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1.

Background

Salinity is one of the most severe and widespread abiotic stresses that affect rice production. The identification of major-effect quantitative trait loci (QTLs) for traits related to salinity tolerance and understanding of QTL × environment interactions (QEIs) can help in more precise and faster development of salinity-tolerant rice varieties through marker-assisted breeding. Recombinant inbred lines (RILs) derived from IR29/Hasawi (a novel source of salinity) were screened for salinity tolerance in the IRRI phytotron in the Philippines (E1) and in two other diverse environments in Senegal (E2) and Tanzania (E3). QTLs were mapped for traits related to salinity tolerance at the seedling stage.

Results

The RILs were genotyped using 194 polymorphic SNPs (single nucleotide polymorphisms). After removing segregation distortion markers (SDM), a total of 145 and 135 SNPs were used to construct a genetic linkage map with a length of 1655 and 1662 cM, with an average marker density of 11.4 cM in E1 and 12.3 cM in E2 and E3, respectively. A total of 34 QTLs were identified on 10 chromosomes for five traits using ICIM-ADD and segregation distortion locus (SDL) mapping (IM-ADD) under salinity stress across environments. Eight major genomic regions on chromosome 1 between 170 and 175 cM (qSES1.3, qSES1.4, qSL1.2, qSL1.3, qRL1.1, qRL1.2, qFWsht1.2, qDWsht1.2), chromosome 4 at 32 cM (qSES4.1, qFWsht4.2, qDWsht4.2), chromosome 6 at 115 cM (qFWsht6.1, qDWsht6.1), chromosome 8 at 105 cM (qFWsht8.1, qDWsht8.1), and chromosome 12 at 78 cM (qFWsht12.1, qDWsht12.1) have co-localized QTLs for the multiple traits that might be governing seedling stage salinity tolerance through multiple traits in different phenotyping environments, thus suggesting these as hot spots for tolerance of salinity. Forty-nine and 30 significant pair-wise epistatic interactions were detected between QTL-linked and QTL-unlinked regions using single-environment and multi-environment analyses.

