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Dorothea S. Borchardt H. Günter Welz Hartwig H. Geiger 《European journal of plant pathology / European Foundation for Plant Pathology》1998,104(6):611-617
Setosphaeria turcica is the causal agent of northern corn leaf blight, a foliar maize disease of worldwide economic importance. In Europe, its severity increases. To investigate the pathogen's population-genetic structure in central Europe, a total of 80 isolates was sampled in Germany, Switzerland, France, Austria, and Hungary and investigated with 52 random amplified polymorphic DNA (RAPD) markers. The mating type of the isolates was determined in testcrosses. Among the 73 isolates from maize there were 26 different RAPD haplotypes. All isolates with identical haplotype are considered clonemates. The haplotype shared by most members was represented by 22 isolates from Germany, Switzerland, and France, indicating high fitness and substantial migration. Only a single clone had members in both southeastern Austria and southwestern Switzerland, suggesting that the Alps constitute a major barrier for this pathogen. Several haplotypes differed by only one or two RAPD bands from the predominant haplotype and may have arisen by mutation. Few other clonal lineages were detected. The evolution of some haplotypes could not be explained by mutation alone. Sexual recombination may rarely occur. In population samples from Germany, Switzerland, and France, mating type MAT2 was predominating, while most isolates from Austria and Hungary had MAT1. Seven isolates from Johnson grass (Sorghum halepense), an alternative host of S. turcica, were clonemates and very different in RAPD haplotypes from all isolates collected from maize. 相似文献
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云南、贵州玉米大斑病菌生理小种分化研究 总被引：1，自引：0，他引：1
玉米大斑病是云南和贵州省玉米生产的重要病害之一。本文对2008年和2009年在云南、贵州采集分离获得的45份大斑病病菌菌株进行了生理小种鉴定,结果在云南共鉴定出12、13、3N、123、12N、13N、23N、123N等8个生理小种,其中123N小种出现频率最高,为30%;在贵州共鉴定出123、13N、23N、123N等4个生理小种,其中123N小种是主要小种类群,占53.3%。云南的大斑病菌菌株对Ht〖STBX〗1〖STBZ〗、Ht2、Ht〖STBX〗3〖STBZ〗和HtN基因的毒性频率分别为73.3%、73.3%、90%和80%,而贵州的菌株则分别为80%、80%、100%和93.3%。两省菌株的毒性随着抗性基因组合的复杂性增加而下降,对4基因组合的毒性频率分别为30%和53.3%;贵州的菌株毒性较云南菌株为高。云南的小种构成较复杂,而贵州小种的毒性更强。 相似文献
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玉米大斑病菌是异宗配合真菌，有性杂交有可能增强病菌的致病力，或形成新的致病小种，因此对该病菌有性杂交后代进行致病性测定和遗传多态性分析对控制该病菌的危害具有重要意义。对亲本菌株132、135和它们杂交产生的70个单子囊孢子F1代菌株进行了生理小种鉴定和AFLP（扩增性片段长度多态性）分析。生理小种鉴定结果表明，F1代菌株中与亲本菌株132（23N号小种）属于同一小种类型的占41．4％，与亲本菌株135（23号小种）相同的占20．0％，另外还出现了0、1、2、3、13、123、12N、13N和123N号小种，所占比例分别为2．9％、1．4％、2．9％、2．9％、4．3％、8．6％、1．4％、4．3％和10．0％，说明有性杂交可使后代菌株的致病性发生比较广泛的变异。AFLP分析表明，F1代菌株之间分子遗传相似系数在0．87～0．99之间，其中84．3％的F1代菌株与亲本菌株的遗传相似系数在0．878以上，但与亲本菌株132同源性较强的F1代菌株数目大约是与亲本菌株135的5倍，说明不同菌株具有不同的遗传传递能力。比较生理小种鉴定和AFLP分析结果，发现生理小种分化和AFLP分子遗传多态性间有一定的相关性，但不能完全对应，不存在遗传谱系就等于小种的简单对应关系。 相似文献
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Characterization by conventional techniques and PCR of Rhizoctonia solani isolates causing banded leaf sheath blight in maize 总被引：13，自引：0，他引：13
