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基于16S rRNA和Cyt b基因序列探讨2种梅童鱼的遗传分化
引用本文:马国强,高天翔,孙典荣.基于16S rRNA和Cyt b基因序列探讨2种梅童鱼的遗传分化[J].南方水产,2010,6(2):13-20.
作者姓名:马国强  高天翔  孙典荣
作者单位:1. 中国海洋大学海水养殖教育部重点实验室,山东,青岛,266003
2. 中国水产科学研究院南海水产研究所,广东,广州,510300
基金项目:国家高技术研究发展计划(863计划)项目(2006AA09Z418);;国家自然科学基金项目(30471329)
摘    要:比较分析了棘头梅童鱼(Collichthys lucidus)和黑鳃梅童鱼(C.niveatus)的16SrRNA和Cytb基因片段序列差异及遗传分化程度。在长度为526bp的16SrRNA和379bp的Cytb基因片段的核苷酸序列中,2种间共检测到44处核苷酸替代。分析结果表明,2个基因片段的鸟嘌呤(G)含量较低,在Cytb蛋白质编码基因第三密码子位点上表现尤为明显。基于16SrRNA和Cytb基因片段分析结果显示,2种间平均遗传距离分别为0.012和0.111。构建的系统树显示2种梅童鱼在这2个基因片段上存在显著的遗传分化。根据Cytb基因2%/百万年的进化速率推断,棘头梅童鱼与黑鳃梅童鱼的分化时间约为550万年,发生于上新世(Pliocene)早期。

关 键 词:棘头梅童鱼  黑鳃梅童鱼  16S  rRNA  Cyt  b  遗传分化

Discussion of relationship between Collichthys lucidus and C.niveatus based on 16S rRNA and Cyt b gene sequences
MA Guoqiang,GAO Tianxiang,SUN Dianrong.Discussion of relationship between Collichthys lucidus and C.niveatus based on 16S rRNA and Cyt b gene sequences[J].South China Fisheries Science,2010,6(2):13-20.
Authors:MA Guoqiang  GAO Tianxiang  SUN Dianrong
Institution:1. Key Lab. of Mariculture/a>;Ministry of Education/a>;Ocean University of China/a>;Qingdao 266003/a>;China/a>;2. South China Sea Fisheries Research Institute/a>;Chinese Academy of Fishery Sciences/a>;Guangzhou 510300/a>;China
Abstract:Collichthys lucidus and C.niveatus are commercially important fishery resources in China.Partial nucleotide sequences of mitochondrial DNA 16S rRNA and Cyt b gene fragments were sequenced and analyzed to study the relationship between C.lucidus and C.niveatus.Forty-four nucleotide substitutions were detected among 16S rRNA (526 bp) and Cyt b (379 bp) fragments.Nucleotide composition analysis indicated that the content of guanine (G) was relatively low in the two fragments,especially at the third codon posit...
Keywords:Collichthys lucidu  C  niveatus  16S rRNA  Cyt b  genetic differentiation  
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