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1.
为了提高检测效率,本研究利用环介导等温扩增技术(loop-mediated isothermal amplification,LAMP)扩增核酸,用横向流动试纸条(lateral flow dipstick,LFD)检测产物,建立了一种山茶根结线虫(Meloidogyne camelliae)的LAMP-LFD快速检测新技术.以山茶根结线虫核糖体DNA内转录间隔区(ribosomal DNA-intemal transcribed spacer,rDNA-ITS)为检测靶标,设计3对特异性引物进行生物素标记的实时荧光LAMP反应,优化后的LAMP扩增条件为63℃反应15 min.比较LFD、实时荧光曲线以及琼脂糖凝胶电泳等3种产物检测方法,结果表明,LAMP产物与异硫氰酸荧光素(fluorescein isothiocyanate,FITC)标记的探针ITS-HP杂交5 min后即可在LFD上显色,从LAMP反应开始到LFD结果判断仅需25min,比常规PCR技术缩短约2h.LAMP-LFD技术能特异性地检测山茶根结线虫,对其基因组DNA的检测灵敏度为4 pg/μL,低于常规PCR方法100倍;对其单条2龄幼虫(J2)检测灵敏度为1/1 000条线虫.本研究建立的快速、灵敏、特异性LAMP-LFD检测技术可应用于山茶根结线虫的口岸检验. 相似文献
2.
由荔枝霜疫霉(Peronophythora litchii)引起的荔枝霜疫霉病是荔枝(Litchi chinensis)生产上的重要病害,建立霜疫霉快速准确检测方法,对于该病的早期诊断和及时防控至关重要.本研究以荔枝霜疫霉三磷酸鸟苷(GTP)结合蛋白基因(GTP-binding protein gene,Ypt1)为靶序列,设计特异性引物,建立了巢式PCR和环介导等温扩增(loop-mediated isothermal amplification,LAMP)两种检测方法,并进行特异性和灵敏度验证.特异性检测表明,只有不同来源的21个荔枝霜疫霉菌株经PCR扩增获得249 bp的特异性条带,同时,在钙黄绿素指示剂的作用下,LAMP检测显示绿色,且扩增产物用2.0％琼脂糖凝胶电泳出现特有的梯形条带,而其他13种不同卵菌近缘种及8种常见病原真菌42个菌株均未观察到这些现象.灵敏度检测显示,将特异引物PvYF1/PvYR1与疫霉属Yptl通用引物Yph1F/Yph2R进行巢式PCR扩增后,其检测灵敏度在DNA水平上可达100fg/25 μL,较常规PCR提高1 000倍,而LAMP方法检测灵敏度是巢式PCR的10倍.本研究分别采用常规PCR、巢式PCR和LAMP方法对采集自福建省荔枝霜疫霉病典型症状及可疑症状的荔枝叶片或果实进行检测,并用传统分离方法进行验证.结果表明,在漳州采集的30份样品中,常规PCR、巢式PCR和LAMP方法的阳性检出率分别为17/22(77.3％)、20/22(90.9％)和21/22(95.5％);在莆田采集的25份样品中,常规PCR、巢式PCR和LAMP方法的阳性检出率分别为15/17(88.2％)、16/17(94.1％)、17/17(100％).可见LAMP方法明显提高了检测效率,并且具有检测程序便捷,所需设备简单和肉眼能判断结果的优势,适合基层部门及田间荔枝霜疫霉快速检测. 相似文献
3.
伪狂犬病毒(Pseudorabies virus,PRV)传统诊断方法具有程序繁琐、周期长、成本高、特异性差等缺点,本实验建立了敏感、特异的PRV的环介导等温扩增(loop-mediated isothermal amplification,LAMP)检测方法,并在此基础上应用金属离子指示剂羟基萘酚蓝(hydroxy naphthol blue,HNB)进行反应结果判定.实验选取保守性较高的gB基因(glycoprotein B,糖蛋白gB)筛选引物,确定反应体系后,可在45 min内完成检测.LAMP方法特异性与PCR方法一致,敏感性是PCR方法的100倍,最低能够检测10个拷贝的目的基因.在HNB的应用试验中,发现LAMP反应体系中,HNB浓度为150 μmol/L时,阴阳性的颜色对比明显且反应的敏感性最高,可用于LAMP扩增产物的判断.临床样本的检测结果表明,PCR方法和LAMP方法的检出率一致.因此,本研究中所建立的LAMP方法是一种高度特异敏感的,可替代PCR方法的检测技术. 相似文献
4.
