Comparison of Crinipellis perniciosa isolates from Brazil by ERIC repetitive element sequence-based PCR genomic fingerprinting     

M. C. C. de Arruda †  R. N. G. Miller  M. A. S. V. Ferreira  M. S. S. Felipe 《Plant pathology》2003,52(2):236-244

Fifty isolates of Crinipellis perniciosa originating from Theobroma cacao , Heteropterys acutifolia and Solanum lycocarpum , from six states within Brazil, were characterized through ERIC-PCR, representing the first application of this method for molecular characterization within C. perniciosa . Phenetic analysis of banding patterns revealed a separation of isolates on the basis of host of origin, with T. cacao -derived isolates showing only a 0·2 similarity level to a cluster comprising the isolates from H. acutifolia and S. lycocarpum . Considerable intraspecific variability was observed within C. perniciosa isolates from T. cacao , with distinct groups observed correlating with geographical origin. Given that a number of isolates from T. cacao from the Amazon region grouped with isolates from Bahia state, this work discusses the possibility that current C. perniciosa populations pathogenic on T. cacao in Bahia originated from the Amazon region, rather than from alternative host plants.  相似文献   

毕节特产珍稀药材圆珠半夏的HPLC指纹图谱分析     

夏志  张宇  黄荣茂  李黔柱 《贵州农业科学》2015,(4)

为毕节大方圆珠半夏质量标准的建立提供参考,采用HPLC法对10批不同产地及不同采收时间的圆珠半夏进行了指纹图谱研究。结果表明:测定的10批半夏样品有23个共有峰,共有峰面积为91.6%~95.8%,相对峰面积的RSD为0.12%~0.40%;共有峰的相对保留时间从0.182~1.810min,相对保留时间的RSD在0.02%~0.10%。结论,该方法具有良好的稳定性和重复性,可用于圆珠半夏化学成分分析。  相似文献   

Characterization of Nitrate-Reducing and Amino Acid–Using Bacteria Prominent in Nitrotoxin-Enriched Equine Cecal Populations     

《Journal of Equine Veterinary Science》2016

Horses can be at risk for nitropoisoning by consuming plants containing 3-nitro-1-propionic acid or 3-nitro-1-propanol and to a lesser extent by plants containing nitrate. Populations of equine cecal microbes enriched for enhanced rates of 3-nitro-1-propionic acid (NPA) or nitrate metabolism were cultured for NPA- or nitrate-metabolizing bacteria on basal enrichment medium or tryptose soy agar supplemented with either 5-mM NPA or nitrate and under H₂:CO₂ (20:80) as the energy source. After 72 hours, separated colonies picked from plates, or roll tubes were cultured in fresh broth medium for 72 hours and then identified by 16S rRNA gene sequencing. Isolates from the NPA-enriched populations were identified as Streptococcus lutetiensis (five strains), Escherichia coli (two strains), and Sporanaerobacter acetigens (one strain). Strains isolated from nitrate-enriched populations were identified as Escherichia coli (one strain) and Wolinella succinogenes (three strains). None of these strains degraded NPA. Enriched populations of equine cecal microbes, the isolated pure strains and the type strain of Denitrobacterium detoxificans, a competent NPA-metabolizing microbe, were examined using denaturing gradient gel electrophoresis (DGGE). The DGGE analysis indicated that none of the strains in the enriched population of equine cecal microbes were similar to D. detoxificans. However, we report for the first time the isolation of the anaerobic amino acid–using Sporanaerobacter acetigenes from the equine cecum.  相似文献   

利用SCoT对甜菜种质资源的鉴定及遗传多样性分析     

朱尚明  吴则东  兴旺  邳植 《中国农学通报》2020,36(18):119-123

为了研究SCoT分子标记技术对甜菜种质资源鉴定的可行性。利用80条SCoT引物对48份甜菜种质资源进行鉴别,同时对种质资源进行了遗传多样性分析和亲缘关系的鉴定。结果表明,80条SCoT引物中有6条能够扩增出清晰、且多态性高的条带,分别为SCoT1、SCoT12、SCoT13、SCoT14、SCoT17和SCoT23,其中引物SCoT1、SCoT12、SCoT14和SCoT23单独使用均可鉴别全部的48份种质资源,引物SCoT13和SCoT17共同使用可以鉴别48个种质资源;聚类分析结果表明,在遗传距离0.15处,95.8%的种质资源均聚为一类,从分子角度上表明甜菜种质资源遗传距离较小。本研究为利用SCoT分子标记技术鉴别甜菜种质资源、对种质资源进行亲缘关系鉴定、杂交组合亲本选配以及分子标记辅助育种等提供相关科学依据。  相似文献   

