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鸡新城疫病毒F48E9强毒株NP基因的序列分析
引用本文:陈珍,施少华,程龙飞,傅光华,陈红梅,万春和,林芳,林建生,黄瑜.鸡新城疫病毒F48E9强毒株NP基因的序列分析[J].福建农业学报,2009,24(5):385-389.
作者姓名:陈珍  施少华  程龙飞  傅光华  陈红梅  万春和  林芳  林建生  黄瑜
作者单位:1. 福建省农业科学院畜牧兽医研究所,福建,福州,350013
2. 福建省农业科学院畜牧兽医研究所,福建,福州,350013;福建省畜禽疫病防治工程技术研究中心,福建,福州,350013
基金项目:国家自然科学基金资助项目,国家"973"子项目 
摘    要:根据GenBank登录的鸡新城疫病毒NP基因序列设计引物,利用RT—PCR对F48E9强毒株NP基因进行扩增,将扩增产物经纯化后连入pMD18-T载体,通过PCR和酶切鉴定出阳性重组质粒,经测序后获得F48E9 NP基因序列。经分析发现该基因的ORF总长为1470bp,编码489aa,NP蛋白有4个高度保守的Cys位点,分别位于第55、78、139、213位,且在401~440位和461~481位区域变异较大。将F48E9株与19株参考毒株的相应序列进行比较得到核苷酸序列同源性为87.9%~92.3%,氨基酸序列同源性较高,为92.2%~98.0%,遗传进化分析表明F48E9株相对独立,与参考毒株的遗传距离较远。

关 键 词:鸡新城疫病毒  F48E9株  NP基因  序列分析

Sequence analysis on nucleocapsid protein gene of velogenic chicken-origin Newcastle disease virus,F48E9 strain
CHEN Zhen,SHI Shao-hua,CHENG Long-fei,FU Guang-hua,Chen Hong-mei,WAN Chun-he,LIN Fang,LIN Jian-sheng,HUANG Yu.Sequence analysis on nucleocapsid protein gene of velogenic chicken-origin Newcastle disease virus,F48E9 strain[J].Fujian Journal of Agricultural Sciences,2009,24(5):385-389.
Authors:CHEN Zhen  SHI Shao-hua  CHENG Long-fei  FU Guang-hua  Chen Hong-mei  WAN Chun-he  LIN Fang  LIN Jian-sheng  HUANG Yu
Institution:CHEN Zhen~1,SHI Shao-hua~(1,2),CHENG Long-fei~(1,FU Guang-hua~(1,Chen Hong-mei~1,WAN Chun-he~1,LIN Fang~1,LIN Jian-sheng~1,HUANG Yu~(1,2) (1.Institute of Animal Husbandry and Veterinary,Fujian Academy of Agricultural Sciences,Fuzhou,Fujian 350013,China,2.Fujian Animal Diseases Control Techology Development Center,China)
Abstract:The nucleocapsid protein gene of velogenic,chicken-origin,Newcastle disease virus(NDV) F48E9 was amplified by RT-PCR based on a specific pair of primers designed according to the chicken-origin NDVs NP gene sequences published at GenBank.The purified RT-PCR products were cloned onto the pMD18-T vectors,and then,the positive recombinants had been identified by PCR and enzyme digestion.The sequencing results indicated that the F48E9 NP gene had an opening read frame of 1470nt in length with a coded polypeptid...
Keywords:Newcastle disease virus  F48E9 strain  nucleocapsid protein gene  cloning  
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