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A comparison of gene content and genome architecture of Trypanosoma brucei, Trypanosoma cruzi, and Leishmania major, three related pathogens with different life cycles and disease pathology, revealed a conserved core proteome of about 6200 genes in large syntenic polycistronic gene clusters. Many species-specific genes, especially large surface antigen families, occur at nonsyntenic chromosome-internal and subtelomeric regions. Retroelements, structural RNAs, and gene family expansion are often associated with syntenic discontinuities that-along with gene divergence, acquisition and loss, and rearrangement within the syntenic regions-have shaped the genomes of each parasite. Contrary to recent reports, our analyses reveal no evidence that these species are descended from an ancestor that contained a photosynthetic endosymbiont.  相似文献   
2.
Brachiaria is a tropical, warm-season grass native to Africa. It is an extensively cultivated forage in the tropics with proven benefits on livestock productivity. Brachiaria is well-known for high biomass production, animal nutrition, carbon sequestration, biological nitrification inhibition, soil conservation, and adaptation to drought and low fertility soils. However, the use of Brachiaria grass for fodder production in Africa has been little explored largely due to lack of cultivars suitable to different production environments. The exploration and use of natural diversity is fundamental for an efficient Brachiaria breeding program. We analysed genetic diversity and population structure of 112 Ethiopian Brachiaria brizantha accessions using 23 microsatellite markers. A total of 459 alleles were detected with an average polymorphic information content of 0.75 suggesting high discriminating ability of these markers. The molecular variance analysis showed a high contribution (86%) of within-cluster differences to the total variation. Three allelic pools revealed by STRUCTURE analysis in 112 accessions were in agreement with the clustering patterns seen in neighbor-joining tree and principal coordinates analyses. A core collection of 39 B. brizantha accessions was constituted. This study concludes a high genetic diversity of Ethiopian B. brizantha accessions and their importance in Brachiaria breeding programs.  相似文献   
3.
Damping-off and stem rot disease-causing Sclerotium rolfsii has been reported as a destructive soil-borne pathogen of numerous crops, especially in the tropics and subtropics. Trials were conducted to test the efficacy of biocontrol agents alone or combined with Moringa oleifera leaf extracts for the control of the disease. In the laboratory, PDA was amended with Moringa leaf extract, and mycelial growth of S. rolfsii was measured. In the greenhouse and field, Trichoderma Kd 63, Trichoderma IITA 508 and Bacillus subtilis were evaluated as seed treatments, soil drench or sprinkle, separately or combined with Moringa leaf extracts. Percentage disease incidence, severity and control were recorded. In the laboratory, the higher the extract concentration the less the mycelial growth and no mycelial growth occurred on extract at 15 or 20 g leaves 10 ml−1 water. In the greenhouse, the highest disease control was observed at a Moringa extract concentration of 15 kg leaves 10 l−1 water (w/v). Seed treatments using Trichoderma Kd 63, and soil sprinkle using Trichoderma IITA 508 had a significantly (P = 0.05) higher effect on a disease incidence than Bacillus. Disease severity followed the same pattern. Moringa seed treatment combined with Trichoderma soil sprinkle resulted in significantly more than 94% and 70% disease control in the greenhouse and field, respectively, with significant yield increase in the field. This is the first report of Moringa leaf extract combined with Trichoderma as an integrated control for Sclerotium damping-off and stem rot of cowpea in the field.  相似文献   
4.
An oligonucleotide probe targeting the rRNA of Erwinia herbicola and Erwinia ananas was designed to detect their cells using fluorescence in situ hybridization. The Cy3-labeled probe hybridized strongly with these species but very weakly with nontarget species such as Erwinia mallotivora, Erwinia nigrifluens, Erwinia cypripedii, Erwinia chrysanthemi, Erwinia carotovora subsp. carotovora, E. carotovora subsp. atroseptica, and Escherichia coli. This technique visualized E. herbicola cells after inoculation of kumquat fruits. The probe is promising as a tool for studying population dynamics of E. herbicola and E. ananas.  相似文献   
5.
The role of phenolics in plant tolerance to pathogen infection is well documented. The objective of the present preliminary investigation was to study phenolic metabolites involved in the tolerance or susceptibility of cowpea (Vigna unguiculata Walp.) cultivars to Sclerotium rolfsii Sacc. and to use their presence as a possible screening tool. Total, free acid, ester-bound and cell wall-bound phenolics of 10 cowpea cultivars were quantified. In healthy seedlings, the tolerant cultivars displayed the higher phenol content than the susceptible cultivars. In S. rolfsii infected seedlings, the highest increase was found from 48 h after inoculation. The net effect of inoculation was a 630% increase in total phenolics (soluble and insoluble) in the stem of tolerant cultivars while the total phenolic content increased only by 212% in the stems of susceptible cultivars. Although, no significant difference (P = 0.05) was detected among cultivars, in terms of free acid phenolics, the amount of ester-bound and cell wall-bound phenolics significantly increased, therefore demonstrating a similar trend to the one observed for the total phenolic content. These preliminary results showed that the presence of phenolics before and after S. rolfsii infection may be used as a rapid screening method for detection of tolerance to S. rolfsii damping-off and stem rot of cowpea.  相似文献   
6.