Spectrum-Effect Relationship Between High Performance Liquid Chromatography Fingerprints and Anticoccidial Activities of a Compound Chinese Medicine   总被引：1，自引：0，他引：1  

XIAO Sui FEI Chen-zhong ZHANG Li-fang ZHENG Wen-li ZHANG Ke-yu XUE Fei-qun 《中国农业科学(英文版)》2014,(5):1082-1089

Quality control and screening of active substances in traditional Chinese medicines have been performed using fingerprint analysis. The spectrum-effect relationship between chromatography fingerprints and efficacy of herbal drugs is considered as a potentially useful method for determining active ingredients in complex mixtures. The study was designed to develop a method for determining the bioactive components of a compound Chinese medicine called Tiefeng based on spectrum-effect relationships between high-performance liquid chromatography （HPLC） fingerprints and anticoccidial activities. Four peaks of the established HPLC fingerprint indicate the main bioactive components of this medicine. In addition, pharrnacodynamic atlas was defined and used to assess the anticoccidial activity of Tiefeng from different sources for the first time. We found that the level of anticoccidial activity of Tiefeng was consistent with the degree of similarity between the pharmacodynamic atlas and chromatogram of any sample. Furthermore, effect of this medicine was related with the main active constituents, along with the origin and the harvesting time.  相似文献   

Impact of traditional soil burning (guie) on Planosol properties and land‐use intensification in south‐western Ethiopia          下载免费PDF全文

A. Verdoodt  M. Dumon  J. Deckers  E. Van Ranst 《Soil Use and Management》2015,31(2):330-336

In the Gilgel Gibe catchment in Ethiopia, local farmers intensify land use on Planosols by adjusting a traditional soil burning practice known as guie. The burning practice used to be applied in a cycle of shifting cultivation. However, more recently, farmers burn small plots to make fertile seedbeds for Eucalyptus seedlings in the first year before these trees are transplanted to larger plots. The purpose of this research was to assess the physico‐chemical properties of Planosols that have been subjected to burning over the last 10 yrs and evaluate the contribution of guie to land‐use intensification of these soils. Transect studies and interviews of local farmers, followed by chemical, physical and micromorphological analyses of samples from selected plots were used to compare the soil properties of recently (0–2 yrs) and formerly (3–10 yrs) burnt Planosols with those of unburnt Planosols. The analytical results show that the burning practice improved nutrient availability in the first 2 yrs after guie. Increased amounts of exchangeable aluminium (Al) were reported in the long term. Charge fingerprints illustrate that the nutrient‐buffering capacity of the soil was high shortly after the practice but subsequently decreased with time. Given the population pressure on the formerly extensively used Planosols, it is argued that the current application of guie on small, localized plots for raising Eucalyptus seedlings is well adapted to the local socio‐economic context and promotes land‐use intensification on the Planosols. The increased exchangeable Al content of former Eucalyptus seedbeds merits further in‐depth research into the biophysical sustainability of the burning practice.  相似文献   

Establishment of macro-aggregates and organic matter turnover by microbial communities in long-term incubated artificial soils     