Rhizoctonia -diseased specimens were collected from various host species growing in or near maize fields in different geographic regions of the Philippines. A greater range of host species, with varying types of disease symptoms, was found in Mindanao than in Luzon. Fifty-two isolates belonged to anastomosis group AG1-IA and caused banded leaf and sheath blight in maize ( Zea mays ), but they showed considerable variation in virulence. The most and least virulent isolates recovered from maize were both collected from Mindanao. Isolates from necrotic spots/foliar blight of durian and coffee, which were collected from the same region, showed the lowest lesion heights. UPGMA-SAHN clustering analysis from RAPD fingerprint data of 30 haplotypes of R. solani AG1-IA isolates from the Philippines and Japan resolved seven groups of AG1-IA at the 75% similarity level. Variation among isolates from upland crops seemed to be partially correlated with geographical origin and virulence. In the case of paddy rice isolates from Japan and the Philippines, some were closely related, with over 75% similarity, suggesting a common origin. In PCR-RFLP analysis of the rDNA internal transcribed spacer region, no polymorphism was observed among the AG1-IA isolates but they were differentiated from subgroups AG1-IB and AG1-IC using the endonucleases Eco RI, Mbo I and Hin fI. 相似文献
6.
ABSTRACT The possibility that the Ht1 gene or genes tightly linked to Ht1 convey general resistance to races of Exserohilum turcicum that are virulent against Ht1 (i.e., residual resistance) could be useful in sweet corn where the Ht1 gene is present in many commercial hybrids and breeding populations. The objective of this study was to determine if the frequency of the Ht1 gene changed in populations of sweet corn selected for general resistance to E. turcicum race 1, thus conveying residual resistance. Four populations were developed with theoretical initial frequencies of the Ht1 gene of 0, 0.25, 0.25, and 0.5. The populations were advanced by recurrent mass selection with parental control through four or five cycles of selection following inoculation with an Ht-virulent race of E. turcicum (i.e., race 1). Plants from each cycle of each population were evaluated for severity of northern corn leaf blight (NCLB) and chlorotic lesion reactions following inoculation in field and greenhouse trials with either race 0 or 1 of E. turcicum. Recurrent mass selection for general resistance to E. turcicum race 1 reduced the severity of NCLB in all four populations of sweet corn, although the change in the most susceptible population was minimal. Percent gain per cycle was 14.5, 12.3, 14, and 3.7% for populations I, II, III, and IV, respectively. The Ht1 gene did not convey levels of general resistance to E. turcicum race 1 that were substantial enough to be selected for in this population improvement program. There was no apparent selection advantage for resistance to E. turcicum race 1 in the populations that contained the Ht1 gene. The frequency of the Ht1 gene did not differ among cycles of selection within any of the populations in response to improved levels of general resistance to NCLB. The lack of change in frequency of Ht1 in these populations and the similarity in gain per cycle among populations with and without Ht1 lead us to conclude that the Ht1 gene itself did not have a residual effect on resistance. 相似文献
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Idd Ramathani Moses Biruma Tom Martin Christina Dixelius Patrick Okori 《European journal of plant pathology / European Foundation for Plant Pathology》2011,131(3):383-392
In order to understand the underlaying causes of new severe turcicum leaf blight outbreaks in East Africa, a survey was undertaken
in Uganda to examine the sorghum—Setosphaeria turcica interaction in terms of disease severity and incidence, the overall fungal population structure, and new resistant resources.
