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1.
Theoretical comparisons for quantitativetrait loci (QTL) mapping properties wereconducted among simulated recombinantinbred (RI) populations developed bysingle-hill (SH), complete bulk, and singleseed descent (SSD) procedures by MonteCarlo simulations based on variouspopulation sizes, heritabilities, and QTLeffects. Our simulations includedestimation of QTL effects, QTL positions,and statistical testing power in the RIpopulations by comparing the estimates withpreset values. The simulation resultsshowed that the single hill (SH) bulk andsingle seed descent RI populations weregenerally not significantly different withrespect to quality of estimated QTL effectsand positions. Furthermore, when each RIpopulation had 150 lines, each couldprovide desirable properties for QTLmapping. The results implied that a SH RIpopulation consisting of 75 or moreF2-derived families with two lines perfamily (corresponding population size of150 or above) was appropriate for QTLmapping and was not significantly differentthan a SSD RI population of 150. Thus, theSH method could be used to develop largenumbers of RI lines for achieving betterresults in QTL mapping. Simulations alsoshowed that there was no significantdifference between means using SH methodswith 10 and 100 fruits per family. However, RI populations developed by thecomplete bulk method where F2identities are lost were not suitable forQTL mapping. 相似文献
2.
利用Charleston×东农594构建的F2衍生的149个F2:14～F2:16株系组成的重组自交系群体,采用复合区间作图法(CIM)和多重区间作图法(MIM),连续3 a对一粒荚数、二粒荚数、三粒荚数和四粒荚数共4个荚粒性状进行QTL分析。结果表明:3 a间CIM和MIM分别定位到13个和24个QTL,分布11个连锁群上。采用CIM法,定位到1个控制一粒荚数的QTL在2 a中稳定出现;采用MIM法,定位到1个控制二粒荚数的QTL和1个控制四粒荚数的QTL在2 a中稳定出现,且控制四粒荚数的QTL 2 a的性状贡献率分别为72.5%和37.6%。 相似文献
3.
In an attempt to propagate and conserve the rare, showy bulbous plants of Iris bismarckiana, newly recorded to the flora of Jordan and to contribute to the conservation the wild lris species in Jordan, a simple rapid, time consuming protocol has been developed using plant regeneration via somatic embryogenesis. Somatic embryogenesis was induced in zygotic embryo culture on Murashige and Skoog （MS） medium supplemented with 2,4-dichlorophenoxy acetic acid （8 mg/L） as the sole plant growth regulator, where both embryogenesis calli and somatic embryos were induced. Separation of embryos from embryo clusters was necessary to enhance the frequency of germination. Germination was stimulated by separation of embryos successfully from embryo clusters and transferred onto fresh MS medium. Data obtained were analyzed as a complete random design with three replications. Calli fragments that were transferred to embryogenesis induction medium （EIM） produced white embryo-like globular structures within two weeks. Within three more weeks, clusters of structures at various stages of development could be found on the same callus. The applied technique is rewarding and encouraging for further research on the endangered wild species of Iris in Jordan. 相似文献
4.
QTL analysis for grain weight in common wheat 总被引：6，自引：0，他引：6
Neeraj Kumar Pawan L. Kulwal Anupama Gaur Akhilesh K. Tyagi Jitendra P. Khurana Paramjit Khurana Harindra S. Balyan Pushpendra K. Gupta 《Euphytica》2006,151(2):135-144
Quantitative trait loci (QTL) analysis for grain weight (GW = 1000 grain weight) in common wheat was conducted using a set of 100 recombinant inbred lines (RILs) derived from a cross ‘Rye Selection 111 (high GW) × Chinese Spring (low GW)’. The RILs and their two parental genotypes were evaluated for GW in six different environments (three locations × two years). Genotyping of RILs was carried out using 449 (30 SSRs, 299 AFLP and 120 SAMPL) polymorphic markers. Using the genotyping data of RILs, framework linkage maps were prepared for three chromosomes (1A, 2B, 7A), which were earlier identified by us to carry important/major genes for GW following monosomic analysis. QTL analysis for GW was conducted following genome-wide single marker regression analysis (SMA) and composite interval mapping (CIM) using molecular maps for the three chromosomes. Following SMA, 12 markers showed associations with GW, individual markers explaining 6.57% to 10.76% PV (phenotypic variation) for GW in individual environments. The high grain weight parent, Rye Selection111, which is an agronomically superior genotype, contributed favourable alleles for GW at six of the 12 marker loci identified through SMA. The CIM identified two stable and definitive QTLs, one each on chromosome arms 2BS and 7AS, which were also identified through SMA, and a third suggestive QTL on 1AS. These QTLs explained 9.06% to 19.85% PV for GW in different environments. The QTL for GW on 7AS is co-located with a QTL for heading date suggesting the occurrence of a QTL having a positive pleiotropic effect on the two traits. Some of the markers identified during the present study may prove useful for marker-assisted selection, while breeding for high GW in common wheat. 相似文献
5.