环介导等温扩增(loop-mediated isothermal amplification,LAMP)是一种快速、灵敏度高和特异性强的等温核酸扩增技术,已被广泛用于各领域.与此同时,高灵敏度也使得扩增时极易出现交叉污染,而利用闭管检测技术能有效降低其污染机率.本研究引入了一种新型的金属指示剂-酸性络蓝K (acid chrome blueK,ACBK),建立了闭管LAMP扩增和检测结果可视化检测技术.首先,本研究分别在LAMP 扩增的起始体系中,先后分别测试ACBK与缓冲液、dNTPs、引物和Mg2+等组分反应,确定了含有ACBK的LAMP体系中的颜色变化由Mg2+决定,化学方法也进一步验证了这一结论.随后,对LAMP检测体系中的ACBK指示剂的浓度及Mg2+的浓度进行了选择和优化,最终选定25 μL扩增体系中ACBK的检测浓度为:2 μL 0.04％ ACBK,Mg2+浓度为:6 mmol/L.以胭脂碱合成酶基因终止子(terminator of nopaline synthase gene,TNOS)为靶基因,建立了TNOS-ACBK-LAMP检测体系.建立的体系的检测灵敏度针对转基因水稻的检测限为100拷贝,在分别含有50 ng的水稻(Oryza sativa)、大豆(Glycine max)、油菜(Brassica napus)和玉米(Zea mays)基因组中能检测出0.1％的转基因含量.同时,利用不同转化事件及不同作物的转基因材料验证了其检测特异性,结果表明,构建的TNOS-ACBK-LAMP的检测系统具有很强的检测特异性.最终,将该检测体系成功用于对实际玉米样品转基因成分的检测,检测结果既可以裸眼直接判断也可以借助紫外可见光谱分析.该方法的建立为可以加快转基因成分检测的速度,同时也为等温扩增方法的判断提供了新的思路. 相似文献
5.
利用环介导等温扩增技术快速检测水产品中的副溶血弧菌 总被引：7，自引：0，他引：7
副溶血弧菌(Vibrio parahaemolyticus)是一种重要的食源性致病菌。首次将环介导等温扩增技术（Loop-Mediated Isothermal Amplification, LAMP）应用于副溶血弧菌的快速检测。针对副溶血弧菌不耐热溶血毒素基因（tlh）设计四条特异性引物,建立了副溶血弧菌LAMP检测方法,1 h即可完成。对12种细菌共28株菌进行LAMP扩增,仅副溶血弧菌得到阳性结果,证明引物具有很高的特异性;副溶血弧菌基因组DNA和纯培养物的检测灵敏度分别为90 fg/LAMP反应体系和24 cfu/mL,对模拟食品样品进行直接检测,检测限为89 cfu/g;对40份水产样品进行检测,8份副溶血弧菌LAMP阳性,其中6份传统培养阳性。本研究表明,该方法检测副溶血弧菌特异性强、灵敏度高,并且操作简便、快捷、检测成本低,有望发展成为快速检测副溶血弧菌的有效手段。 相似文献
6.
牛支原体(Mycoplasma bovis是感染牛的一种重要的致病性病原体.本研究利用环介导等温扩增(loop-mediated isothermal amplification,LAMP)技术建立了牛支原体的快速检测方法.该方法以牛支原体保守性基因uvrC为靶序列设计了5条特异引物,在58℃等温条件下,60 min即可完成反应.LAMP方法能检测出20 pg牛支原体DNA,较PCR方法高100倍,用牛鼻支原体(M.bovirhinis)、无乳支原体(M.agalactiae)、精氨酸支原体(M.ariginini)、牛副流感病毒(BPIV)、牛腺病毒(BADV)、牛传染性鼻气管炎病毒(IBRV)作特异性检测,两种方法均有很高的特异性.本研究还将荧光显色剂钙黄绿素(calcein)和Mn2+用于LAMP反应结果的可视化检测.临床鼻拭子样品煮沸后,可直接进行等温扩增,省去了DNA提取步骤.在对167个临床鼻拭子样本的检测中,LAMP方法检测结果阳性率(26.95％)高于PCR方法检测出阳性率(19.16％),这证明本研究所建立的方法,与PCR法比较更适于临床样品的检测.研究结果表明,LAMP方法具有操作简便、快速、高效、敏感、特异、经济等特点,适于基层实验室监测的广泛使用. 相似文献
7.