Highest disease severities were recorded on caudatum accessions, whereas kafir genotypes were most resistant. The disease
was more severe in the most humid farmlands compared to moderately dry agro-ecologies. In districts with wide adoption of
the Epuripur variety a very high incidence (100%) of turcicum leaf blight was found. The two S. turcica mating type genes MAT1-1 and MAT1-2 assessed on fungal isolates deriving from both sorghum and maize diseased leaves were found in 20 of 23 districts sampled
and in equal proportions. Upon cross inoculation on maize differential lines, four S. turcica isolates were identified as race 1, two as race 2, and one isolate corresponded to race 0 and race 3, respectively. The remaining
10 S. turcica isolates did not cause any disease symptoms on the maize lines assessed. Highly resistant accessions originating from a regional
collection were found among the five sorghum races (kafir, guinea, caudatum, bicolor and durra), and are now implemented in
new sorghum disease resistance programs. 相似文献
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ABSTRACT Randomly amplified polymorphic DNA (RAPD) markers and mating type were used to examine regional population structure of Setosphaeria turcica in the eastern United States. Of 251 maize-infecting isolates studied, 155 multilocus haplotypes were identified using 21 RAPD markers. Twelve isolates of the most common haplotype were identified from seven states and represented 5.2% of the sample. Although variation in genetic diversity was greatest within states rather than between either regions or states within regions, multidimensional scaling based on average taxonomic distances among state samples showed a close association of samples from IL, OH, IN, IA, MN, MI/WI, and NC. Isolates from GA/SC, VA/TN, PA/NY, and FL were distant from this core group that included midwestern states and NC and were distinct from one another. The high genotypic diversity, near equal mating type frequencies, and gametic phase equilibrium in samples from several states are inconsistent with a strictly clonal population. The population genetic structure of S. turcica is likely the result of both asexual and sexual reproduction. It is not clear whether sexual recombination actually occurs in the eastern United States or occurs elsewhere in tropical America and recombinant genotypes migrate to North America. 相似文献
10.
ABSTRACT Specific primers and polymerase chain reaction (PCR) assays that identify Fusarium oxysporum f. sp. ciceris and each of the F. oxysporum f. sp. ciceris pathogenic races 0, 1A, 5, and 6 were developed. F. oxysporum f. sp. ciceris- and race-specific random amplified polymorphic DNA (RAPD) markers identified in a previous study were cloned and sequenced, and sequence characterized amplified region (SCAR) primers for specific PCR were developed. Each cloned RAPD marker was characterized by Southern hybridization analysis of Eco RI-digested genomic DNA of a subset of F. oxysporum f. sp. ciceris and nonpathogenic F. oxysporum isolates. All except two cloned RAPD markers consisted of DNA sequences that were found highly repetitive in the genome of all F. oxysporum f. sp. ciceris races. F. oxysporum f. sp. ciceris isolates representing eight reported races from a wide geographic range, nonpathogenic F. oxysporum isolates, isolates of F. oxysporum f. spp. lycopersici, melonis, niveum, phaseoli, and pisi, and isolates of 47 different Fusarium spp. were tested using the SCAR markers developed. The specific primer pairs amplified a single 1,503-bp product from all F. oxysporum f. sp. ciceris isolates; and single 900- and 1,000-bp products were selectively amplified from race 0 and race 6 isolates, respectively. The specificity of these amplifications was confirmed by hybridization analysis of the PCR products. A race 5-specific identification assay was developed using a touchdown-PCR procedure. A joint use of race 0- and race 6-specific SCAR primers in a single-PCR reaction together with a PCR assay using the race 6-specific primer pair correctly identified race 1A isolates for which no RAPD marker had been found previously. All the PCR assays described herein detected up to 0.1 ng of fungal genomic DNA. The specific SCAR primers and PCR assays developed in this study clearly identify and differentiate isolates of F. oxysporum f. sp. ciceris and of each of its pathogenic races 0, 1A, 5, and 6. 相似文献
