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1.
Seven strains of canine parvovirus (CPV) were isolated from affected dogs in Japan between 1999 and 2000, and their VP2 genes were genetically analyzed. Comparison of the predicted amino acid sequences of VP2 suggested that three field isolates corresponded to CPV type 2a, while the other four to CPV type 2b. The phylogenetic tree constructed from the VP2 genes showed that the newly isolated strains are classified into the cluster consisting of recent Japanese and Taiwanese field isolates, which are distinct from Vietnamese isolates, United States Isolates, or classical CPV type 2. These results suggest that the CPV transmission occurred between Japan and Taiwan in 1990s, and the offspring are still circulating in both countries.  相似文献   

2.
Fifty-five canine parvovirus type 2 (CPV) samples, 12 fecal specimens and 43 cell culture isolates, were examined for their genetic characteristics of VP2 gene. They were collected from the diseased dogs at various districts of Japan during 27 years from 1980 to 2006. A fragment of VP2 gene was analyzed by restriction fragment length polymorphism assay and DNA sequencing. The original antigenic type 2 of CPV (CPV-2) was no longer found in the samples since 1984, and two antigenic variants CPV-2a and CPV-2b replaced CPV-2 as predominant types for about 5 years from 1982. A new genetic variant of prototype CPV-2a with non-synonymous substitution at the VP2 amino acid residue 297 from Ser to Ala was first detected in 1987. New CPV-2b with the same amino acid substitution at position 297 as new CPV-2a was also detected from the samples collected in 1997. Since then new CPV-2b has been the predominant CPV over the field of Japan. Several additional amino acid substitutions were detected in the VP2 gene of some recent CPV strains. Neither CPV-2c(a), CPV-2c(b), nor "Glu-426" of the antigenic variants previously found outside the country was detected in any samples tested. Reactivity of new CPV-2a and 2b variants against antibodies produced by the current vaccine products was determined by a cross hemagglutination-inhibition test. The recent field CPV isolates reacted more efficiently to the antibodies produced in dogs vaccinated with the new CPV-2b vaccine strain than the conventional CPV-2 vaccine strain.  相似文献   

3.
Yuwen Y  Gao Y  Gao H  Qi X  Li T  Liu W  Wang X 《Avian diseases》2008,52(2):284-290
Nucleotide sequences of the VP2 gene of eight infectious bursal disease viruses isolated from vaccinated chicken flocks in the northeast of China were determined. The sequence analysis showed that all of the isolates were also characterized by the vvIBDV conserved amino acid residues: 222A, 256I, 294I, and 299S. Four of them had one amino acid change (D-->N) at position 212 in VP2 major hydrophilic peak A, while two of the four isolates had another one (A-->V) at position 321 in major hydrophilic peak B. The other isolates were similar to the UK661 strain. Our findings demonstrated that the vvlBDV strains in the northeast of China could be diverse.  相似文献   

4.
为了解广西南宁地区犬细小病毒（CPV）的流行现状与病毒变异情况,本试验对初步确诊为犬细小病毒病的12份阳性病料提取基因组DNA,以提取的基因组DNA为模板,通过PCR扩增VP2基因序列并测序,将12个阳性毒株样本VP2基因测序结果与GenBank中登录的17株国内外CPV分离株VP2基因进行同源性比对,采用Mega 7.0软件绘制遗传进化树,分析其病毒亚型和遗传进化情况。结果显示,成功扩增得到12个毒株样本的VP2基因片段,大小约1 755 bp,12株阳性样本毒株的VP2基因同源性在99.2%~100.0%之间,其中NN01与NN07、NN02与NN06同源性最高,为100.0%;阳性样本毒株与国内其他分离株VP2基因的同源性为97.6%~100.0%,其中NN08、NN10及NN04与CPV-ZJ1579同源性最高,均为100.0%,属于CPV-2a亚型;阳性样本毒株与国外代表性毒株同源性在98.1%~99.8%之间。遗传进化树分析表明,12个样本毒株中有3株属于CPV-2a亚型,3株属于CPV-2b亚型,6株属于CPV-2c亚型。这是继2018年初广西分离到CPV-2c型CPV后,首次发现南宁地区大规模流行CPV-2c亚型病毒,预示着CPV-2c亚型CPV在国内的流行正在增加。综上所述,广西南宁地区CPV-2a、CPV-2b与CPV-2c亚型并存,但CPV-2c亚型的比重比其他地区大,这也给该地区提供了新的防治信息,在实际CPV防控工作中除了对CPV-2a、CPV-2b等传统流行亚型的关注之外,更应该重视CPV-2c亚型CPV的防控。  相似文献   