DNA环介导恒温扩增(loop-mediated isothermal amplification,LAMP)技术是一种特异、灵敏、快速的新型基因检测技术,其检测结果可以通过琼脂糖凝胶电泳观察,也可以通过加入核酸染料SYBR GreenⅠ进行肉眼观察。本研究根据对虾白斑综合征病毒(White spot syndrome virus,WSSV)的结构蛋白VP26基因序列,设计一套引物,成功建立了针对WSSV的LAMP检测方法。应用该方法,在65℃温育1h的条件下快速扩增病毒基因组DNA,琼脂糖凝胶电泳得到特异性梯度条带;在反应体系中添加SYBR GreenⅠ染料后,可通过肉眼观察有无荧光直接判定结果。该研究建立的LAMP法能特异性检出WSSV,其检测下限比PCR法低一个数量级,相当于0.563pg/μL的质粒(pMD19-T-VP26)浓度。表明所建立的WSSV LAMP检测法特异性好、灵敏度高、操作简单方便,有望作为WSSV快速诊断的常规方法。 相似文献
8.
环介导等温扩增技术(LAMP)快速检测转基因玉米LY038 总被引：3，自引：0，他引：3
为了施行对转基因作物的监管,许多国家和机构制定了转基因标识制度的相关条例,因此建立针对转基因产品的检测方法是十分必要的.本研究运用环介导等温扩增技术(LAMP)建立了对转基因玉米(Zea mays L.) LY038外源基因的快速检测技术,该方法依据cordapA基因的序列设计了4条特异性引物,结果表明,引物特异性良好,该检测体系在63℃恒定温度下,反应50 min,可检测到0.01％的样本,是常规PCR方法的5倍.该检测方法具有高度的特异性、灵敏性和稳定性,该方法不需要特殊仪器、快速简便,在基层和现场检测中有很好的应用前景. 相似文献
9.
荧光显色在环介导等温扩增（LAMP）检测猪繁殖与呼吸综合征病毒的应用 总被引：5，自引：0，他引：5
介绍了一种应用荧光显色的猪繁殖与呼吸综合征病毒(Porcine reproductive and respiratory syndrome virus,PRRSV)反转录环介导等温扩增(RT-LAMP)的检测方法.该方法使用了针对靶序列M+N基因的一组引物,并且能在63 ℃等温条件下30 min内完成反应.在敏感性检测中RT-LAMP与RT-PCR都能检测103个包含靶基因片段的重组质粒.几种其它病原的核酸也被用来比较这两种方法的特异性,两种方法只能检测PRRSV.在荧光显色剂应用试验中,证实0.05 mmol/L钙黄绿素以及0.6 mmol/L锰离子可以用于LAMP扩增产物的判断,并且其判断结果与浊度判断结果一致.在对103个临床血液样本的检测中,RT-LAMP与RT-PCR检出的阳性样本数量分别是56个和48个.结果说明,应用荧光显色剂的RT-LAMP检测方法可以快速检测PRRSV. 相似文献
10.
姜玲 《农业生物技术学报》2007,15(3)
利用地高辛(DIG)标记和碱性磷酸酶直接标记的cDNA探针核酸分子杂交及RT－PCR方法对番木瓜环斑病毒(PRSV)进行了检测。根据Genebank发表的PRSV中国Sm株系的外壳蛋白基因序列，设计特异引物，以美中红（Carica papaya L. cv. Meizhonghong ）带病样品的RNA为模板进行RT-PCR扩增反应,将其目的cDNA片段克隆到pGEM-T easy 质粒载体上，并测序。以重组质粒作模板，用PCR－DIG标记方法制备cDNA探针，另一种非放射性探针是经凝胶电泳分离、纯化cDNA片段，用碱性磷酸酶直接进行标记。结果表明，(1)美中红No.2序列与中国优势株系Sm的同源性为94.7%；(2) DIG标记的三种cDNA探针（861bp，455bp和215bp）对样品的总RNA检测结果是一致的, 且861bp的探针杂交斑点最为清晰，上述核酸杂交结果与RT－PCR检测结果相符, 核酸分子杂交检测的灵敏度和特异性能满足常规检测的需要；(3)碱性磷酸酶直接标记861bp的cDNA探针可进行PRSV的斑点杂交检测，而455bp的cDNA片段用碱性磷酸酶直接标记时，不能获得有效的杂交结果；(4)本试验还用DIG标记探针对叶脉进行了印迹杂交检测,结果与RT－PCR检测结果相符。 相似文献
11.
