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LA-PCR快速克隆传染性法氏囊病病毒基因组A节段全长cDNA方法的建立 总被引：4，自引：0，他引：4
从浙江省某鸡场暴发疑似传染性法氏囊病 (IBD)的法氏囊病料中分离到 1株致死率高达 70 %的强毒株 (IBDV-ZJ2 0 0 0 )。通过筛选 ,采用效果最理想的蛋白酶 K法从法氏囊中提取病毒基因组 RNA,经 L i Cl纯化后 ,优化各种反应参数和条件 ,建立了 L ong- accurate PCR(L A- PCR)一步直接扩增 IBDV A节段全长 c DNA的方法 ,得到一约 3.2 6 kb的片段。L A- PCR法能快速从病鸡法氏囊和细胞适应毒中扩增 A节段全长 c DNA,为研究各 IBDV毒株 A节段的结构和功能打下了基础。 相似文献
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采用蛋白酶 Ｋ 消化,酚、氯仿抽提的方法提取法氏囊匀浆和细胞培养液中的鸡传染性法氏囊病病毒（ Ｉ Ｂ Ｄ Ｖ）基因组 Ｒ Ｎ Ａ,用特异的寡核苷酸引物对其 Ｖ Ｐ２ 高变区进行反转录套式 Ｐ Ｃ Ｒ 扩增。应用该方法从一个法氏囊匀浆中即可特异地检出 Ｉ Ｂ Ｄ Ｖ Ｒ Ｎ Ａ,得到的扩增产物可用于分子流行病学的进一步分析,而从感染材料的处理到扩增结果的电泳检测,在两个工作日之内可轻松完成。本实验为法氏囊病病毒的诊断和分子流行病学的分析提供了一种快速、简便、可靠的手段。 相似文献
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F S Kibenge 《American journal of veterinary research》1992,53(8):1337-1342
Two nonoverlapping clones, pOH405 and pOH632, containing cDNA inserts in the VP2 coding region of genome segment A were selected from a cDNA library prepared from the double-stranded RNA genome of the OH strain of infectious bursal disease virus (IBDV) of serotype 2. Clone pOH405, which is located in the hypervariable segment of VP2, is 328 base pairs long, has nucleotide sequence homology of 72 to 73%, and amino acid sequence homology of 64 to 67% with IBDV strains of serotype 1. Clone pOH632, which is located in the highly conserved C-terminal part of VP2, is 230 base pairs long, has nucleotide sequence homology of 87 to 88%, and amino acid sequence homology of 100% with IBDV serotype 1. The lower detection limit of 32P-labeled probes prepared from both clones was 10 ng of OH-IBDV double-stranded RNA, using high-stringency conditions of hybridization (54 C, 50% formamide) and washing (55 C, 0.015M NaCl, 0.0015M trisodium citrate, pH 7.0, with 0.1% sodium dodecyl sulfate), and autoradiography for 24 hours. Under these conditions, the dot-blot hybridization assay for detection of serotype 2 IBDV double-stranded RNA, was 1,000 times more sensitive, using probe pOH632, but only 10 times more sensitive, using probe pOH405, compared with the assay for IBDV serotype 1, using the same probes. Thus, probe pOH632 could differentiate between the 2 IBDV serotypes by nucleic acid hybridization. 相似文献
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A cDNA library was prepared from the double-stranded RNA genome of the infectious bursal disease virus (IBDV) strain ST-C. The cDNA molecules were annealed into the plasmid pUC9 and used to transform Escherichia coli strain JM107. A cDNA clone that contained IBDV-specific nucleotide sequences was selected and designated STC-1. Radiolabeled probes were prepared from STC-1 and hybridized to genome segment A of ST-C in a northern blot hybridization assay. The STC-1 cDNA was 448 base pairs in length, and its nucleotide sequence indicated that it is located near the VP-2/VP-4 junction in IBDV genome segment A. Biotin-labeled probes were prepared from STC-1 and used in a dot-blot hybridization assay to detect IBDV. Under relatively low stringency conditions of hybridization, the biotinylated probes detected four subtypes of IBDV serotype 1 and a serotype 2 IBDV isolate. 相似文献
