The extent of genetic diversity among Vanilla species: Comparative results for RAPD and ISSR     

Praveen C. Verma  Debasis Chakrabarty  Satya Narayan Jena  Devesh K. Mishra  Pradhyumna K. Singh  Samir V. Sawant  Rakesh Tuli 《Industrial Crops and Products》2009,29(2-3):581-589

Vanilla is a large genus of about 110 species in the orchid family (Orchidaceae), including the species Vanilla planifolia from which commercial vanilla flavoring is derived. Since most species of vanilla are considered rare and endangered there is an urgent need to conserve them through genetic analysis and propagation/conservation studies on this crop.The present study investigated the genetic diversity among nine leafy- and leaf-less Vanilla species employing 30 decamer RAPD primers and 10 ISSR primers. The species under study were diverse and displayed a range of variability (0–66% and 0–81% for RAPD and ISSR, respectively). A total of 154 RAPD polymorphic markers (83.24%, h = 0.378) and 93 ISSR polymorphic markers (86.11%, h = 0.363) were used to generate a genetic similarity matrix followed by the cluster analysis. Specific groupings were revealed by each cluster analysis with slight variation between two different markers. Among the nine species studied, V. planifolia, Vanilla aphylla and Vanilla tahitensis revealed very low level of variation within their collections, thus indicating a narrow genetic base. The large genetic distance of Vanilla andamanica from other species suggests its different origin. A close genetic affinity was observed between the pairs V. planifolia, V. tahitensis and Vanilla albida, V. aphylla. These are the first comparative results for RAPD and ISSR reporting inter-relationship among nine cultivated, wild and hybrid Vanilla species.  相似文献   

Environmental exposure to residues after aerial spraying of endosulfan: residues in cow milk,fish, water,soil and cashew leaf in Kasargode,Kerala, India   总被引：3，自引：0，他引：3  

Ramesh A  Vijayalakshmi A 《Pest management science》2002,58(10):1048-1054

A detailed study has been conducted to evaluate the residues of endosulfan and its principal metabolite (alpha-endosulfan, beta-endosulfan and endosulfan sulfate) which may have accumulated in environmental samples due to regular aerial spray application of endosulfan on cashew leaf plantation for a period of 20 years. Three months after the last spray of endosulfan 350 g litre-1 EC at 300 ml acre-1 (equivalent to 105 g AI acre-1 = 42.5 g ha-1), a total of 93 samples of cow milk, fish, water, soil and dried cashew leaf were collected from a village in Kasargode District, Kerala, India, where endosulfan contamination was likely to have occurred. All the samples were analyzed for total residues of endosulfan (comprising alpha- and beta-endosulfan), endosulfan sulfate and also the potential hydrolysis product endosulfan diol, using gas chromatography with electron capture detection. The minimum detection limits of total endosulfan was 0.001 microgram g-1. Analysis of soil samples showed the deposition of total endosulfan residues in the range < 0.001-0.010 microgram g-1, and dried leaf samples showed residues of endosulfan in the range < 0.001-3.43 micrograms g-1 dry weight. In cow milk, fish and water, endosulfan residues could not be detected above the minimum detection limit. Endosulfan diol was not observed in any sample. The data obtained was confirmed by GC-MS-EI using selective ion monitoring (SIM) mode.  相似文献   

Development and evaluation of an indirect enzyme-linked immunosorbent assay for detection of foot-and-mouth disease virus nonstructural protein antibody using a chemically synthesized 2B peptide as antigen.     

Toru Inoue  Satya Parida  David J Paton  Wilai Linchongsubongkoch  David Mackay  Yooni Oh  Dilok Aunpomma  Simon Gubbins  Takakiyo Saeki 《Journal of veterinary diagnostic investigation》2006,18(6):545-552

Forty peptides were synthesized corresponding to hydrophilic clusters of amino acids within the sequences of foot-and-mouth disease virus (FMDV) nonstructural proteins (NSP). Six peptides were studied in more detail and the most promising, a 2B peptide, was evaluated in enzyme-linked immunosorbent assay (ELISA) using sera from naive, vaccinated, and vaccinated-and-challenged cattle as well as bovine sera from field outbreaks. The performance of the new NSP peptide ELISA was compared to that of 4 commercial NSP ELISA kits. Antibody to 2B was detectable from the end of the first week to the second week after infection in most of the nonvaccinated animals and by the second to third week in vaccinated-and-challenged animals. The sensitivity of the 2B peptide ELISA was comparable to the 3ABC Ceditest (Ceditest FMDV-NS, Cedi Diagnostics B.V.; Chung et al., 2002). With some modification and further validation, this 2B test could be useful as a screening or conformational NSP test in postvaccination surveillance for FMD.  相似文献   

Fruit infestation of Acacia tortilis (Forsk) hyne by Bruchidius andrewesi Pic. (Coleoptera: Bruchidae) in the Thar desert     

