Serologic and molecular survey of horses to Coxiella burnetii in East of Iran a highly endemic area     

《Comparative immunology, microbiology and infectious diseases》2021

There are few reports about Q fever in horse populations worldwide. This study aimed to detect the C. burnetii infection by serologic and molecular confirmation using commercial ELISA kit and real-time PCR in the East of Iran a region highly endemic. A total of 177 blood samples and 115 vaginal swabs were randomly collected from horses in East of Iran. The sera samples were analyzed for anti C.burnetii Ig G antibodies by a commercial ELISA kit and nucleic acid extraxted from vaginal samples were used to determine the C. burnetii DNA by real-time PCR assay. Antibodies were detected in 5.64 % (10/177) of sera samples and C. burnetii DNA was detected in 7.82 % (9/115) of horse vaginal samples. There was no significant difference in seroprevalence in different sex, age and breed groups. Our study showed that horses could be considered as a mild potential reservoir of C. burnetii which may be effective on horse health status. However, additional studies are needed to assess whether the horse could be considered as a relevant transmission risk indicator for Q fever.  相似文献   

Spread of potato virus Y in potato cultivars (Solanum tuberosum L.) with different levels of sensitivity     

Nata&#x;a Mehle  Maja Kova   Nata&#x;a Petrovi   Maru&#x;a Pompe Novak  &#x;pela Baebler  Hana Kre i Stres  Kristina Gruden  Maja Ravnikar 《Physiological and Molecular Plant Pathology》2004,64(6):19

The aim of this work was to correlate the appearance of the symptoms, multiplication and spread of virus after mechanical inoculation of potato (Solanum tuberosum L.) cultivars showing different levels of susceptibility and sensitivity to Potato virus Y^NTN (PVY^NTN). The potato cultivars used were the resistant cultivar Sante and susceptible cultivars Igor, Pentland squire and Désirée. The spread of the virus PVY^NTN in infected plants was monitored using different methods: DAS-ELISA, tissue printing, immuno-serological electron microscopy and real-time PCR. In all three susceptible cultivars, the virus was detected in the inoculated leaves 4–5 days after inoculation. From there virus spread rapidly, first into the stem, then more or less simultaneously to the upper leaves and roots. Real-time PCR was shown to be very sensitive and enabled viral RNA to be detected in non-inoculated leaves of susceptible cultivar Igor earlier than other methods. Therefore, for exact studies of plant–virus interaction, a combination of methods which detect viruses on the basis of their different properties (coat protein, morphology or RNA) should be used to monitor the spread of viruses.  相似文献   

猪SENP1基因克隆、生物信息学分析与表达研究     

戴政列  朱静静  陈振宇  周晓龙  汪涵  李向臣  赵阿勇  杨松柏 《中国畜牧兽医》2021,48(12):4382-4390

试验旨在对猪SUMO特异性蛋白酶1(sentrin-specific protease 1,SENP1)基因CDS区进行克隆和生物信息学分析,并探讨SENP1基因在乙脑病毒(Japanese encephalitis virus,JEV)感染PK15细胞后的表达情况。根据GenBank中公布的猪SENP1基因预测序列(登录号:XM_013997974.2)设计特异性引物,通过RT-PCR和T/A克隆技术对猪SENP1基因CDS区序列进行克隆测序,并进行生物信息学分析,利用实时荧光定量PCR分析猪SENP1基因在JEV感染PK15细胞不同时间点(0、12、24、36、48 h)的表达情况。结果显示,猪SENP1基因CDS序列全长2 034 bp,共编码677个氨基酸。序列比对和系统进化树分析结果表明,猪SENP1蛋白序列和山羊、犬、人、牛的相似性分别为94.8%、94.2%、93.9%和93.8%,说明在这些物种中SENP1的保守性较强;猪与犬的SENP1分子亲缘关系较近。生物信息学分析结果显示,猪SENP1蛋白相对分子质量为76 825.76,等电点为8.53,体外半衰期为30 h,不稳定系数为53.59,总平均亲水指数为－0.622。SENP1蛋白不含信号肽序列,无跨膜结构域。二级结构分析结果显示,SENP1蛋白中α-螺旋、无规则卷曲、延伸链和β-转角分别占31.31%、46.68%、16.25%和5.76%。三级结构分析结果显示,猪SENP1蛋白中存在8个α-螺旋区和7个β-转角区。实时荧光定量PCR结果显示,猪SENP1基因在JEV感染的PK15细胞中呈现上调表达趋势,其中在感染后48 h SENP1基因表达量显著高于对照组(P<0.05)。本试验结果为后续深入研究SENP1基因功能提供了参考。  相似文献   

