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Multi#ex—CAPS技术及其在番茄遗传鉴定中的应用 总被引：6，自引：1，他引：6
：应用Multiplex—PCR和CAPS(Cleaved amplified polymorphic sequence)原理研究建立了Mutiplex—CAPS技术。该技术包括：(1)在PCR扩增反应体系加入2对、3对或多对核苷酸引物，经30～40个扩增循环后得到每对引物的特异扩增片段；(2)应用同一种限制性内切酶消化这些不同引物经扩增后获得的特异片段；(3)琼脂糖凝胶电泳溴化乙锭染色检测酶切片段长度的多态性。利用该技术对番茄(Lycopersicon es—cdentum)TA517及其近等基因系的分析表明，Multiplex—CAPS能同时检测2个、3个或多个CAPS标记的多态性，其效果等同于每个CAPS标记的多态性的叠加，重复性好，分析效率高，降低成本数倍。 相似文献
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大豆胞囊线虫(soybean cyst nematode,SCN)严重危害世界大豆生产,Rhg4(resistance to Heterodera glycines 4)是控制大豆SCN抗性的2个主效位点之一。本研究针对Rhg4(Gm SHMT)上的2个单核苷酸多态性(single nucleotide polymorphisms,SNP)位点开发了快速、经济、简便易行的CAPS(Rhg4-389)和d CAPS标记(Rhg4-1165),并用开发的2个标记鉴定了以大豆胞囊线虫应用核心种质为主的193份代表性抗感种质。结果表明,Rhg4-389和Rhg4-1165位点间存在显著连锁不平衡(P=0.0001,r2=0.87),可形成4种单倍型。Rhg4-389-G/Rhg4-1165-T和Rhg4-389-C/Rhg4-1165-A为优势单倍型,稀有单倍型Rhg4-389-G/Rhg4-1165-A和Rhg4-389-C/Rhg4-1165-T是在中国抗源中新发现的单倍型。结合193份种质对SCN 3号小种抗性鉴定分析发现,Rhg4-389-G和Rhg4-1165-T主要存在于抗病种质,它们形成的单倍型对抗病种质鉴定效率可达94.1%。本研究开发了可用于辅助大豆SCN抗性鉴定且方便育种家利用的CAPS/d CAPS标记,且用其摸清了应用核心种质等重要抗源在Rhg4位点的"本底",为育种家有效利用这些优异抗源提供了重要信息。 相似文献
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利用国外报道的与PVr4基因紧密连锁的CAPS标记,对辣椒抗PVY基因PVr4的转育进行了研究和探讨。采用与报道的相同抗源材料CdM334为回交的供体亲本,与5个自交系77013、75-7-3-1、83077、83078、83-163进行回交,在BC1代进行了分子标记的选择。从5个BC1群体75-7-3-1×(CdM334×75-7-3-1)、77013×(CdM334×77013)、83077×(CdM334×83077)、83078×(CdM334×83078)、83-163×(CdM334×83-163)中,分别检测出含有抗病连锁标记的单株21株、15株、10株、11株、12株。 相似文献
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苹果着色问题是影响我国许多产区苹果质量的重要因素,本研究利用苹果着色相关基因MdMYB1（GenBank登录号：DQ886414）设计引物进行PCR扩增,开发出一个酶切位点为HaeⅢ的CAPS标记Mb2,该标记可用于区分杂交亲本‘富士’和‘嘎拉’苹果及分析其杂交后代植株。进一步利用Mb2标记对该杂交组合的后代植株进行遗传分析,结果表明,可将77个后代植株分为2组,一组42个后代植株含有来自‘嘎拉’亲本的非红色性状等位基因以及来自‘富士’亲本的非红色性状等位基因或者红色性状等位基因,其果实颜色预测为非红色与红色或者非红色与桔红色;另一组35个后代植株含有来自‘嘎拉’亲本的红色性状等位基因以及来自‘富士’亲本的非红色性状等位基因或者红色性状等位基因,其果实颜色预测为桔红色与红色或者只有红色。本研究结果将为选育优质苹果新品种提供依据和方法参考。 相似文献
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Fusarium oxysporum f. sp. lycopersici inhabits most tomato-growing regions worldwide, causing tomato production yield losses. A molecular marker linked to resistance would be useful for tomato improvement programmes. Thus, a cleaved amplified polymorphic sequence (CAPS) marker TAO1902 was developed to identify tomato genotypes possessing the I-2 gene, which confers resistance to F. o. lycopersici race 2. The Rsa I or Fok I restriction fragments corresponded to the presence or absence of the I-2 allele in a segregating 100 F2 progeny, tomato cultivars, 16 resistant and 20 susceptible to Fusarium wilt, respectively, lines and F1 hybrids, representing various tomato gene pools. TAO1902 may be helpful for selection of F. o. lycopersici -resistant tomato germplasm. 相似文献
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Zhiwen Liu Tingdong Fu Ying Wang Jinxing Tu Baoyuan Chen Yongming Zhou Chaozhi Ma Lianmin Shan 《Euphytica》2006,149(3):381-385