Satya Vir  S.K. Jindal 《Forest Ecology and Management》1994,70(1-3):349-352

Bruchidius andrewesi Pic. has been recorded as a serious pest of pods and seeds of Acacia tortilis in the Thar desert of India. Pest infestation on developing pods and its relationship with morphological traits is reported. Pod infestation varied from 5 to 19% with 5–29% infestation of seeds. Infestation of pods is directly related to infestation of seed (r = 0.72^**), and both pod and seed infestation are also directly correlated with loss in seed biomass (r = 0.79^** and R = 0.88^**). The infestation of pods starts in November and increases steady until harvest. Seeds kept in the laboratory for further studies were found to be 100% infested with B. andrewesi, as the insect multiplied faster under these conditions. The heavy infestation is damaging not only to A. tortilis but also to other leguminous trees of the desert. Bruchidius andrewesi has also been found on pods and seeds of Prosopis cineraria, an important indigenous tree of the region.  相似文献   

Identification of RAPD markers linked to the rust (<Emphasis Type="Italic">Uromyces fabae</Emphasis>) resistance gene in pea (<Emphasis Type="Italic">Pisum sativum</Emphasis>)     

S.?Vijayalakshmi  Kusum?Yadav  Chanda?Kushwaha  S.?B.?Sarode  C.?P.?Srivastava  Ramesh?Chand  B.?D.?SinghEmail author 《Euphytica》2005,144(3):265-274

Summary Two RAPD markers linked to gene for resistance (assayed as pustule number cm⁻² leaf area) to rust [Uromyces fabae (Pers.) de Bary] in pea (Pisum sativum L.) were identified using a mapping population of 31 BC₁F₁ [HUVP 1 (HUVP 1 × FC 1] plants, FC 1 being the resistant parent. The analysis of genetics of rust resistance was based on the parents, F₁, F₂, BC₁F₁ and BC₁F₂ generations. Rust resistance in pea is of non-hypersensitive type; it appeared to be governed by a single partially dominant gene for which symbol Ruf is proposed. Further, this trait seems to be affected by some polygenes in addition to the proposed oligogene Ruf. A total of 614 decamer primers were used to survey the parental polymorphism with regard to DNA amplification by polymerase chain reaction. The primers that amplified polymorphic bands present in the resistant parent (FC 1) were used for bulked segregant analysis. Those markers that amplified consistently and differentially in the resistant and susceptible bulks were separately tested with the 31 BC₁F₁ individuals. Two RAPD makers, viz., SC10-82₃₆₀ (primer, GCCGTGAAGT), and SCRI-71₁₀₀₀ (primer, GTGGCGTAGT), flanking the rust resistance gene (Ruf) with a distance of 10.8 cM (0.097 rF and LOD of 5.05) and 24.5 cM (0.194 rF and a LOD of 2.72), respectively, were identified. These RAPD markers were not close enough to Ruf to allow a dependable maker-assisted selection for rust resistance. However, if the two makers flanking Ruf were used together, the effectiveness of MAS would be improved considerably.  相似文献   

Diofenolan: a novel insect growth regulator in common citrus butterfly, <Emphasis Type="Italic">Papilio demoleus</Emphasis>     

Satya Singh  Krishna Kumar 《Phytoparasitica》2011,39(3):205-213

Penultimate and last instar larvae of the common citrus swallowtail butterfly, Papilio demoleus L. (Papilionidae: Lepidoptera), were treated with different doses of a novel juvenoid, diofenolan. Several deformities were observed as a result of topical administration of diofenolan which include delay in larval–larval and larval–pupal ecdysis, ecdysial failure, mortality, severe reduction in pupation, deformed pupae and complete inhibition of adult emergence. The juvenoid diofenolan severely hampers the normal growth, development and metamorphosis of P. demoleus and can be incorporated into integrated pest management programs for successful control of this important pest of citrus all over the world.  相似文献   

An Analysis of Grain Development in Oryza sativa L. Cultivars     

C. Vijayalakshmi    R. Chandra Babu  S. R. Sree Rangaswamy   《Journal of Agronomy and Crop Science》1988,161(3):181-184

A field study was conducted to determine if differences in grain filling rate and duration existed in two early cultivars of rice. There is no cultivar difference in duration of grain filling and grain matured in about 30 days from anthesis in both the cultivars. The effective grain filling period in rice is only 10 days between 3rd and 13th day from anthesis. There is significant difference in grain filling rate and is positively related to grain weight. Grain filling rate is more important than duration of filling for achieving higher grain size and thus yield in rice.  相似文献   

An investigation of the possible causes for the loss of productivity in genetically improved farmed tilapia strain in Fiji: inbreeding versus wild stock introgression     