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中国玉米大斑病菌生理分化及新命名法的初步研究 总被引：27，自引：0，他引：27
在分别含Ht1、Ht2、Ht3和HtN的单基因玉米鉴别寄主上测定了全国玉米各产区的百余份大斑病菌标样。结果表明,按传统方法命名的1号(或称0号)生理小种仍然是优势小种,占供试菌株的73.0%;2号(1号)生理小种占1.9%。虽然未出现已报道的3号(23号)、4号(23N号)和5号(2N号)小种,但特别值得注意的是出现了25.1%的未定名的新类群。为克服传统命名方法的局限性及指导抗病育种及品种布局,本文初步提出用毒力频率法分析玉米大斑病菌的生理分化状况,并进一步指明了不同致病类群在我国的分布频率及Ht基因的可用范围。 相似文献
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玉米大斑病菌黑色素的一些理化性质和光谱吸收特征 总被引：7，自引：1，他引：7
黑色素是某些植物和动物真菌病害的致病相关因子,不同来源的黑色素其生物合成途径可能不同。对玉米大斑病菌细胞壁结合黑色素和从培养滤液中提取的黑色素进行理化性质、紫外吸收光谱和红外光谱扫描测定,并与标准品黑色素进行比较分析,明确了玉米大斑病菌黑色素具有与标准品黑色素相似的理化性质。DHN黑色素的特异性抑制剂——三环唑,对玉米大斑病菌0号和1号小种黑色素的产生均有抑制作用;以玉米大斑病菌基因组DNA为模板,通过PCR扩增,得到了1,3,8-三羟基萘还原酶基因的同源片段,推测玉米大斑病菌黑色素合成于DHN途径。 相似文献
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Genetic differentiation in the French population of Erysiphe cichoracearum, a causal agent of powdery mildew of cucurbits 总被引：3，自引：0，他引：3
The relative incidence of Erysiphe cichoracearum and Sphaerotheca fuliginea , both agents of powdery mildew of cucurbits, was determined from 275 samples of mildewed leaves of cucurbits collected in 1994 from five regions of France. E. cichoracearum was identified in 9 to 39% of the mildewed leaf samples from four of the regions but was not detected in samples from the Mediterranean island of Corsica. The genetic structure of the French population of E. cichoracearum was examined using RFLPs of the ribosomal internal transcribed spacers amplified by PCR, random amplified polymorphic DNA (RAPD) markers, pathogenicity and mating-type tests. Forty-one isolates, including one from England, were analysed. Cluster analysis from 147 RAPD fragments using 16 primers revealed the existence of three distinct genetic lineages corresponding to three rDNA haplotypes (designated groups A, B and C). Bootstrap, genetic diversity, gametic disequilibrium and private allele analyses supported this differentiation. The genetic differentiation observed in the French population was not related to the geographical origin of the isolates. Group A isolates may be more specialized on melon as, with one exception, they were of race 1 (growth on four of the five melon cultivars tested) in comparison with group B and C isolates, which were of race 0 (growth on IranH only). Thus, the genetic differentiation observed may indicate a host-specialized subdivision within the French population of E. cichoracearum from cucurbits. Gametic disequilibrium analysis among RAPD loci and biological observations suggest that the sexual stage is of minor importance for epidemics of E. cichoracearum on cucurbits. 相似文献
14.
A set of differentials of corn plants(Zea mays L.) containing Ht1, Ht2, Ht3 or HtN genes was used to identify races ofExserohilum turcicum in Israel. Plants were inoculated with 14 isolates ofE. turcicum collected from various regions in Israel (from Ayyelet HaShahar in the north to Sa’ad in the south). Differentials containing Ht1, Ht2, Ht3 or HtN genes were resistant to the 14 isolates tested, whereas the inbred lines without Ht genes were highly sensitive. Resistance was characterized by the formation of non-sporulating chlorotic lesions. When plants containing Ht1, Ht2 or Ht3 genes were inoculated with relatively high inoculum concentrations (over 50 conidia/drop), chlorotic lesions were associated with necrosis in the center of the lesions. Sporulation of the fungus in the necrotic parts of the lesions was significantly less than on plants without Ht genes. No necrosis was observed in plants with the HtN gene. Our results indicate that the physiological race ofE. turcicum in Israel is race 1. 相似文献
15.