5.
The presence of chicken anemia virus (CAV) in Slovenia was confirmed by inoculation of 1-day-old chickens without antibodies against CAV and isolation of the virus on the Marek's disease chicken cell-MSB1 line and by polymerase chain reaction (PCR). Experimental inoculation of 1-day-old chickens resulted in lower hematocrit values, atrophy of the thymus, and atrophy of bone marrow. CAV was confirmed by PCR in the thymus, bone marrow, bursa of Fabricius, liver, spleen, ileocecal tonsils, duodenum, and proventriculus. The nucleotide sequence of the whole viral protein (VP)1 gene was determined by direct sequencing. Alignment of VP1 nucleotide sequences of Slovenian CAV isolates (CAV-69/00, CAV-469/01, and CAV-130/03) showed 99.4% to 99.9% homology. The VP1 nucleotide sequence alignment of Slovenian isolates with 19 other CAV strains demonstrated 94.4% to 99.4% homology. Slovenian isolates shared highest homology with the BD-3 isolate from Bangladesh. Alignment of the deduced VP1 amino acids showed that the Slovenian isolates shared 100% homology and had an amino acid sequence most similar to the BD-3 strain from Bangladesh (99.6%) and were 99.1% similar to the G6 strain from Japan and the L-028 strain from the United States. The Slovenian isolates were least similar (96.6%) to the 82-2 strain from Japan. A phylogeneric analysis on the basis of the alignment of the VP1 amino acids showed that CAV isolates used in the study formed three groups that indicated the possible existence of genetic groups among CAV strains. The CAV isolates were grouped together independent of their geographic origin and pathogenicity.  相似文献   

6.
15个江苏省IBDV分离株,对其VP2高变区进行RT-PCR扩增、测序,得到约560bp长的片段。分析比较15个IBDV分离株与参考毒株的VP2高变区(AccI-SpeI)推断的氨基酸序列,构建进化树。氨基酸序列分析以及进化树分析表明,15个IBDV分离株是超强毒株。而且目前vvIBDVs在亚洲各个国家流行,且与欧洲国家的vvIBDVs的进化关系很近。  相似文献   

7.
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8.
Canine parvovirus (CPV) is highly contagious and can cause haemorrhagic enteritis and myocarditis in dogs. To understand the current epidemic situation of CPV in Jilin Province, China, a total of 44 fecal or intestinal tissue samples of pet dogs suspected of being infected with CPV from February 2018 to November 2019 in Changchun and Liaoyuan City, Jilin Province were collected.All of the 44 collected samples were tested positive to CPV-2 by a PCR assay. The sequencing and analyzing of complete VP2 genes showed that CPV-2c was the most prevalent variant (n = 31;70.4 %), followed by new-CPV-2a (n = 8;18.2 %), new-CPV-2b (n = 4; 9.1 %) and CPV-2 (n = 1; 2.3 %). Phylogenetic analysis revealed that the 31 CPV-2c strains in our study are closely related to local CPV-2c isolates in cluster I. The VP2 protein of the acquired CPV 2c strains all possessed the substitutions Ala5Gly, Phe267Tyr, Tyr324Ile, and Gln370Arg only one with a novel Arg481Lys mutation. These findings demonstrate that CPV-2c was the most prominent type of CPV circulating in Jilin in 2018–2019, clustered in a separate group that is far from the vaccine strains and suggest that further and extensive epidemiological investigation among pet dogs are warranted to provide information for usage and research of current vaccines.  相似文献   

9.
成都地区犬细小病毒VP2基因克隆分析及基因型鉴定   总被引：1，自引：1，他引：0  
根据GenBank中犬细小病毒(canine parvovirus,CPV)VP2基因序列设计合成两对特异性引物1F/1R和2F/2R,从疑似CPV感染病犬的粪便病料中提取DNA作为模板,分段扩增涵盖VP2基因的两个片段,大小分别为1325和758 bp,并进行克隆、测序,通过拼接得到11条长度为1755 bp的VP2基因完整序列。核苷酸同源性分析表明,扩增得到的11个完整VP2基因序列与GenBank中发布的21株国内外参考毒株比较,核苷酸同源性为96.2%~99.8%。采用DNAStar软件分析,预测VP2蛋白可能成为B细胞表位的区段位于Met1-Val38、Met73-Val82、Met96-Ala103、Lys151-Thr170、Gly235-Phe243、Leu294-Phe303、Ala359-Thr399、Ile469-His483、Ala503-Arg520、Lys570-Tyr584。将扩增获得的VP2基因编码的氨基酸序列与CPV参考毒株进行比较,第426位和第555位氨基酸残基分别为Asp和Val,鉴定出本试验得到的CPV基因型均为2a型,初步证实成都地区仍以CPV-2a为主要流行毒株。  相似文献   

