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利用SSR荧光标记技术分析烟草种质的遗传多样性
引用本文:何其芳,李荣华,郭培国,宁正祥,邱妙文,赵伟才,夏岩石,白盼.利用SSR荧光标记技术分析烟草种质的遗传多样性[J].中国农学通报,2012,28(10):95-102.
作者姓名:何其芳  李荣华  郭培国  宁正祥  邱妙文  赵伟才  夏岩石  白盼
作者单位:1. 广州大学生命科学学院,广州510006;华南理工大学轻工与食品学院,广州510641
2. 广州大学生命科学学院,广州,510006
3. 华南理工大学轻工与食品学院,广州,510641
4. 广东省烟草公司南雄科学研究所,广东南雄,512400
基金项目:国家自然科学基金“大麦抗旱候选基因的关联分析和功能标记的开发”(30871526); 国家烟草专卖局面上项目“烟草特有亚硝胺含量的关联分析及遗传筛选”(2010[99]18);国家烟草专卖局面上项目“烟草SSR标记的开发与青枯病抗性材料的鉴定筛选”(2011[151]19); 广东省烟草专卖局科技计划项目“烟草特有亚硝胺含量的关联分析及遗传筛选”(200903);广东省烟草专卖局科技计划项目“抗青枯病烟草资源筛选与基因型关联分析”(200905);广东省烟草专卖局科技计划项目“烟草SSR标记的开发与青枯病抗性材料的鉴定筛选”(201003)
摘    要:针对中国烟草栽培品种遗传基础狭窄的情况,分析烟草种资资源的遗传多样性将可为烟草新品种选育、引种和资源保护提供重要信息。据此,利用20个SSR引物组合,采用荧光SSR标记法对来自不同国家和地区的50个烟草种质材料的遗传多样性进行分析。研究结果显示,20对SSR引物在50份烟草种质中检测到81个等位变异,平均每个SSR为4.1,平均多态性位点比率为68.4%;其中引物PT20457的鉴别能力最高,它的扩增多态位点数为6个,多态位点比率为100%,PIC值为0.944。研究的UPGMA聚类分析结果在遗传相似系数约为0.65处将50份烟草种质明显分成了3个组群,组群Ⅰ中只有1个广东晒烟,组群Ⅱ包括2个白肋烟,组群Ⅲ包括来自4个国家的47个品种。主坐标分析将所有种质分成了4个组群8个亚类。2种分析方法均较好地揭示了烟草属种间或栽培种品种类型间的遗传多样性与亲缘关系,可为烟草遗传育种和遗传连锁图谱构建的杂交亲本选择提供科学依据。

关 键 词:蛋鸡  蛋鸡  产业升级  优势  劣势  机会  威胁  
收稿时间:2011/12/2 0:00:00
修稿时间:2012/1/13 0:00:00

Genetic Diversity Analysis for Tobacco Germplasm by Using Fluorescent SSR Technique
He Qifang , Li Ronghua , Guo Peiguo , Ning Zhengxiang , Qiu Miaowen , Zhao Weicai , Xia Yanshi , Bai Pan.Genetic Diversity Analysis for Tobacco Germplasm by Using Fluorescent SSR Technique[J].Chinese Agricultural Science Bulletin,2012,28(10):95-102.
Authors:He Qifang  Li Ronghua  Guo Peiguo  Ning Zhengxiang  Qiu Miaowen  Zhao Weicai  Xia Yanshi  Bai Pan
Institution:1 College of Life Science,Guangzhou University ,Guangzhou 510006; 2 College of Light Industry and Food Science,South China University of Technology ,Guangzhou 510641; 3 Nanxiong Research Institute of Guangdong Tobacco Co.Ltd. ,Nanxiong Guangdong 512400)
Abstract:According to the situation of narrow genetic background in Chinese tobacco cultivars,the genetic diversity analysis of tobacco germplasm could provide important information for breeding and introducing cultivars,and germplasm resource protection.In this study,genetic diversity analysis for 50 tobacco cultivars collected from different countries/regions were performed by using fluorescence SSR technique with 20 SSR primer combinations,a total of 81 allelic variations among the collected tobacco germplasm were detected with an average of 4.1 alleles per locus of each SSR.The result showed that the SSR combination of PT20457 possessed the highest values of polymorphism information content(PIC)(0.944) and could be effective locus for identifying DNA variation among these tobacco cultivars.Based on the polymorphic data,fifty tobacco cultivars were classified into 3 groups by UPGMA method.Group I contains Yunluo-01 which was sun-cured tobacco and derived from Guangdong,group II contained Atnarello Maoliang and Brazil Shailiang which were burley, group III contains 47 tobacco cultivars which were derived from 4 different countries.By using principle coordinates analysis,these tobacco varieties were clustered into 4 groups and 8 subgroups.Both cluster analysis methods markers revealed the genetic diversity and genetic relationships among tobacco varieties,and could provide a scientific basis for genetic research and tobacco breeding.
Keywords:tobacco  SSR  genetic diversity  fluorescence
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