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杨树木质素合成酶hct基因的克隆及核苷酸序列分析
引用本文:王雪霞,曹方,薛永常.杨树木质素合成酶hct基因的克隆及核苷酸序列分析[J].辽宁林业科技,2009(6):4-7.
作者姓名:王雪霞  曹方  薛永常
作者单位:1. 大连工业大学,生物与食品工程学院,辽宁省发酵工程重点实验室,辽宁,大连,116034;石药集团中奇制药技术(石家庄)有限公司,河北石家庄052160
2. 大连工业大学,生物与食品工程学院,辽宁省发酵工程重点实验室,辽宁,大连,116034
摘    要:根据毛果杨全序列(AC185363.2)中唯一具有转移酶功能的保守区设计引物,以正在分化的2年生欧美杨107次生木质部总RNA为模板经RT-PCR扩增出hct基因片段,与pMD20-T载体连接,重组质粒经特异引物扩增、限制性内切酶酶切和测序鉴定。结果表明,扩增片段长度为709bp,包含一个708bp的开放阅读框,与毛果杨全序列及HCT2(EU603314)的同源性均为98%,编码的氨基酸序列与毛果杨HCT2氨基酸(ACC63883.1)的同源性为98%,断定我们克隆的cDNA为hct,属于转移酶超家族,GenBank登录号为FM202091,该重组质粒命名为pMD20-T-hct。

关 键 词:木质素  hct基因  cDNA克隆  序列分析

Cloning and sequence analysis of lignin biosynthetic enzyme hct gene in Poplar
WANG Xue-xia,CAO Fang,XUE Yong-chang.Cloning and sequence analysis of lignin biosynthetic enzyme hct gene in Poplar[J].Liaoning Forestry Science and Technology,2009(6):4-7.
Authors:WANG Xue-xia  CAO Fang  XUE Yong-chang
Institution:WANG Xue-xia, CAO Fang, XUE Yong-chang(1.The Key Laboratory for Fermentation Engineering in Liaoning Province,College of Biology and Food Engineering,Dalian Polytechnic University,Dalian 116034,China;2.Zhongqi Pharmacy in Shijiazhuang,Pharmaceutical Group Limited,Shijiazhuang 052160,China)
Abstract:Based on the full sequence conserved domain(transferase)of Populus trichocarpa(accession number:AC185363.2),a pair of primers was designed and used to amplify a fragment of hct(shikimate/quinate hydroxycinnamoyltransferase)gene by RT-PCR from poplar(Populus×euramericana cv.‘74/76 )developing second xylem RNA,then cloned into pMD20-T vector,identified by PCR amplification,restriction enzyme cutting, sequencing and named pMD20-T-hct.The sequence of the amplified DNA fragment was 709bp, containing a 708bp ORF (open reading frame). The identity of the fragment with Populus trichocarpa complete sequence and HCT2 both are 98%. Alignment with amino acid ofPopulus triehocarpa HCT2 showed that their homology was 98%. Therefore, we confirmed that the cloned DNA fragment was hct, belonged to transferase superfamily. It was submitted to GenBank and the accession number was FM202091 and named PMD20-T-hct.
Keywords:lignin  shikimate/quinate hydroxycinnamoyltransferase  cDNA cloning  sequence analysis
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