| 结核分枝杆菌RD1区T细胞表位分布情况预测及分析 |
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| 引用本文： | 姚翠梅,孙长江,赵娅娅,刘珊珊,刘宏,韩文瑜.结核分枝杆菌RD1区T细胞表位分布情况预测及分析[J].农业科学与技术,2011(9):1401-1404. |
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| 作者姓名： | 姚翠梅 孙长江 赵娅娅 刘珊珊 刘宏 韩文瑜 |
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| 作者单位： | 吉林大学畜牧兽医学院;吉林大学军需科技学院;辽宁省海城市南台镇南台兽医站 |
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| 基金项目： | Supported by National Science and Technology Major Project(2008ZX10301)~~ |
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| 摘 要： | 目的]对结核分枝杆菌RD1区T细胞表位分布情况进行预测和分析。方法]利用NetMHC server生物信息学软件,以和HLA-Ⅱ和HLA-Ⅰ类分子结合能力为指标,分别对结核分枝杆菌RD1区9个编码蛋白进行T细胞抗原表位预测。结果]通过预测,共获得和HLA-Ⅱ类分子结合的抗原表位1580个和HLA-Ⅰ类分子结合的抗原表位336个。结论]预测获得的T细胞抗原表位将对结核病特异性检测及新的结核疫苗研发起到借鉴作用。
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| 关 键 词： | RD1区 NetMHC server HLA-Ⅰ类分子 HLA-Ⅱ类分子 |
Analysis of Predicted T Cell Epitopes from Proteins Encoded by the Specific RD1 Region of Mycobacterium tuberculosis |
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| YAO Cui-mei,SUN Chang-jiang,ZHAO Ya-ya,LIU Shan-shan,LIU Hong,HAN Wen-yu.Analysis of Predicted T Cell Epitopes from Proteins Encoded by the Specific RD1 Region of Mycobacterium tuberculosis[J].Agricultural Science ＆ Technology,2011(9):1401-1404. |
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| Authors: | YAO Cui-mei SUN Chang-jiang ZHAO Ya-ya LIU Shan-shan LIU Hong HAN Wen-yu |
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| Institution: | 1.College of Animal Science and Veterinary Medicine,Jilin University,Changchun 130062;2.College of Quartermaster Technology,Jilin University,Changchun 130062;3.Nantai Veterinary Station of Liaoning Province,Haicheng 114200 |
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| Abstract: | Objective] The study aimed at predicting the T cell epitopes from proteins encoded by the specific RD1 region of Mycobacterium tuberculosis.Method] By using bioinformatics software NetMHC Server,all possible peptides sequences from RD1 region of M.tuberculosis were analyzed in silico for the ability to bind to 34 alleles of HLA I and 9 alleles of HLA II.Result] 1 580 peptides binding to 9 alleles of HLA II and 336 peptides binding to 34 alleles of HLA I were obtained by predication.Conclusion] Identification of T cell epitopes from the proteins encoded by RD1 region may serve to define candidate antigens with potentials in specific diagnosis and development of new vaccines against TB. |
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| Keywords: | RD1 region NetMHC Server HLA-I HLA-II |
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