomatoes in unheated greenhouses   总被引：5，自引：0，他引：5  

Bao-Zhong Yuan  Yaohu Kang  Soichi Nishiyama 《Irrigation Science》2001,20(3):149-154

During the last two decades, energy-saving solar greenhouses without heating systems, about 150-800 m² (width: 5-10 m, length: 30-80 m) in size, have been widely used in the North of China for vegetable production during cold seasons. The greenhouse is also suitable for use in other countries located in the temperate or warm-temperate zones, especially in the developing countries, because it is inexpensive with a simple structure, and does not need any additional energy for heating in winter. Drip irrigation has been recognized as a sensible method of supplying water inside the greenhouses, and a simple method for drip irrigation scheduling at low cost is urgently required. Using the water-balance method, the authors studied the water consumption of tomato (Lycopersicon esculentum Mill.) and the relationship between evapotranspiration and water surface evaporation measured with 20 cm pan. Research results show that there is no significant water flux at 0.75 m depth when soil water potential is kept higher than -20 kPa at 15 cm depth, and around -20 kPa at 60 cm depth. The accumulative value of evapotranspiration is approximately equal to the accumulative value of water surface evaporation measured using 20 cm pan. Further analysis found that 20 cm pan can be used to determine the water requirement of tomato drip irrigation scheduling in this type of greenhouse.  相似文献   

Efficient approach for simultaneous estimation of multiple health-promoting effects of foods     

Nagahama K  Eto N  Yamamori K  Nishiyama K  Sakakibara Y  Iwata T  Uchida A  Yoshihara I  Suiko M 《Journal of agricultural and food chemistry》2011,59(16):8575-8588

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Community structure of bacteria on different types of mineral particles in a sandy soil     

Masaya Nishiyama  Ryohei Sugita  Shigeto Otsuka  Keishi Senoo 《Soil Science and Plant Nutrition》2013,59(5):562-567

Various types of mineral particles in a soil probably provide different microenvironments for microorganisms. The purpose of this study is to investigate whether different types of mineral in a soil harbor different bacterial populations. DNA was extracted from five types (quartz, feldspar, pyroxene, magnetite, iron-coated reddish brown particles) of sand-size mineral particles separated from a sandy soil, and was amplified for partial 16 S rRNA gene by polymerase chain reaction (PCR). Twenty-nine to 69 amplicons per each type of mineral were cloned and sequenced, followed by phylogenetic affiliation of the sequences. As a result, some types of bacteria were detected on all of the types of mineral including the orders Rhizobiales, Bacillales, and Acidobacteriales. In the case of Acidobacteriales, higher percentages were found on magnetite and quartz. Some taxa were restricted to specific types of mineral; the class Actinobacteria was found on pyroxene but not on quartz, and rarely on magnetite and feldspar. Bacterial diversity at the order level estimated by Chao1 value was higher in feldspar and pyroxene than the other three types of mineral. The UniFrac Significance test indicated that the differences in bacterial communitiy structures among the particles were suggestive except that between feldspar and pyroxene. These results support the idea that different communities of bacteria were associated with each of the mineral types.  相似文献   

Influences of indigenous phototrophs on methane emissions from a straw-amended paddy soil     

Naoki Harada  Shigeto Otsuka  Masaya Nishiyama  Satoshi Matsumoto 《Biology and Fertility of Soils》2005,41(1):46-51

A pot experiment was conducted to investigate the influences of indigenous phototrophs on methane (CH₄) emissions from a paddy soil where rice straw was incorporated or was surface-applied. During the cultivation, half of the pots were covered with aluminum foil, except for the minimum space for rice plants, to prevent ambient light reaching the floodwater or the soil surface. Growth of oxygen-producing phototrophs was hardly observed in the unilluminated plots, whereas intensive growth of algae, duckweed and hydrophytes was found in the illuminated ones. Plant growth was not affected by the different treatments. Seasonal changes in CH₄ emission determined by a closed chamber method indicated that illumination had no or only minor effects on CH₄ emissions when rice straw was incorporated or was not applied, but significantly reduced CH₄ emissions when rice straw was surface-applied. Methanogenesis occurring in the soil-floodwater interface was further investigated in two lab-scale model experiments measuring methanogenic activity. As a result, more activated methanogenesis was found in the surface-applied rice straw and the soil around the straw compared with the soil incubated without rice straw. The magnitude of the methanogenic activity in the rice straw incubated under illuminated conditions was significantly lower than that incubated in the dark. Consequently, this study demonstrates that methanogenesis in paddy soil occurs even in the soil-floodwater interface if plant residues like rice straw exist, and such methanogenesis is likely to be suppressed by growth of indigenous phototrophs under illumination.  相似文献   

Drying Enhancement of Rough Rice by an Electric Field   总被引：4，自引：0，他引：4  

W. Cao  Y. Nishiyama  S. Koide  Z. H. Lu 《Biosystems Engineering》2004,87(4):445-451

Corona discharge produced by a multiple point-to-plate high-voltage electric field (HVEF) was used to investigate the enhancement of rough rice drying and its effect on rice fissuring and germination. The HVEF consisted of a 16 needle point cathode with a direct current power supply, and a grounded stainless steel plate anode. The drying rate of the treated rough rice was notably greater than that of the control, and the drying rate was described by an exponential model. There was a good agreement between the predicted and experimental results (coefficient of determination R²=0·98). The electric field treatment significantly enhanced drying but had no effect on rice fissuring at a lower temperature. The average drying rate of the treated rice increased 2·83, 1·59 and 1·63 times at 25, 40 and 50°C, respectively, compared to the corresponding control. The drying rate also increased with increasing electric field strength. The electric field treatment did not have significant effects on the percentage of kernels having heavy fissures or the germination rate of rough rice (probability P>0·05). The total number of fissured kernels in the treated sample was increased compared to the control.  相似文献   