依据IEC61970公共信息模型(CIM)定义的描述所有电力设备的模型和拓扑关系,提出了一种基于CIM模型的变电站一次主接线网络拓扑。通过提取节点-节点关联矩阵,采用简化和加速的关联矩阵改进方法,对电气连通性进行了分析,从而缩短网络拓扑分析时间,减小系统内存开销。实验结果表明,方法有效提高了变电站仿真系统设计的规范性和运行的实时性。 相似文献
6.
绿豆分子遗传图谱构建及若干农艺性状的QTL定位分析 总被引：1，自引：0，他引：1
利用花叶1号×紫茎1号杂交后代衍生的208个F2家系组建群体,构建含有95个SSR标记位点的遗传连锁图谱,该图谱包含11个连锁群,全长1457.47 c M,标记平均间距为15.34 c M。利用复合区间作图法,对株高、幼茎色、主茎色、生长习性、结荚习性、复叶叶形和成熟叶色等农艺性状进行QTL分析,分别检测到与株高、幼茎色、主茎色、复叶叶形有关的QTL各1个,贡献率在8.49%~66.64%之间;与结荚习性有关的QTL3个,贡献率在60.32%~80.36%之间;与成熟叶色有关QTL 4个,贡献率在69.06%~87.35%之间;与生长习性有关的QTL数量最多,共26个,贡献率在58.32%~99.51%之间。上述QTL主要分布在LG1、LG2、LG4、LG8和LG10连锁群,其中LG1最少,仅检测到生长习性的1个QTL,LG4最多,包含了幼茎色、主茎色、结荚习性、生长习性、复叶叶形、成熟期叶色6个农艺性状的15个QTL;这些QTL既可以应用于绿豆育种的分子标记辅助选择,也对深入研究这些性状的遗传奠定了基础。 相似文献
7.
四种不同QTL作图方法的比较研究 总被引：2，自引：0，他引：2
应用区间作图法(IM)、复合区间作图法(CIM)、基于混合线性模型的复合区间作图法(MCIM)和多重区间作图法(MIM)对水稻杂交组合（培矮64S×日本晴）F2群体株高性状进行了QTL作图分析。结果表明，（1）在同一显著水平下(α=0.0023)，4种方法共发现10个QTLs，其中IM法7个，CIM法10个，MCIM法3个，MIM法1个。CIM法的发现能力最强。（2）CIM法发现了IM法发现的全部QTLs，和左端标记的距离也基本一致。（3）4种方法检测到了同一QTL，且共同检测到QTL的贡献率最大。（4）4种方法估计的QTL的平均加性效应ā和显性效应 无显著性差异，同一QTL在显性效应的方向上表现一致。（5）建议使用多种作图方法共同作图，并优先标定共同发现的QTL。 相似文献
8.
基于STEP标准的CIM信息集成方法的研究 总被引：5，自引：0，他引：5
产品数据表达与交换标准STEP为CIM系统的信息集成提供了重要的技术支持。本文着重介绍了STEP标准的体系结构 ,并提出了基于STEP中性文件和基于共享数据库的信息集成方法 相似文献
9.
两种方法定位5个地点大豆蛋白质含量QTL 总被引：4，自引：1，他引：3
利用CIM和MIM法,对大豆Charleston×东农594的154个重组自交系在5个不同地点进行蛋白质含量测定和QTL定位分析。共检测到25个QTL,分别位于A1、B1、C2、D1a、D1b、E、J、L和N连锁群上。用CIM法定位到了20个与蛋白质含量相关的QTL,用MIM法定位到了9个与蛋白质含量相关的QTL。在C2连锁群上多次定位的ProC2-4,标记区间为Sat_092-Satt460,与前人找到的QTL位点一致。 相似文献
10.
Nikhil Y. Patil N. Ace Pugh Robert R. Klein Hector S. Martinez Raul S. Martinez Raul Rodriguez-Herrera 《Journal of Crop Improvement》2019,33(1):1-24
Breeding efforts in cereal crops directed toward developing or improving end-use products of grain require assessment of existing phenotypic variance and an understanding of the genetic control of grain quality traits. To this end, a grain sorghum [Sorghum bicolor (L.) Moench] mapping population consisting of 113 F2:7 recombinant inbred lines (RILs) derived from a cross between Sureño and RTx430 was evaluated in multiple environments for grain composition (fat, fiber, protein, starch) using near-infrared reflectance spectroscopy (NIRS), and size estimates of grain parts (embryo, vitreous endosperm, floury endosperm, kernel area) using an image-based phenotyping software system. Estimates of broad-sense heritability of grain compositional traits ranged from 0.11 to 0.90, whereas those of grain size ranged from 0.16 to 0.72. Composite interval mapping (CIM) was applied to a single nucleotide polymorphism (SNP)-based linkage map to identify marker-trait associations, and through these efforts, a total of 37 quantitative trait loci (QTL) for grain quality were identified across environments. Each QTL explained between 7 and 23% of the phenotypic variation for a given grain trait. Three of the five QTL that colocalized were for traits with significant negative correlation, which included grain protein content that was negatively correlated with grain starch content. In addition, several traits that were positively correlated (e.g. fat and fiber content) also revealed colocalized QTL. Finally, we compared the present study with previous studies identifying grain composition trait loci in an effort to identify genomic regions controlling grain traits across a diversity of environments and sorghum genotypes. 相似文献