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本试验根据GenBank中登录的禽白血病病毒(ALV)基因组序列,设计合成了2对引物,外部引物的扩增片段大小为478 bp,内部引物的扩增片段大小为314 bp,建立了适合ALV快速检测的套式PCR方法(nested-PCR)。采用该方法对ALV毒株进行了检测,试验结果表明,能扩增到314 bp的条带,禽流感病毒(H9亚型)、新城疫病毒、传染性法氏囊病病毒、减蛋综合征病毒、禽网状内皮增生病病毒、禽呼肠孤病毒、马立克氏病病毒的扩增结果均为阴性。该方法第1次扩增的敏感性是100 pg,第2次扩增的敏感性是1 fg,第2次比第1次扩增的敏感性高105倍。所建立的套式PCR方法具有敏感性高、重复性好、特异性强等优点,可用于禽白血病病毒(ALV)的临床诊断和分子流行病学调查等。 相似文献
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Maw MT Yamaguchi T Ohya K Fukushi H 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2008,70(8):833-835
The prevalence of infectious bursal disease virus (IBDV) was studied in chickens, which had not been vaccinated against IBD. Fifty sera and forty-six bursae of Fabricius from chickens showing impaired growth, collected from 7 IBD vaccination-free farms in Japan were used for virus neutralization (VN) tests and RT-PCR for detection of IBDV genome corresponding to the VP2 hypervariable region. Of the fifty sera, 39 sera (78%) from 6 farms were VN antibodies positive. Of the forty-six bursae, 37 bursae (80.4%) from 6 farms were positive in the RT-PCR assay. The sequences of all the RT-PCR products detected in this study were closely related or identical to those of the vaccine strains. These results show that vaccine-like IBDV is prevalent even in IBD vaccine-free chicken farms in Japan. 相似文献
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本试验根据GenBank中登录的禽传染性贫血病毒(CAV)基因序列,设计合成2对引物,外引物的扩增片段大小为485 bp,内引物的扩增片段大小为297 bp,建立了适合CAV快速检测的套式PCR方法(nested PCR),并采用该方法对CAV阳性毒株及临床病料进行了检测。结果显示,该方法能扩增到297 bp的条带,禽流感病毒(H9亚型)、新城疫病毒、传染性法氏囊病病毒、禽网状内皮增生病病毒、减蛋综合征病毒、禽呼肠孤病毒、马立克氏病病毒的扩增结果均为阴性。该方法第1步扩增的敏感性是100 pg,第2步PCR扩增的敏感性是1 fg,敏感性提高了105倍。本研究建立的CAV套式PCR方法具有敏感性高、重复性好、特异性强等优点,可用于CAV的临床诊断和分子流行病学调查等。 相似文献
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Raj GD Thangavelu A Elankumaran S Koteeswaran A 《Tropical animal health and production》2000,32(3):173-178
The rocket immunoelectrophoresis (RIE) test was used for the qualitative detection and quantitative estimation of infectious bursal disease virus (IBDV) specific antigen in experimentally infected chickens and samples collected from suspected outbreaks. The IBDV specific antigen was detected in the bursae of experimentally inoculated chickens up to 5 days post infection (PI) by the agar gel precipitation (AGP) test and 7 days PI by the RIE test. The RIE detected IBDV specific antigen in a significantly greater number of samples collected from the field outbreaks than the conventional AGP test. Exudative bursae were found to have a higher antigen content than haemorrhagic bursae and are recommended as the material of choice for diagnosis of IBD. This test could also be used to quantify IBDV specific antigen in commercial killed vaccines. 相似文献