Epithelial-mesenchymal transition and bi- and multi-nucleated trophoblast cell formation in ovine conceptuses during the peri-implantation period     

Ayami YAMADA  Kaito OHTSUKI  Natsumi SHIGA  Jonathan A. GREEN  Yuta MATSUNO  Kazuhiko IMAKAWA 《The Journal of reproduction and development》2022,68(2):110

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First Identification of 12β-Deoxygonyautoxin 5 (12α-Gonyautoxinol 5) in the Cyanobacterium Dolichospermum circinale (TA04) and 12β-Deoxysaxitoxin (12α-Saxitoxinol) in D. circinale (TA04) and the Dinoflagellate Alexandrium pacificum (Group IV) (120518KureAC)     

Michiru Akamatsu  Ryosuke Hirozumi  Yuko Cho  Yuta Kudo  Keiichi Konoki  Yasukatsu Oshima  Mari Yotsu-Yamashita 《Marine drugs》2022,20(3)

Saxitoxin and its analogues, paralytic shellfish toxins (PSTs), are potent and specific voltage-gated sodium channel blockers. These toxins are produced by some species of freshwater cyanobacteria and marine dinoflagellates. We previously identified several biosynthetic intermediates of PSTs, as well as new analogues, from such organisms and proposed the biosynthetic and metabolic pathways of PSTs. In this study, 12β-deoxygonyautoxin 5 (12α-gonyautoxinol 5 = gonyautoxin 5-12(R)-ol) was identified in the freshwater cyanobacterium, Dolichospermum circinale (TA04), and 12β-deoxysaxitoxin (12α-saxitoxinol = saxitoxin-12(R)-ol) was identified in the same cyanobacterium and in the marine dinoflagellate Alexandrium pacificum (Group IV) (120518KureAC) for the first time from natural sources. The authentic standards of these compounds and 12α-deoxygonyautoxin 5 (12β-gonyautoxinol 5 = gonyautoxin 5-12(S)-ol) were prepared by chemical derivatization from the major PSTs, C1/C2, produced in D. circinale (TA04). These standards were used to identify the deoxy analogues by comparing the retention times and MS/MS spectra using high-resolution LC-MS/MS. Biosynthetic or metabolic pathways for these analogues have also been proposed based on their structures. The identification of these compounds supports the α-oriented stereoselective oxidation at C12 in the biosynthetic pathway towards PSTs.  相似文献   

Characterization of an Alginate Lyase,FlAlyA, from Flavobacterium sp. Strain UMI-01 and Its Expression in Escherichia coli     

Akira Inoue  Kohei Takadono  Ryuji Nishiyama  Kenji Tajima  Takanori Kobayashi  Takao Ojima 《Marine drugs》2014,12(8):4693-4712

A major alginate lyase, FlAlyA, was purified from the periplasmic fraction of an alginate-assimilating bacterium, Flavobacterium sp. strain UMI-01. FlAlyA showed a single band of ~30 kDa on SDS-PAGE and exhibited the optimal temperature and pH at 55 °C and pH 7.7, respectively. Analyses for substrate preference and reaction products indicated that FlAlyA was an endolytic poly(mannuronate) lyase (EC 4.2.2.3). A gene fragment encoding the amino-acid sequence of 288 residues for FlAlyA was amplified by inverse PCR. The N-terminal region of 21 residues except for the initiation Met in the deduced sequence was predicted as the signal peptide and the following region of six residues was regarded as propeptide, while the C-terminal region of 260 residues was regarded as the polysaccharide-lyase-family-7-type catalytic domain. The entire coding region for FlAlyA was subjected to the pCold I—Escherichia coli BL21(DE3) expression system and ~eight times higher yield of recombinant FlAlyA (recFlAlyA) than that of native FlAlyA was achieved. The recFlAlyA recovered in the periplasmic fraction of E. coli had lost the signal peptide region along with the N-terminal 3 residues of propeptide region. This suggested that the signal peptide of FlAlyA could function in part in E. coli.  相似文献   

Critical Discussion on Abortive Interspecific Crosses in Brassica   总被引：1，自引：1，他引：1  

I. Nishiyama    M. Sarashima  Y. Matsuzawa 《Plant Breeding》1991,107(4):288-302

In most interspecific hybridization among diploid Brassica species (n = 8, 9, 10), few or no hybrids are obtained, and the three crosses of tetraploid (n = 17, 18, 19) by diploid species are usually only partially successful, especially in one of the reciprocal crosses. Such a cross-incompatibility complex is explained in this paper by a polar-nuclei activation (PNA) hypothesis which proposes two reversible functions, a normal reproduction and a sexual barrier, of double fertilization in higher plants. The first, i.e. the relative activating value (AV) of diploid species, was estimated as 1.0–3.5, whereas that of tetraploid species was 2.7–5.2. In addition, crosses with a polar nuclei activation index (AI) of about 15–87 % were compatible but those beyond the two limits were incompatible, 50 % of those showing normal seed development after self-pollination.  相似文献