Elise M McKinna  Satya Nandlal  Peter B Mather  David A Hurwood 《Aquaculture Research》2010,41(11):e730-e742

Four microsatellite markers and a mitochondrial DNA (mtDNA) fragment were used to investigate two possible explanations for a reported decline in productivity of genetically improved farmed tilapia (GIFT) in Fiji: (i) a decline in genetic diversity (GD) and (ii) genetic introgression from feral tilapia populations. Genetic diversity was estimated using θ and allelic richness, while Bayesian clustering was used to assign individuals to genetic groups (K=2 or 3) to test for introgression. Differentiation among groups was estimated using F_ST analysis. Results indicate that genetic diversity had declined compared with a GIFT reference stock from WorldFish Centre, while there was little evidence for introgression from feral tilapia populations. Loss of genetic diversity most probably resulted from practices that have not actively managed genetic resources in the hatchery. While GIFT is considered to be an improved line of Nile tilapia (Oreochromis niloticus), mtDNA analysis here revealed haplotypes assigned previously to three discrete Oreochromis species (O. niloticus, Oreochromis mossambicus and Oreochromis aureus) in both the Fijian strain and the WorldFish Centre strain. Possible sources for the three divergent lineages are discussed. Results have implications for the management and future expansion of the tilapia culture industry in Fiji as well as in other Pacific island nations.  相似文献   

Effects of dietary protein on growth performance,nutrient utilization,digestive enzymes and physiological status of grey mullet,Mugil cephalus L. fingerlings reared in inland saline water     

Avinash Talukdar  Ashutosh Dharmendra Deo  Narrotam Prasad Sahu  Parimal Sardar  Muhammad Aklakur  Satya Prakash  Nazeema Shamna  Sarvendra Kumar 《Aquaculture Nutrition》2020,26(3):921-935

A 60 days feeding trial was conducted to illustrate the effect of graded levels of protein on the growth and metabolic enzymes of grey mullet (Mugil cephalus L.) fingerlings reared in inland saline water (ISW). Six isoenergetic (16 MJ/kg) and isolipidic (60 g/kg) diets containing 240, 260, 280, 300, 320 and 340 g crude protein (CP)/kg diet were formulated and fed to triplicate. Weight gain %, specific growth rate, protein utilizing efficiency, feed efficiency and RNA:DNA ratio were significantly higher (p < .05) in 320 and 300 g CP/kg diets. Fish fed with 240 g CP/kg diet showed significantly higher (p < .05) feed intake, whole‐body lipid content, hepatosomatic index value and liver glycogen content. Transaminase enzymes and malate dehydrogenase activities were elevated in fish fed 340 g CP/kg diet. Protease activity increased with increasing dietary CP level, but amylase activities showed an inverse relationship. No significant (p > .05) variations were observed for lactate dehydrogenase, oxidative stress enzymes, blood parameters and serum osmolality among all the treatment groups, but red blood cell count increases with increasing dietary CP levels. Based on the results, feeding dietary protein level of 300 g CP/kg is economically viable for rearing of grey mullet in ISW.  相似文献   

OsSCE1 Encoding SUMO E2-Conjugating Enzyme Involves in Drought Stress Response of Oryza sativa     

Dini Nurdiani  Dwi Widyajayantie  Satya Nugroho 《水稻科学》2018,25(2):73-81

Small ubiquitin-like modifier (SUMO)-conjugating enzymes are involved in post-translational regulatory processes in eukaryotes, including the conjugation of SUMO peptides to protein substrate (SUMOylation). SUMOylation plays an important role in improving plant tolerance to abiotic stress such as salt, drought, heat and cold. Herein, we reported the isolation of OsSCE1 (LOC_Os10g39120) gene encoding a SUMO-conjugating enzyme from rice (Oryza sativa cv. Nipponbare) and its functional validation in response to drought stress. The E2 enzyme, OsSCE1, is one of three key enzymes involved in the conjugation of SUMO to its target proteins. Activated SUMO is transferred to the cysteine of an E2 enzyme and then to the target lysine residue of the substrate, with or without the help of an E3 SUMO ligase. Expression of OsSCE1 was strongly induced by polyethylene glycol 6000 (PEG6000) treatment, which suggested OsSCE1 may be involved in the drought stress response. Overexpression of OsSCE1 (OsSCE1-OX) in Nipponbare reduced the tolerance to drought stress. Conversely, the drought tolerance was slightly improved by the knockdown of OsSCE1 (OsSCE1-KD). These results were further supported by measurement of proline content in OsSCE1-OX and OsSCE1-KD transgenic lines under induced drought stress, which showed OsSCE1-KD transgenic lines accumulated higher proline content than the wild type, whereas OsSCE1-OX line had lower proline content than the wild type. These findings suggested OsSCE1 may play a role as a negative regulator in response to drought stress in rice.  相似文献