10.
A novel peptide nucleic acid (PNA)-based array was developed for use in ante-mortem antigenic typing discrimination in dogs with canine parvovirus (CPV). Cyclic benzothiazole-2-sulfonyl PNA monomers were synthesized that recognized GTA (CPV-2) and TAT (CPV-2a, -2b and -2c) at the nt 913–915 positions, and AAT (CPV-2 and CPV-2a), GAT (CPV-2b), and GAA (CPV-2c) at the nt 1276–1278 positions of the VP2 gene. The detection limits for aa 305 and aa 426 of the VP2 proteins belonging to the four CPV antigenic types were determined optically to be 40–2000 DNA copies, and the optimal cut-off fluorescence signaling value was fixed at 5000. The PNA array described here was developed from 135 field dog fecal specimens and had 89.8% (62/69) sensitivity and 90.4% (66/73) specificity compared with a real-time PCR using the TaqMan assay, a gold standard method. This CPV PNA array could be used together with MGB probe assays as an attractive novel tool for ante-mortem antigenic typing discrimination.  相似文献   

11.
VP2 gene of a canine parvovirus (CPV) isolate from the feces of a puppy which was diagnosed to be CPV infection was analysed. The result indicated that this clinical isolate was phylogenetically close to the isolate of wild-type CPV (strain CPV-T37) prevailing in Taiwan rather than isolates from Japan.  相似文献   

12.
为研究贵阳地区犬细小病毒（canine parvovirus,CPV）的流行基因型及其遗传进化情况,本试验对从贵阳市分离的10株CPV的VP2基因进行PCR扩增和克隆并进行序列分析。结果显示,分离的病毒能使F81猫肾细胞产生明显的细胞病变（CPE）,分离的10株病毒中,7株为CPV-2a亚型,3株为CPV-2c亚型,命名为GY-1~GY-10。10株CPV分离株与疫苗株VP2基因的同源性98.4%~99.4%,与其他国内外参考株的同源性为97.7%~99.9%。本试验首次报道贵阳市CPV的流行基因型为CPV-2a亚型并伴随CPV-2c亚型存在,对监测CPV遗传变异趋势及疫苗的研制具有重要意义。  相似文献   

13.
OBJECTIVE: To determine the genetic variants of canine parvovirus-2 (CPV) present in domestic dogs in Australia and to investigate 26 cases of apparent vaccine failure. DESIGN: Thirty-three samples of faeces or intestinal tissues and 16 cell culture virus isolates collected over a period from 1980 to 2005 from five Australian states were analysed. Procedure DNA was extracted from the samples and a 1975 bp fragment of the VP1/2 gene of CPV was amplified by polymerase chain reaction (PCR) and sequenced. Sequences were compared to published strains of CPV-2, CPV-2a, CPV-2b and CPV-2c. RESULTS: Forty-one of 43 PCR-positive samples contained CPV-2a viruses. One sample collected in 2002 from a pup in northern NSW contained a CPV-2b virus. One sample that had been included in the study as a CPV-antigen negative control sample contained a CPV-2 virus. CONCLUSION: CPV-2a remains the predominant genetic variant of CPV in dogs in Australia and has not been replaced by CPV-2b or CPV-2c as in many other countries. The vaccine failures investigated in the study were likely caused not by genetic variation of field viruses but by maternal antibody interference in the response of pups to vaccination.  相似文献   

14.
This study was aimed to investigate popular genotype and phylogenesis of VP2 gene of canine parvovirus (CPV) in Guiyang area. Ten strains of viruses were isolated from Guiyang and the VP2 gene was amplified by PCR, cloned and sequenced. Results showed that the isolate virus grew could produce typical CPE in F81 cells, seven strains of CPV were CPV type 2a and others were CPV type 2c, named as GY-1 to GY-10. The nucleotide homologies of the isolated strains compared with 3 vaccine strains were 98.4% to 99.4%, with others reference strains nucleotide homologies within 97.7% to 99.9%.This research firstly reported the prevalence of CPV genotype was CPV type 2a in Guiyang area with such CPV type 2c, this was very important for monitoring the trend of CPV genetic variation and the development of vaccine.  相似文献   

15.
Seven avian polyomaviruses (APVs) were isolated from seven psittacine birds of four species. Their whole genome sequences were genetically analyzed. Comparing with the sequence of BFDV1 strain, nucleotide substitutions in the sequences of seven APV isolates were found at 63 loci and a high level of conservation of amino acid sequence in each viral protein (VP1, VP2, VP3, VP4, and t/T antigen) was predicted. An A-to-T nucleotide substitution was observed in non-control region of all seven APV sequences in comparison with BFDV1 strain. Two C-to-T nucleotide substitutions were also detected in non-coding regions of one isolate. A phylogenetic analysis of the whole genome sequences indicated that the sequences from the same species of bird were closely related. APV has been reported to have distinct tropism for cell cultures of various avian species. The present study indicated that a single amino acid substitution at position 221 in VP2 was essential for propagating in chicken embryonic fibroblast culture and this substitution was promoted by propagation on budgerigar embryonic fibroblast culture. For two isolates, three serial amino acids appeared to be deleted in VP4. However, this deletion had little effect on virus propagation.  相似文献   