《Soil biology & biochemistry》2014

The study of interactions between minerals, organic matter (OM) and microorganisms is essential for the understanding of soil functions such as OM turnover. Here, we present an interdisciplinary approach using artificial soils to study the establishment of the microbial community and the formation of macro-aggregates as a function of the mineral composition by using artificial soils. The defined composition of a model system enables to directly relate the development of microbial communities and soil structure to the presence of specific constituents. Five different artificial soil compositions were produced with two types of clay minerals (illite, montmorillonite), metal oxides (ferrihydrite, boehmite) and charcoal incubated with sterile manure and a microbial community derived from a natural soil. We used the artificial soils to analyse the response of these model soil systems to additional sterile manure supply (after 562 days). The artificial soils were subjected to a prolonged incubation period of more than two years (842 days) in order to take temporally dynamic processes into account. In our model systems with varying mineralogy, we expected a changing microbial community composition and an effect on macro-aggregation after OM addition, as the input of fresh substrate will re-activate the artificial soils. The abundance and structure of 16S rRNA gene and internal transcribed spacer (ITS) fragments amplified from total community DNA were studied by quantitative real-time PCR (qPCR) and denaturing gradient gel electrophoresis (DGGE), respectively. The formation of macro-aggregates (>2 mm), the total organic carbon (OC) and nitrogen (N) contents, the OC and N contents in particle size fractions and the CO₂ respiration were determined. The second manure input resulted in higher CO₂ respiration rates, 16S rRNA gene and ITS copy numbers, indicating a stronger response of the microbial community in the matured soil-like system. The type of clay minerals was identified as the most important factor determining the composition of the bacterial communities established. The additional OM and longer incubation time led to a re-formation of macro-aggregates which was significantly higher when montmorillonite was present. Thus, the type of clay mineral was decisive for both microbial community composition as well as macro-aggregation, whereas the addition of other components had a minor effect. Even though different bacterial communities were established depending on the artificial soil composition, the amount and quality of the OM did not show significant differences supporting the concept of functional redundancy.  相似文献   

The effect of lactic acid bacterial starter culture and chemical additives on wilted rice straw silage          下载免费PDF全文

Yan‐Su Wang  Wei Shi  Lin‐Ting Huang  Cheng‐Long Ding  Chuan‐Chao Dai 《Animal Science Journal》2016,87(4):525-535

Lactic acid bacteria (LAB) are suitable for rice straw silage fermentation, but have been studied rarely, and rice straw as raw material for ensiling is difficult because of its disadvantages, such as low nutrition for microbial activities and low abundances of natural populations of LAB. So we investigated the effect of application of LAB and chemical additives on the fermentation quality and microbial community of wilted rice straw silage. Treatment with chemical additives increased the concentrations of crude protein (CP), water soluble carbohydrate (WSC), acetic acid and lactic acid, reduced the concentrations of acid detergent fiber (ADF) and neutral detergent fiber (NDF), but did not effectively inhibit the growth of spoilage organisms. Inoculation with LABs did not improve the nutritional value of the silage because of poor growth of LABs in wilted rice straw. Inoculation with LAB and addition of chemical materials improved the quality of silage similar to the effects of addition of chemical materials alone. Growth of aerobic and facultatively anaerobic bacteria was inhibited by this mixed treatment and the LAB gradually dominated the microbial community. In summary, the fermentation quality of wilted rice straw silage had improved by addition of LAB and chemical materials.  相似文献   

Fingerprint of GBE by Microemulsion High Performance Thin-layer Chromatography     

LIU De-fang  WANG Bo-chu 《保鲜与加工》2005,(10):115-118

Twelve types of gingko flavonoids were separated with SDS/n -C4 HgOH/n- C7 Hls/H2O microernlusion as developer on polyamide film. The polarity of the microemulsion was regulated through adding or reducing water. Compared with general mobile phase, the sensitivity of detection was improved markedly and the test results were satisfied. By means of HPTLC, fingerprint was argued on gingko flavonoids. It can meet the needs of simple and convenient, reasonable standard quality control methods.  相似文献   

Automatic Fingerprint Classification by GA-Based Neural Network     

HUANG Xi yue  MA Xiao xiao  SHEN Zhi xi  WANG Peng  ZHOU Xin 《保鲜与加工》2001,(1):74-77

Fingerprint classification can provide an important indexing mechanism in a fingerprint database. An accurate and consistent classification can greatly reduce fingerprint matching time for large database. In the paper, by combining genetic algorithm and neural network is presented a fingerprint classification algorithm which is able to achieve an accurate classification. By inputting the global feature represented by directional image to three layer neural network trained by genetic algorithm, the fingerprints were classified into six categories: whorl, right loop, left loop, arch, double loop and undiscerning type successfully.  相似文献