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According to the sequence of hexon gene of fowl adenovirus groupⅠ(FAVⅠ) strain published in GenBank,two pairs of primers were designed and synthesized.The outer primers amplified a fragment of 475 bp in length, and the inner primers amplification fragment was 237 bp in length. A nested PCR assay for rapid detection of FAVⅠ was established.A specific 237 bp fragment was amplified from DNA templates of FAVⅠstrain,but no bands were amplified with templates extracted respectively from avian influenza virus (AIV) subtype H9,Newcastle disease virus (NDV), infectious bursal disease virus (IBDV),duck plague virus (DPV), reticuloendotheliosis (REV), avian reovirus (ARV), Marek's disease virus (MDV). Sensitivity of the 1st and 2nd amplifications by the nested PCR assay were 100 pg and 1 fg,respectively.The sensitivite of the 2nd amplifications increased by 105 times.The results showed that the nested PCR was specific,sensitive,rapid,accurate,and could be used as a routine assay for the detection of FAVⅠ.This method had good reproducibility, specificity and sensitivity, and might detect low content FAVⅠ accurately and rapidly. This method could be used as a method for the diagnosis and detection of clinical cases,and molecular epidemiological investigation of FAVⅠ. 相似文献
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血清3型鸭甲型肝炎病毒实时荧光定量RT-PCR检测方法的建立与初步应用 总被引：1，自引：1，他引：0
通过对GenBank公布的鸭甲型肝炎病毒全序列比对,在3型鸭甲肝炎病毒（DHVA-3）5’非编码区的保守区,设计了一对检测引物和一条特异性TaqMan探针,以构建的阳性重组质粒经体外转录合成的RNA作为标准品绘制标准曲线,建立了一种快速检测DHAV-3的实时荧光定量RT—PCR方法。该方法能特异性地检测出DHAV-3,而与血清1型鸭肝炎病毒（DHAV-1）、鸭瘟病毒、新城疫病毒、禽流感病毒（H9）、呼肠孤病毒、传染性支气管炎病毒无交叉反应。在1．8×10^3～1．8×10^8copies／μL的检测范围内标准曲线线性关系较好,R2为0．992。敏感性试验表明,最低检测限为36拷贝数RNA。用该方法和胚半数致死量法对尿囊液中病毒含量进行检测,表明二种方法检测结果呈正相关。本研究所建立的检测方法特异性好,灵敏度高,且操作方便,可为该病毒的快速诊断和流行病学调查提供技术手段。 相似文献
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为获得可用于鸡传染性法氏囊病病毒(IBDV)抗体检测的重组抗原VP2蛋白,根据GenBank中发表的IBDV VP2序列设计一对特异性引物,应用RT-PCR技术克隆IBDV经典标准攻毒株(BC6/85株)的VP2基因,插入质粒pET-32a中构建重组表达质粒pET-32a-VP2,经IPTG诱导后获得了以包涵体形式表达的重组蛋白。重组蛋白纯化后,Western-blot检测表明具有良好的反应原性。本研究为下步建立IBDV抗体的间接ELISA方法及新型疫苗的研制奠定了基础。 相似文献
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根据GenBank登录的传染性喉气管炎病毒(ILTV)的TK基因序列设计并合成1对特异性引物,以ILTV疫苗株DNA为模板,建立了检测ILTV TK基因的PCR方法。应用该方法能从临床分离毒株和疫苗株中扩增到长为427 bp的目的片段;但不能从新城疫病毒(NDV)、传染性法氏囊病毒(IBDV)、禽呼肠孤病毒(ARV)、减蛋综合征病毒(EDSV)、H9亚型禽流感病毒(H9-AIV)、传染性支气管炎病毒(IBV)、大肠杆菌以及金黄色葡萄球菌等病原中扩增出阳性条带;敏感性试验表明其DNA最小检出量为4.9 ng;应用该方法和病毒分离法对2份临床病例和人工感染鸡的检测,两者符合率为100%。上述结果表明该PCR方法具有良好的特异性和敏感性,可用于传染性喉气管炎病毒鉴定和临床诊断。 相似文献