María del Mar Jiménez-Gasco Encarnación Pérez-Artés Rafael M. Jiménez-Diaz 《European journal of plant pathology / European Foundation for Plant Pathology》2001,107(2):237-248
Ninety-nine isolates of Fusarium oxysporum f. sp. ciceris (Foc), representative of the two pathotypes (yellowing and wilt) and the eight races described (races 0, 1A, 1B/C, 2, 3, 4, 5, and 6), were used in this study. Sixty isolates were analyzed by the RAPD technique using DNA bulks for each race and 40 primers. Bands presumably specific for a DNA bulk were identified and this specificity was confirmed by further RAPD analysis of individual isolates in each DNA bulk. Primers OPI-09, OPI-18, OPF-06, OPF-10, and OPF-12 generated RAPD marker bands for races 0, 1B/C, 2, 3, 4, 5, and 6. The reliability and utility of this procedure was validated in blind trials using 39 new Foc isolates. Ten of the 39 isolates had already been typed to race by pathogenicity tests and 29 were typed both by pathogenicity and RAPD testing in this study. In these blind trials, we assigned the 39 new isolates to a race solely on the basis of their RAPD haplotype. Thus, we concluded that Foc races 0, 1B/C, 5, and 6 can be characterized by the RAPD markers. Cluster analysis of the RAPD data set resulted in three clusters of isolates within Foc. The yellowing isolates were grouped in two distinct clusters which correspond to races 0 and 1B/C. The wilt isolates constitute a third cluster that included races 1A, 2, 3, 4, 5, and 6. These results provide a means of studying the distribution of Foc races, to assist in the early detection of introduced race(s) and to facilitate the efficient deployment of available host resistance. 相似文献
16.
Quirico Migheli Elena Briatore Angelo Garibaldi 《European journal of plant pathology / European Foundation for Plant Pathology》1998,104(1):49-57
The RAPD fingerprinting procedure was used in combination with pathogenicity assays on differential cultivars to characterize a representative collection of 72 Fusarium spp. isolates of different geographic origin collected from diseased carnation. In F. oxysporum f. sp. dianthi, isolates were grouped according to the physiologic race: group 1 included isolates of race 4; group 2 was formed by isolates of race 2 and single representatives of races 5 and 6; group 3 included isolates of races 1 and 8. No correlation was found between RAPD data and geographic origin of the isolates tested: representatives of race 2 isolated in Italy, Israel and Japan had the same amplification profile. Three isolates which showed a low level of pathogenicity on all carnation cultivars tested shared an identical amplification pattern and are probably saprophytic F. oxysporum. Finally, two F. redolens isolates from Japan and seven non-pathogenic isolates of F. proliferatum collected from diseased carnation in Italy, Israel and The Netherlands were clearly distinguishable according to their RAPD fingerprint. The results are discussed in relation to previous studies on the genetic diversity of F. oxysporum f. sp. dianthi and to the development of forma specialis- and pathotype-specific diagnostic tools. 相似文献
17.
Agus Purwantara André Drenth Sze P. Flett Wendy Guppy Philip J. Keane 《European journal of plant pathology / European Foundation for Plant Pathology》2001,107(3):305-311
The virulence spectrum of 112 isolates of Phytophthora clandestina collected from 56 sites in four subterranean clover-growing states in southern Australia was determined using differential cultivars of subterranean clover. Five races were detected, with race 0 in all states except New South Wales, race 1 in all states, race 2 only in Victoria, race 3 only in New South Wales, and race 4 in Victoria and Western Australia. The level of genotypic diversity among the different P. clandestina populations was investigated using five RAPD primers. Among 30 bands amplified, only two were polymorphic. This enabled identification of four multilocus RAPD genotypes. Three of the four genotypes occurred in all four states. Races 2 and 3 occurred with RAPD genotypes 1 and 2 only whereas races 0 and 1 occurred in all four multilocus RAPD genotypes. These results indicate that the pathogenicity spectrum of P. clandestina can change rapidly. 相似文献
18.