Conclusions

The identification of genomic regions for salinity tolerance in the RILs showed that Hasawi possesses alleles that are novel for salinity tolerance. The common regions for the multiple QTLs across environments as co-localized regions on chromosomes 1, 4, 6, 8, and 12 could be due to linkage or pleiotropic effect, which might be helpful for multiple QTL introgression for marker-assisted breeding programs to improve the salinity tolerance of adaptive and popular but otherwise salinity-sensitive rice varieties.
  相似文献   
2.
An experiment was carried out to evaluate the response obtained in a three‐way cross of rabbits when the lines involved had undergone within‐line selection for litter size or postweaning daily gain. The interaction between the level of nutrition and genetic level of the crossbreds was also studied. Using frozen embryos, old (H1) and current (H2) crossbred does and young were compared contemporarily. Does were fed a standard diet or a diet having high digestible energy and protein. The difference in the number of generations between lines used to produce both crosses were: 13 or 0 for the maternal lines, and 12 for the paternal line. The traits studied in the crossbred does were: daily feed intake during gestation, during the first 3 weeks of lactation and during the last week before weaning; doe weight at mating and at kindling; litter weight at birth and at weaning; total litter size, number born alive and litter size at weaning. The recorded traits for the young were: individual weight at weaning and at 63 days; individual daily gain after weaning; daily feed intake and feed conversion index. The last two traits were recorded as averages per cage. A total of 1161 litters from 190 does were involved. Significant differences in litter‐size traits, between H1 and H2 does, were observed and were higher than the expected from the within‐line response. The doe effect was not significant for other doe traits, adjusted to a constant litter size. The estimated difference in postweaning daily gain between H1 and H2 young was significant and in favour of H2, but the value was considerably lower than expected. The effect of type of feed and the interaction with the type of doe was not significant for any doe trait. The type of feed consumed by the doe was significant for postweaning daily gain, and the interaction with the type of crossbreds was significant for this trait and for individual weight at 63 days.  相似文献   
3.
4.
The biological activity of a series of N-(pyrid-3-yl)thioureas and -carbodiimides, analogues of the insecticide/acaricide diafenthiuron, towards the carmine spider mite (Tetranychus cinnabarinus Boisd.) and the two-spotted spider mite (T. urticae Koch) was analysed using QSAR methodology. A canonical correlation analysis allowed for the establishment of a prediction model and the identification of outliers within that model. The chemodynamic behaviour of certain compounds in the two series, including these outliers, determined by using photochemical experiments in the laboratory as well as in the glasshouse, was shown to be responsible for anomalous results obtained in the biological tests. It was found from the above study that the biological activity towards both spider mite species is extremely sensitive to the kinetics of formation of the carbodiimides from the corresponding thioureas and to the photostability of the former. The results obtained with a thiourea which underwent no appreciable photochemical transformation into the corresponding carbodiimide supported the hypothesis that the thioureas are also in-vivo propesticides of the acaricidal carbodiimides.  相似文献   
5.
Primary porcine endothelial cells have a limited life span in culture. After four to five passages, they tend to de-differentiate and eventually reach senescence. The aim of this work was to establish immortalized porcine aortic endothelial cell lines (AOCs) to facilitate in vitro studies of different pathological process involving the endothelium. Primary porcine aortic endothelial cells (PAECs) were transfected with a plasmid containing the SV40 genome and selected on the basis of morphological and phenotypical features. Flow cytometry analysis demonstrated uptake of acetylated low density lipoproteins (Ac-LDL) and constitutive expression of SLA class I, CD29, CD31, CD41/61, CD80/86, CD46, SWC3, and LAMP-1 antigens by all analyzed lines and showed little differences to primary cells. The functional similarity between primary and immortalized endothelial cells was demonstrated in a cytotoxicity assay using a human natural killer cell line (NKL) as effector. The AOCs cell lines should be valuable tools for in vitro study of the human immune response against pig endothelial cells. In addition, they would be very useful to gain insight in the pathogenesis of some viral haemorrhagic diseases of pig such as African swine fever (ASF) or classical swine fever (CSF).  相似文献   
6.
Milkfish (Chanos chanos) fry with an average weight of 40 mg per fish were stocked in 60-l wooden-glass aquaria filled with 30 l of filtered sea water with a salinity of 32–34 p.p.t. and a temperature of 25–28°C. They were fed diets containing 20, 30, 40, 50 and 60% protein and 2740 kcal of digestible energy per kg at a daily rate of 10% of the biomass for a period of 30 days. Fish which were fed the diet containing 40% protein had the highest weight gain which was significantly higher (P < 0.05) than those of fish receiving the lower dietary levels of protein. Slightly lower weight gains were obtained when fish were fed diets containing 50 and 60% protein. Although feed conversion values were not statistically different (P < 0.05) among all treatments, the value for the 40% protein diet (1.96) was the best. The mean survival rates were low for all treatments but was highest for the 40% protein diet. No significant difference (P < 0.05) was found in the survival rates of fish receiving different treatments. Results show that a dietary level of 40% protein was required by milkfish fry for maximum growth, efficient feed conversion and high survival rate.  相似文献   
7.
The presence of the non-indigenous species, the black-pygmy mussel Xenostrobus securis, is reported here for the first time in an intense shellfish farming area off Galicia (NW Spain). Very high concentrations of this mytilid bivalve have colonized estuarine waters located at the inner part of the Ria de Vigo. The invasive role of X. securis is discussed in the context of the wide ecological tolerance of the species and the recent finding of settlements of this species on numerous colonies of the economically-important blue mussel Mytilus galloprovincialis. The mode of introduction of the black-pygmy mussel is also discussed in relation to human management activities.  相似文献   
8.
Microbound feeds have been well accepted by shrimps and farmers in many penaeid shrimp hatcheries. The present study focused on an adequate level of replacement of Artemia nauplii and microalgae by a microbound diet for rearing Litopenaeus setiferus (Burkenroad) larvae. A microbound diet (MBD) consisting of fishmeal, squid meal, shrimp meal, yeast meal and soybean meal was used. The first experiment was designed to obtain the optimum level of MBD to complete the live feeding schedule, from Protozoea (PZIII) to Mysis (MIII). The experimental levels of the microbound diet tested were 2, 4, 6 and 8 mg MBD L?1 day?1. The next step was to determine the Artemia nauplii replacement level from PZI to MIII by MBD. These experiments were carried out either in the presence (Experiment 2) or in the absence of algae (Experiment 3). Four replacement levels were tested: 0% (4 mg MBD L?1 day?1: 1 Artemia nauplii mL?1), 40% (5.5 mg MBD L?1 day?1: 0.6 Artemia nauplii), 60% (6.5 mg MBD L?1 day?1: 0.4 Artemia nauplii) and 100% (8 mg MBD L?1 day?1: 0 Artemia nauplii). In all experiments growth, survival, development, quality index (QI) and performance index (PI), were used to determine the optimum concentration of microbound diet. Results showed that 6 mg MBD L?1 day?1 can be recommended as a complement to live food for L. setiferus larvae from PZIII to MIII. In the presence of algae, maximum growth and survival may be obtained in 40–60% (5.5–6.5 mg MBD L?1 day?1) of Artemia nauplii replacement levels. In the absence of algae, the Artemia nauplii replacement resulted in slower development, less salinity resistance, lower growth and lower survival than was obtained in larvae fed with algae.  相似文献   
9.
Blood metabolites in wild and seventh-generation cultivated shrimp were measured to determine how size-based selection could alter the nutritional and immunological conditions of Litopenaeus vannamei. Wild L. vannamei juveniles and a sample of seventh-generation cultured shrimp were acclimated under identical conditions. During 55 days, shrimp were fed a high (HCHO: 44%) or a low (LCHO: 3%) carbohydrate diet for 55 days. Wild shrimp showed a direct relation between dietary CHO and lactate, protein and hemocyte levels indicating that dietary CHO was used for protein synthesis via transamination pathways. In seventh-generation cultured shrimp these parameters were inversely proportional to dietary CHO level, indicating the capacity to synthesize protein from dietary CHO was repressed in cultured shrimp. Farmed shrimp showed a limited capacity to respond to LCHO diets demonstrating high protein dependence in their metabolism and immune response. These results demonstrate that during size-based breeding programs other metabolic process than CHO catabolism can be selected. The incapacity of shrimp to use dietary CHO could limit protein reduction of diets and limit the efforts of the shrimp industry to be ecologically and environmentally profitable.  相似文献   
10.
Laboratory spawned one week old veliger larvaeof the tehuelche scallop, Aequipectentehuelchus (D'Orb., 1846), were reared topedivelger stage under three different dietaryregimes in order to determine the best algalcombination under standard hatchery conditions.Veligers were cultured at mean densities of 2.7larvae/ml. Larval growth and survival wereassessed on larvae fed the following dietarytreatments: (1) Isochrysis galbana(T-Iso)+ Chaetoceros calcitrans, (2)Pavlova lutheri + C calcitrans, and (3)P. lutheri + I. galbana T-Iso +Ch. calcitrans. The highest growth rateswere detected on larvae fed diets includingP. lutheri.  相似文献   
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