Summary We have previously identified 2 RAPD and 8 AFLP markers that were associated with yellow seed coat gene in a stable and pure yellow-seeded DH line No. 2127-17, however, they were not suitable in large-scale MAS. In this paper, it reported our efforts in developing rapid and reliable SCAR and CAPS markers from the RAPD and AFLP markers. Based on the sequence information in the regions of the most closely linked 4 AFLP and 2 RAPD markers, one SCAR (SCS1130) and one CAPS (SCA1) maker were successfully developed. Linkage analysis on a 127 DH lines population derived from the cross Hui5148-2 × No. 2127-17 revealed that they were tightly flanked (3.2 cM, 3.8 cM respectively). The resulting SCS1130 and SCA1 were further evaluated in backcross breeding families and demonstrated more accurate and valuable in MAS breeding. The development of these new markers would facilitate and accelerate the yellow seed coat breeding in Brassica napus. 相似文献
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本研究以自育的26份番茄育种种质和抗南方根结线虫番茄品种‘仙客1号’及感南方根结线虫品种‘阿乃兹’为试验材料,采用病土盘栽自然发病鉴定、苗期二龄幼虫人工接种鉴定和PCR扩增及CAPS检测相结合的方法,研究供试材料对南方根结线虫的抗性水平及基因型。鉴定结果表明,供试的28份番茄材料中,高抗17份、抗病6份(包括抗病对照‘仙客1号’)、感病2份、高感3份(包括感病对照‘阿乃兹’),无免疫材料,且病土盘栽鉴定与苗期接种鉴定的结果一致。PCR扩增结果表明,27份番茄材料均能检测到一条750 bp的特异条带;TaqⅠ酶切结果显示,具有酶切位点的22份试材中有15份含纯合显性Mi-1/Mi-1基因、5份含杂合显性Mi-1/mi-1基因、2份含180 bp+250 bp+300 bp三条特异性片段,并且这22份试材对南方根结线虫表现高抗或抗,而其余5份不含显性Mi-1基因的试材则表现高感或感,证明Mi-1是具有抗南方根结线虫能力的基因,分子检测结果与病土盘栽鉴定和苗期接种鉴定的结果吻合率达92.6%;含有180 bp+250 bp+300 bp三条特异性片段的高抗材料可能含有其它抗根结线虫基因。分子检测与抗性鉴定相结合,能为创制抗南方根结线虫新种质提供一种更加省时、省力且经济有效的科学育种方法,可为番茄抗南方根结线虫育种提供理论依据和实践经验。 相似文献
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A cleaved amplified polymorphic sequence marker was used to detect the alleles Bmy‐Sd2H and Bmy‐Sd3 identifying highly thermostable isoforms of the enzyme b‐amylase, which improves fermentability during brewing. Among the 889 accessions of barley (Hordeum vulgare) investigated, and two accessions of H. spontaneum a total of 166 accessions were identified carrying the superior b‐amylase alleles. These thermostable alleles of b‐amylase were most frequently observed in six‐rowed varieties originating from Asia, especially Japan, with 61.9% of the accessions from Asia carrying the alleles of interest. Additional six‐rowed barleys carrying the relevant alleles were identified among accessions from America, Africa and the Near East. In the European varieties, the percentage of accessions with the alleles of interest was 5.1% with a strong predominance in two‐rowed spring barleys. A pedigree analysis identified the cross ‘Binder’ x ‘Gull’ as the main source of the thermostable b‐amylase alleles in European varieties. The data suggest that an improvement of malting quality in barley could be achieved by introduction of the Bmy1‐Sd2H and Bmy1‐Sd3 alleles into the European breeding programmes. 相似文献