绵羊FGF10基因克隆、序列分析及其在毛囊发育中的表达分析     

陈磊  袁枫  贺三刚  玛依拉  李文蓉 《中国畜牧兽医》2021,48(2):425-432

本试验旨在获得中国美利奴羊成纤维细胞生长因子10（fibroblast growth factor 10，FGF10）基因的编码区（CDS）全长序列并进行生物信息学分析，随后对FGF10基因在中国美利奴羊毛囊发育过程中的表达特征进行分析，明确其在中国美利奴羊毛囊发育过程中的表达模式，为进一步研究FGF10 mRNA表达水平与中国美利奴羊毛囊生长发育的表达调控机制奠定理论基础。采用PCR扩增获得中国美利奴羊FGF10基因CDS，并克隆到zero PCR@^TM-Blunt进行测序验证；利用实时荧光定量PCR技术检测FGF10在中国美利奴羊毛囊发育过程中的表达差异。结果表明，绵羊FGF10基因CDS长度为696 bp（序列上传GenBank，获得登录号：MT872422），编码231个氨基酸，与牛和山羊的氨基酸序列同源性达100%，存在1个信号肽和1个跨膜结构域，其为分泌通路信号蛋白；实时荧光定量PCR分析表明，FGF10基因在中国美利奴羊毛囊发育过程中均表达，在毛囊发育第85天表达最高，显著高于其他毛囊发育时期（P<0.05）。本研究获得中国美利奴羊FGF10基因完整的编码区序列和毛囊发育过程中的表达特征，生物信息学分析发现，FGF10基因编码区序列具有物种间的保守性，同时FGF10在绵羊毛囊不同发育阶段的皮肤组织中表达，由此表明，FGF10基因可能在绵羊毛囊的生长发育过程中发挥重要的生物学作用。  相似文献   

农产品储运环境实时监测系统设计     

施荣华  李长斌  王国才  郭旭  李尹 《湖南农业大学学报(自然科学版)》2015,(1):48-50

农产品运输车辆和储存仓库的内部温湿度等环境和位置参数是农产品物流调度管理的重要依据，综合使用物联网、无线传感器网络、GPRS无线通信、GSM短信、GPS、GIS等技术与方法，构建一个一体化的农产品储运环境的远程实时监测系统。  相似文献   

基于无线传感网络隧道亮度信号采集系统的研究     

廖江  郑伟  李良荣 《山东饲料》2015,(4)

亮度信号是高速公路隧道节能照明控制系统必须检测的物理量。本文基于zigbee的技术特点，设计了一款基于无线传感网络的隧道亮度信号采集系统。系统的传感器节点负责亮度信号的采集，经CC2530处理发送，通过逐级跳转的方式把数据传输到协调器。协调器通过RS232串口与灯具控制器通信，以此实现对亮度信号的实时采集和可靠性传输。通过实验表明，该系统达到了设计的目的，并适用于高速公路隧道节能照明控制系统。  相似文献   