Jyuichi Shimazu Norihito Yamauchi Tadaharu Hibi Mamoru Satou Seizo Horiuchi Takashi Shirakawa 《Journal of General Plant Pathology》2005,71(3):183-189
By random amplified polymorphic DNA (RAPD) analysis of the representative isolates of each race of Fusarium oxysporum f. sp. lactucae, RAPD fragments of 0.6, 1.6, and 2.9kb were obtained. The 0.6-kb RAPD fragment was common to the representative isolates of all three races. Amplification of the 1.6- and 2.9-kb fragments were unique to the isolates of races 1 and 2, respectively. Sequence tagged site (STS) marker FLA0001, FLA0101, and FLA0201 were generated from the 0.6-, 1.6-, and 2.9-kb RAPD fragments, respectively. Polymerase chain reaction (PCR) analysis showed that FLA0001 was common to all 49 isolates of F. oxysporum f. sp. lactucae. FLA0101 was specifically generated from all 23 isolates of race 1 but not from races 2 or 3. FLA0201 was specifically amplified from all 12 isolates of race 2 but not from races 1 or 3. In two isolates of F. oxysporum f. sp. lactucum, PCR amplified FLA0001 and FLA0101 but not FLA0201. On the other hand, these STS markers were not detected from isolates of five other formae speciales. Because these STS markers were not generated from isolates of other plant pathogenic fungi, bacteria, or plant materials examined in this study, PCR analysis combined with the three STS markers should be a useful means for rapid identification of races of F. oxysporum f. sp. lactucae. 相似文献
19.
G. F. Kalc Wright D. I. Guest D. L. S. Wimalajeewa R. van Heeswijck 《European journal of plant pathology / European Foundation for Plant Pathology》1996,102(5):451-457
Isolates ofF. oxysporum collected from symptomless carnation cuttings from Australian carnation growers properties, together with isolates from national collections, were screened for pathogenicity and grouped according to vegetative compatibility and random amplified polymorphic DNA (RAPD) patterns. The collection of 82 Australian isolates sorted into 23 different vegetative compatibility groups (VCGs). Of 69 isolates tested for pathogenicity, 24 were pathogenic to carnations, while the remaining 45 were non-pathogenic. All pathogenic isolates were within two VCGs, one of which was also compatible with an isolate obtained from an international culture collection, and which is known to represent VCG 0021 and race 2. Race status of the two pathogenic VCGs remains unknown. The RAPD assay revealed distinct DNA banding patterns which could distinguish pathogenic from non-pathogenic isolates as well as differentiate between isolates from the two pathogenic VCGs. 相似文献
20.
Pathogenicity, vegetative compatibility and RAPD analysis of Fusarium oxysporum isolates from tobacco fields in Extremadura 总被引：1，自引：0，他引：1
Mª Carmen Rodríguez-Molina Mª Carmen Morales-Rodríguez Carolina Palo Mª Dolores Osuna Mª José Iglesias José Antonio García 《European journal of plant pathology / European Foundation for Plant Pathology》2013,136(3):639-650
Fusarium wilt of tobacco could be caused by Fusarium oxysporum f. sp. batatas or f. sp. vasinfectum since f. sp. nicotianae was rejected because there was no evidence of isolates specific to tobacco. Forty isolates of F. oxysporum from soil and plants from tobacco fields in Extremadura (south-western Spain) were characterized by pathogenicity on burley and flue-cured tobacco, for vegetative compatibility group (VCG), and by random amplified polymorphic DNA (RAPD). Isolates from burley were identified as race 1 of F. oxysporum f. sp. batatas based on pathogenicity on tobacco, sweet potato and cotton, and those from flue-cured as race 2. Most isolates from soil were heterokaryon self-incompatible (HSI) and the remaining isolates from soil and tobacco were grouped into four VCGs: VCG 1 (5 isolates from burley), VCG 2 (17 isolates from flue-cured and 4 from soil), VCG 3 (2 isolates from flue-cured) and VCG 4 (2 isolates from soil). This is the first report of the two races and VCGs of F. oxysporum f. sp. batatas in Spain. Analysis of RAPD revealed two clusters (C-I and C-II) related to race and VCGs. C-I included race 1 (VCG 1) isolates from burley and nonpathogenic (VCG 4 or HSI) isolates from soils. C-II included nonpathogenic (VCG 2) and race 2 (VCG 2 or VCG 3) isolates from flue-cured. VCG and RAPD markers were effective in distinguishing race 2 from race 1, suggesting that there are two genetically differentiated groups of F. oxysporum f. sp. batatas on tobacco in Extremadura. 相似文献