African trypanosomes cause human sleeping sickness and livestock trypanosomiasis in sub-Saharan Africa. We present the sequence and analysis of the 11 megabase-sized chromosomes of Trypanosoma brucei. The 26-megabase genome contains 9068 predicted genes, including approximately 900 pseudogenes and approximately 1700 T. brucei-specific genes. Large subtelomeric arrays contain an archive of 806 variant surface glycoprotein (VSG) genes used by the parasite to evade the mammalian immune system. Most VSG genes are pseudogenes, which may be used to generate expressed mosaic genes by ectopic recombination. Comparisons of the cytoskeleton and endocytic trafficking systems with those of humans and other eukaryotic organisms reveal major differences. A comparison of metabolic pathways encoded by the genomes of T. brucei, T. cruzi, and Leishmania major reveals the least overall metabolic capability in T. brucei and the greatest in L. major. Horizontal transfer of genes of bacterial origin has contributed to some of the metabolic differences in these parasites, and a number of novel potential drug targets have been identified.  相似文献   
7.
A total of seventeen caprine microsatellite markers were used on 169 goats to investigate genetic diversity of eight Cameroon native goat populations and to assess genetic differentiation with the East African small goat. All microsatellites showed a high polymorphic content （PIC） of more than 0.5 in almost all ecotypes. These microsatellite markers were useful for native goat ecotypes variability assessment. Expected heterozygosity of all ecotypes was above 0.5, varying from 0.2 to 0.7. Only goats from Eastern rainforest ecotype deviated from Hardy-Weinberg equilibrium test （P 〉 0.001）. Although geographic distribution was a good indication of differentiation, there appeared a tendency of genetic exchange between various ecotypes in Cameroon native goats.  相似文献   
8.
Stem straightness, axis persistence, presence/absence of protuberant buds and epicormics, diameter and height have profound influence on timber quality and volume of teak (Tectona grandis). Provenance trials of teak were established in the 1970s in Ghana, as part of the Food and Agriculture Organization (FAO) International Series of Provenance Trials, with the view of selecting teak germplasm for sites with specific environmental conditions. Two field trials were located in dry semi-deciduous (dry) and moist semi-deciduous (moist) ecological zones of Ghana. They consisted of 13 provenances, including four landraces each from Ghana and Indonesia, and two and three provenances from India and Laos, respectively. Trees were assessed at 9, 17 and 28 years to (1) quantify the potential variation in quality and timber volume production, (2) examine possibilities for determining early selection of parameters of superior provenances and (3) select provenances for sites with particular environmental conditions. Production traits were higher on the moist site than the dry site. Mean height was 23.2 and 20.2 m tree?1, stem cross-sectional area at breast height was 0.0896 and 0.0474 m2 tree?1, and stem volume was 0.75 and 0.34 m3 tree?1 for the moist and dry sites, respectively. Nilambur provenance from moist India had the highest mean stem straightness score of 19% above average, whereas Savannakhet from Laos had the best protuberant bud score with 18% of the trees above average. Indonesian landraces performed better in the dry zone, whereas provenances from India and Laos performed better in the moist zone. Phenotypic correlations between age 9 and 28 years were moderate (r 0.54–0.90) to high (r > 0.90) for production and qualitative characteristics, indicating feasibility of early assessment for identification of superior provenances. Nilambur and Savannakhet II provenances proved to be favourable choices for the moist zone, whereas the Temandsang provenance from Indonesia was found to be the best choice for the dry site.  相似文献   
9.
Damping-off and stem rot are two types of diseases affecting cowpea (Vigna unguiculata (L.) Walp.) in the Quémé Valley, Benin. Of the fungal species isolated from diseased plants in the field during a 2-year experiment (2001 and 2002),Sclerotium rolfsii Sacc. was found to be solely responsible for these diseases. The disease incidence decreased with increasing distance of the field from the river. Measurement ofS. rolfsii initial inoculum, soil moisture and disease incidence in cowpea field plots revealed a positive correlation among these parameters. The multiple regression analysis showed that the disease incidence increase was 0.4% for one unit increase in soil moisture percent, whereas the disease incidence increase was 19.8% for one unit increase of the density of initial inoculum of the pathogen. This is the first comprehensive study of the effects of environmental factors on the incidence of cowpea damping-off and stem rot caused byS. rolfsii in Benin, and shows that the density of the initial inoculum is the main contributing factor of the disease in the field in the Quémé Valley. http://www.phytoparasitica.org posting Dec. 19, 2004.  相似文献   
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