蛹虫草CmKexin基因克隆和菌丝体中表达检测     

毛玉梅  李琴  付鸣佳  金华燕  沈俊良  钟雪晴 《华北农学报》2016,(4):112-118

为了探讨蛹虫草类枯草杆菌蛋白酶(Subtilisin-like protease)的表达特性,以真菌蛹虫草菌丝体为研究对象,通过RT-PCR获得蛹虫草CmKexin基因的ORF序列,并进行序列分析。应用Northern杂交和Real-time PCR方法,检测蓝光照射后蛹虫草菌丝体中CmKexin基因的转录情况。结果获得蛹虫草CmKexin基因的ORF序列。对翻译蛋白质产物CmKexin进行生物信息学分析,表明该蛋白质含1个属蛋白转化酶的肽酶S8家族功能域(143~429)和1个前体蛋白转化酶P功能域(514~600),符合真菌类枯草杆菌蛋白酶的特征。蛹虫草菌丝体在黑暗预培养4 d后再蓝光照射,Northern Blotting和Real-time PCR检测均可得到相同的结果,即在持续的蓝光照射48~50 h时,出现CmKexin基因的瞬时大量转录。而其他时间内均未检测到该基因的大量转录。试验结果将为蛹虫草类枯草杆菌蛋白酶的利用提供理论依据。  相似文献   

实时荧光定量PCR技术的概述及应用     

梁子英  刘芳 《现代农业科技》2020,(6)

实时荧光定量PCR技术是在传统PCR技术上发展而来的,不仅能判断某一基因的有无,而且还能对其进行定量分析。由于该技术与常规PCR相比,能够进行实时监测、且自动化程度高而被广大研究者青睐。本文对实时荧光定量PCR的原理、数据分析、定量方法、分类以及应用进行了系统而详细地综述。  相似文献   

Rapid screening of genetically modified ingredients in soybean and cotton processing by-product and waste using direct qPCR     

《中国油料作物学报(英文)》2020,5(3):142-148

To develop a simple and fast method for screening genetically modified ingredients from processing by-product and waste, direct quantitative PCR (qPCR) kit-Taqman which omitting multi genomic DNA preparing steps was developed in this study. A total of 18 oil crop processing by-products and wastes including 10 soybean and 8 cotton materials were collected from food processing factories. Compared with 2 commercial direct qPCR kits, conditions of DNA releasing procedure and PCR amplification were optimized. Element screening was performed at the initial step of genetically modified (GM) ingredient testing procedure via direct qPCR. GM event identification was carried out in positive samples by initial screening. Totally 5 screening elements (P–35S, T-NOS, Cp4-epsps, bar and pat) for soybean materials and 6 screening elements (P–35S, T-NOS, NPTII, Cry1Ac, bar and pat) for cotton samples were detected. In GM event identification, MON531 and MON1445 were found in cotton materials. Results were further confirmed by real-time PCR with DNA extraction and purification. The direct qPCR system proposed by this research was convenient for rapid screening and identification of GM ingredients in oil crop primary by-product and waste.  相似文献   

植物病原真菌尖孢镰刀菌检测与定量研究进展   总被引：1，自引：0，他引：1  

董超  方香玲 《草地学报》2021,29(7):1599-1604

尖孢镰刀菌（Fusarium oxysporum）是一种危害严重的土传病原真菌,被列为世界十大植物病原真菌之一。该菌能够侵染棉花（Gossypium hirsutum）、大豆（Glycine max）、西瓜（Citrullus lanatus）、香蕉（Musa nana）、番茄（Lycopersicon esculentum）和苜蓿（Medicago sativa）等100多种具有重要经济价值的作物,引起枯萎病和根腐病等。对土壤和植物根组织中的尖孢镰刀菌进行检测和定量是病害早期诊断和有效防治的基础。本文对国内外关于尖孢镰刀菌检测和定量方法（主要包括培养基菌落平板稀释法、常规PCR和实时荧光定量PCR等）及其应用进行总结,旨在对农牧业生产中尖孢镰刀菌检测和定量提供理论指导。  相似文献