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马立克病病毒编码的miR-M4-5p调控宿主靶基因的筛选及鉴定
引用本文:苏芮,滕蔓,李会珍,郑鹿平,刘豪丽,刘金玲,朱志坚,罗俊,张改平.马立克病病毒编码的miR-M4-5p调控宿主靶基因的筛选及鉴定[J].畜牧兽医学报,2020,51(8):1956-1969.
作者姓名:苏芮  滕蔓  李会珍  郑鹿平  刘豪丽  刘金玲  朱志坚  罗俊  张改平
作者单位:1. 河南农业大学牧医工程学院, 郑州 450002;2. 河南省农业科学院动物免疫学重点实验室, 农业部动物免疫学重点实验室, 河南省动物免疫学重点实验室, 郑州 450002;3. 河南省农业科学院, 中英禽病国际研究中心, 郑州 450002;4. 河南科技大学动物科技学院, 动物疫病与公共安全重点实验室, 洛阳 471003;5. 扬州大学江苏高校动物重要疫病与人兽共患病防控协同创新中心, 扬州 225009
基金项目:国家自然科学基金(U1604232;31602050);中原千人计划-中原基础研究领军人才;河南省重点研发与推广专项(192102110072);河南省农业科学院杰出青年科技基金(2019JQ01)
摘    要:血清1型马立克病病毒(MDV-1)感染引起的鸡马立克病(MD)一直以来被认为是研究病毒诱导肿瘤发生机制的理想模型。此前研究发现,MDV-1编码的miR-M4-5p是宿主癌基因miR-155的病毒同源物,从基因组中敲除miR-M4-5p可显著降低MDV-1的致病性和致瘤性,表明miR-M4-5p可能是MDV-1诱导肿瘤发生的重要调控因子。为进一步揭示miR-M4-5p的调控机制,以CEF细胞总RNA反转录产物cDNA为模板,利用hybrid-PCR技术构建了miR-M4-5p的候选靶基因文库。通过基因克隆、PCR鉴定及序列比对分析,获得128个候选基因序列,有73个基因的3'-UTR存在miR-M4-5p的潜在结合靶点,其中23个3'-UTR结合靶点与miR-M4-5p完全互补配对。通过双荧光素酶报告试验和qRT-PCR分析,对miR-M4-5p与3'-UTR的体内外相互作用以及候选靶基因的表达水平进行分析和验证,最终鉴定DPTTMEM230和DCLK1为miR-M4-5p调控的宿主靶基因。本研究为后续进一步阐明miR-M4-5p在MD肿瘤发生中的调控机制奠定了重要基础。

关 键 词:MDV  miRNA  宿主靶基因  肿瘤发生  hybrid-PCR  
收稿时间:2020-01-17

Screening and Characterization of the Host mRNA Targets for the miR-M4-5p Encoded by Marek's Disease Virus
SU Rui,TENG Man,LI Huizhen,ZHENG Luping,LIU Haoli,LIU Jinling,ZHU Zhijian,LUO Jun,ZHANG Gaiping.Screening and Characterization of the Host mRNA Targets for the miR-M4-5p Encoded by Marek's Disease Virus[J].Acta Veterinaria et Zootechnica Sinica,2020,51(8):1956-1969.
Authors:SU Rui  TENG Man  LI Huizhen  ZHENG Luping  LIU Haoli  LIU Jinling  ZHU Zhijian  LUO Jun  ZHANG Gaiping
Abstract:Marek's disease, a rapid-onset neoplastic disease in poultry caused by the serotype 1 Marek's disease virus (MDV-1), has been historically regarded as an ideal model for the research on virally-induced cancers. Previous studies have demonstrated that the deletion of the miR-M4-5p, a viral analog of cellular oncogene miR-155 encoded by MDV-1, from the viral genome significantly reduces virus pathogenicity and oncogenicity, suggesting an important regulatory role responsible for MD tumorigenesis. To further reveal the regulatory mechanism mediated by miR-M4-5p in MD biology, we used CEF total cellular RNA as the template to produce a cDNA library utilizing the hybrid-PCR, for screening the host mRNA targets for miR-M4-5p. A total of 128 candidate host genes were obtained, of which there are 73 candidate binding sites were located in the 3'-UTRs and 23 of them contain the perfect matches of miRNA:mRNA. Further experiments of the dual luciferase reporter assay (DLRA) and the quantitative real-time PCR (qRT-PCR) analysis characterized three host genes, DPT, TMEM230 and DCLK1, as the in vivo targets for miR-M4-5p. Our work provides an important basis for further elucidating the regulatory mechanism of miR-M4-5p in MD oncogenesis.
Keywords:Marek's disease virus  miRNA  host candidate target gene  oncogenesis  hybrid-PCR  
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