16.
犬细小病毒的分离鉴定   总被引：3，自引：0，他引：3  
用猫肾(F81)细胞从沈阳某养犬场病死犬的肠内容物中,分离到1株细小病毒.根据犬细小病毒(CPV)VP2基因的核苷酸序列设计合成了两对特异性引物,对分离的病毒株进行PCR扩增,分别得到846 bp和815 bp的2个片段,PCR产物经纯化后测序,测序结果与GenBank中已发表的CPV参考株PLI-IV(typeFPV)、CPV-b(type2)、V154(type2a)、LCPV-V204(type2b)、LCPV-V139(type2c(a))和LCPV-V203(type2c(b))的VP2基因序列相比较,根据分析比较的数据结果,确定此株细小病毒为CPV-2a亚型.  相似文献   

17.
三株鸡传染性法氏囊病毒弱毒株的分离与分子鉴定   总被引：1，自引：0，他引：1  
本试验在江苏省鸡场分离获得3株鸡传染性法氏囊病病毒（IBDV）,采用RT—PCR法扩增VP2基因,将产物克隆入pMD18T载体,经测序,并与IBDV代表株VP2基因的高变区序列进行分析比较。结果显示,3个分离株与超强毒株、强毒株、突变株及弱毒株的核苷酸同源性在89．5％～98．9％之间,与弱毒株Cu-1和疫苗株PBG-98同源性最高,为98．9％;推导出的氨基酸序列与代表性毒株的同源性在98．2％～99．5％之间。其中,七肽区的第三个丝氨酸残基突变为精氨酸或苏氨酸,279和284位氨基酸残基突变为天冬氨酸和苏氨酸,222、294和299位氨基酸残基分别突变为脯氨酸、亮氨酸和天冬氨酸。上述试验表明3株分离株均为临床弱毒株。  相似文献   

18.
G8 bovine group A rotaviruses isolated in Japan were genetically and serologically characterized. The VP7 gene nucleotide and amino acid sequences revealed high identity with each other. All Japanese G8 strains were classified into the same lineage in the phylogenetic analysis based on VP7 gene sequences. Antisera to four Japanese G8 strains neutralized other G8 strains, but their neutralizing titers were between 8-fold lower and 2-fold higher than homologous strains. These results suggest that the VP7s of Japanese G8 strains have similar genetic and serologic characteristics. Observed differences in the neutralizing abilities of antisera for each strain appear to depend on differences in the P serotypes/genotypes.  相似文献   

19.
犬细小病毒病是一种高度接触性传染病,临床上以急性出血性肠炎和心肌炎为特征。为研究广州地区犬细小病毒病的流行亚型,本试验采集2011—2012年间疑似病犬粪便,进行犬细小病毒（canine parvovirus,CPV）分离鉴定,提取病毒基因组进行VP2基因扩增和序列分析,与GenBank中登录的参考毒株进行比对,结果发现,分离的8株CPV中SCAU-5为CPV-2b 亚型,其余为CPV-2a亚型。结果表明,2011—2012年间广州地区的流行毒株以CPV-2a亚型为主。  相似文献   

20.
First detection of canine parvovirus type 2c in South America   总被引：8，自引：0，他引：8  
Since its sudden emergence in the early 1970s, canine parvovirus type-2 (CPV-2) has been evolving through the generation of novel genetic and antigenic variants (CPV-2a/b/c and a number of additional mutations) that are unevenly distributed throughout the world. In order to develop strategies to control the spread of these variants and to understand virus evolution is fundamental to genotype field isolates from different geographic locations. In the present paper we have examined 25 isolates of CPV from clinical samples of Uruguayan dogs collected during year 2006. A fragment of the VP2 gene of the virus was analyzed using polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) and DNA sequence analysis. Out of the 25 isolates analyzed, only one was characterized as CPV-2a and 24 were characterized as CPV-2c, indicating that this type is currently the prevalent field CPV circulating in Uruguay. This is the first report of CPV-2c in the American continent and it also represents the highest frequency of this type observed in a dog population so far. Its presence in South American supports the assumption that CPV-2c is reaching a worldwide distribution as occurred with 2a/2b antigenic types.  相似文献   

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