| 基于ITS序列分析鉴定灵芝属菌种 |
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| 引用本文： | 黄龙花,杨小兵,张智,胡惠萍,张一帆,吴清平.基于ITS序列分析鉴定灵芝属菌种[J].中国食用菌,2010,29(1):55-57. |
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| 作者姓名： | 黄龙花 杨小兵 张智 胡惠萍 张一帆 吴清平 |
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| 作者单位： | 1. 广东粤微食用菌技术有限公司,广东,广州,510070;广东省微生物研究所,广东省菌种保藏与应用重点实验室,广东,广州,510070
2. 广东省微生物研究所,广东省菌种保藏与应用重点实验室,广东,广州,510070 |
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| 基金项目： | 广州市科技支撑计划项目，国际科技合作项目 |
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| 摘 要： | 针对11个本所保藏灵芝属菌株及9个灵芝属野生菌株的ITS序列,应用特异引物进行PCR扩增,对其产物进行测序,并从GenBank上下载2条赤芝(Ganoderma luncidum)、1条黑紫灵芝(Ganoderma japonicum)和1条无柄紫灵芝(Ganoderma mastoporum)的ITS序列,以猴头菇(Hericium erinaceum)为外类群,用NJ(Neighbor-Joining)法构建系统发育树,结果表明,20个灵芝属菌株聚为4个簇,其中赤芝组和树舌亚属的菌株各自聚为1组,其组内同源性均达99.7%以上,紫灵芝组的菌株分成2组:无柄紫灵芝和黑紫灵芝。系统发育分析也表明仅根据形态学特征难以将灵芝属菌株进行有效的分类,利用分子生物学的技术手段对灵芝菌株进行分类是一种更有效的方法,ITS序列分析在近缘种的分类鉴定上很有价值。
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| 关 键 词： | 灵芝属 ITS序列 系统发育树 鉴定 |
Identification of Ganoderma Spawns Based on ITS Sequence Analysis |
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| HUANG Long-hua,YANG Xiao-bing,ZHANG Zhi,HU Hui-ping,ZHANG Yi-fan,WU Qing-ping.Identification of Ganoderma Spawns Based on ITS Sequence Analysis[J].Edible Fungi of China,2010,29(1):55-57. |
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| Authors: | HUANG Long-hua YANG Xiao-bing ZHANG Zhi HU Hui-ping ZHANG Yi-fan WU Qing-ping |
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| Institution: | 1.Guangdong Yuewei Edible Fungi Technology Co., Ltd., Guangzhou Guangdong 510070; 2.Guangdong Institute of Microbiology, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangzhou Guangdong 510070) |
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| Abstract: | ITS sequence analysis of 11 preserved strains and 9 wild strains of Ganoderma spp. were investigated in this study. ITS sequences were produced from 20 strains of Ganoderma spp. by cloning sequencing of PCR products. Data were combined with ITS sequences from 6 related strains, including Ganoderma luncidum, Ganoderma japonicum, Ganoderma mastoporum and Hericium erinaceum, obtained from GenBank to construct a phylogenetic tree using the Neighbor-joining method with Hericium erinaceum as the outgroups. Four distinct groups were identified including the sect. Ganoderma, the sect. subgenus Elfvingia, the sect. Phaeonema. Similarity value among sects Ganoderma and subgenus Elfvingia strains were〉 99.7%. Analysis of molecu- lar data is a more effective and useful approach for studying the taxonomy of Ganoderma, and for establishing phylogenefic rela- tionships within the genus, compared to methods based on morphology of fruiting body. |
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| Keywords: | Ganoderma ITS sequences Phylogenetic tree Identification |
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