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我国部分地区猪繁殖与呼吸综合征病毒分离株ORF5基因的遗传变异分析
引用本文:李和平,吴发兴,郑忠屹,李晓成,陈德坤,黄保续.我国部分地区猪繁殖与呼吸综合征病毒分离株ORF5基因的遗传变异分析[J].中国动物检疫,2005,22(10):23-26.
作者姓名:李和平  吴发兴  郑忠屹  李晓成  陈德坤  黄保续
作者单位:1. 西北农林科技大学动物科技学院,陕西,杨凌,712100;农业部动物检疫所国家动物流行病学中心,山东,青岛 266032
2. 农业部动物检疫所国家动物流行病学中心,山东,青岛 266032
3. 东北农业大学动物医学学院,黑龙江,哈尔滨,150030
4. 西北农林科技大学动物科技学院,陕西,杨凌,712100
摘    要:参考Genbank发表的猪繁殖与呼吸综合征病毒(PKRSV)ATCC VR-2332的ORF5基因序列,设计并合成了一对引物.对来自福建、浙江、山东等地的PRRSV分离毒株进行RT-PCR扩增.获得约748bp的DNA片断,将其分别克隆入pMD18-T载体中,并进行测序。应用DNAStar软件分析所测序列,并与ATCCVR-2332、CH-1a、MLV、Lv等毒株的ORF5序列进行比较,结果表明:SHDl与F114、MLV、ATCCVR-2332同源性高达98.5%,与CH-1a同源性为91.0%,与其它毒株同源性为86.6%~88.4%;F114与MLV、ATCCVR-2332同源性为99.3%~99.7%.其余分离毒株在遗传关系上和CH-1a又分为明显的两个群.显示近年来各地PRRSV分离毒株与cH-1a株的遗传差异越来越大。

关 键 词:猪繁殖与呼吸综合征病毒  ORF5基因  系统发育进化树  变异  遗传变异分析  病毒分离株  部分地区  Genbank  分离毒株  PRRSV
文章编号:1005-944X(2005)10-0023-04

Analysis in Heredity and Variation of OPF 5 Genome Sequence of Wild Isolates of PRRS Viru sfrom Different Regions in China
Li HePing,Wu FaXing,Zheng ZhongYi,Li XiaoCheng,Chen DeKun,Huang BaoXu.Analysis in Heredity and Variation of OPF 5 Genome Sequence of Wild Isolates of PRRS Viru sfrom Different Regions in China[J].China Journal Of Animal Quarantine,2005,22(10):23-26.
Authors:Li HePing  Wu FaXing  Zheng ZhongYi  Li XiaoCheng  Chen DeKun  Huang BaoXu
Abstract:According to the sequence of ATCC VR-2332 strain of porcine reproductive and respiratory syndrome virus published by the Genbank, a pair of primers was designed for RT-PCR amplification of PRRSV isolates from Fujian,Zhejiang and Shandong, obtaining DNA fragment of about 748bp, which were cloned into pMD18-T vector respectively and sequenced. The sequences of ORF5 genes were analysed using DNA Star and compared with those of ATCC VR-2332,CH-la,MLV and LV strains,indicating that the homology was up-to 98.5 between SHD1 and FJ14, MLV, ATCC VR2332, 91.0% between SHD1 and CH-la and 86.6%-88.4% between SHD1 and other strains; 99.3%-99.7% between FJ14 and MLV,ATCC VR-2332.And the other isolates and CH-la were two distinct genetically. It is suggested that recent isolates of PRRSV are becoming move different from CH-la genetically.
Keywords:porcine reproductive and respiratory syndrome virus  OPFS gene  Phylogenetic tree  Variation
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