Yanbing Li Xueming Xiao Yong Chen 《Communications in Soil Science and Plant Analysis》2017,48(21):2526-2533
Aluminum (Al) toxicity represents one of the main yield-limiting factors for crops in acid soils. Silicon (Si) is known to increase tolerance in higher plants. This study was conducted to determine whether treatment with Si could improve nutrient uptake by peanut under Al stress. Peanut (Arachis hypogaea L. cv Zhonghua 4) was raised with or without Si (1.5 mM) in the growth chamber under 0 and toxic Al (0.3 mM) levels. Aluminum stress significantly decreased the root- and total-dry weight by 52.4% and 32.0%, respectively. The content of nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), and magnesium (Mg) was significantly decreased, but that of Al increased markedly in shoots and roots after Al exposure at seedling, flower-needle, and pod-setting stage. Silicon alleviates Al toxicity in peanut plants in relation to Al distribution and allocation of tissue P, K, Ca, and Mg by favoring the partitioning of dry mass to roots. 相似文献
12.
Luong Bui Bich Hanh Phung Thi My Rinh Pham Dinh Trang Pham Minh Thang Do Trong Stephen Harper 《Communications in Soil Science and Plant Analysis》2019,50(1):102-107
Inductively coupled plasma-mass spectroscopic (ICP-MS) analysis of leaves from 22 cabbage crops in the Sa P? and B?c Hà districts of Láo Cai Province, North-Western Vi?t Nam, revealed unexpectedly high concentrations of chromium (Cr) and nickel (Ni). The concentrations were strongly linearly related (r2 = 0.94), indicating sample contamination during grinding through a stainless-steel hammer mill. We tested this hypothesis in two ways. First, brown rice ground through the same mill was contaminated not only by Cr and Ni, but also cobalt (Co), iron (Fe) and molybdenum (Mo). Second, scanning electron microscopy/energy dispersive analysis of x-rays (SEM/EDS) of the ground samples revealed small fragments with co-located Fe, Cr and Ni, consistent with stainless steel wear fragments. Other grinders may perform differently and we suggest that quality assurance protocols for trace metal analysis of plants should include testing for grinder wear metals. Lastly, brown rice appears to be convenient for investigating contamination of plant tissues during grinding. 相似文献
13.
模拟降雨条件下污染土壤中重金属元素径流迁移特征 总被引：6，自引：0，他引：6
探明污染土壤中重金属元素随地表径流迁移特征,对于防控重金属污染物的迁移扩散具有重要意义。通过室内模拟降雨试验,研究不同降雨强度下(55,100,120mm/h)污染土壤中Cd、Pb和Cr随地表径流迁移的特征。结果表明:径流中3种重金属元素总量在产流的前20min内逐渐降低,随后趋于稳定;产流初期(产流10min内)颗粒态重金属占径流重金属总量的比例均在80%以上;随产流时间延长,颗粒态Cd和Cr对径流重金属的贡献率快速降低,其颗粒态/溶解态的比值范围分别为47.0～0.4和12.9～0.4,而Pb则主要以颗粒态的形式存在,溶解态Pb对其随径流迁移的贡献率可忽略不计;随降雨强度增大,径流中总Cd和Pb含量显著降低,而径流中总Cr含量以及溶解态重金属含量无明显变化规律。 相似文献
14.
Information is scant on the effect of humic acid (HA) on physiological, antioxidant and photosynthesis attributes of gerbera plants undergoing nutrient deficiency in culture solution. Gerbera plants cv. Malibu were grown in a factorial experiment based on a completely randomized design with 3 replications, using 3 different nutrient solutions [complete nutrient solution (NSc), 25% NSc (NS1), and 50% NSc (NS2)] treated with 2 levels of humic acid [0 (HA0) and 500 mg/l (HA1)].The interaction effect of HA and NS showed that HA improved the flower number in NSc, the transpiration in NS1+HA1, photosynthesis rate in NSc+HA1, stomatal conductance (gs) in NS2, mesophyll conductance of leaves in all NS levels and photosynthetic water use efficiency in NSc+HA1. The interaction effect of nutrient solution and HA on antioxidant activity was inconclusive, malondialdehyde content was the highest in NS2 and the lowest in NS1+HA1. The peroxidase activity increased in complete nutrient solution with and without HA and there were no differences among other treatments. Superoxide dismutase activity increased in NS1 and complete nutrient solution with HA and reached the highest in NSc. Humic acid was more effective in nutrient uptake, i.e., nitrogen, phosphorus, potassium, calcium, zinc, and iron (N, P, K, Ca, Zn, and Fe) in complete nutrient solution compared to NS1 and NS2. Conclusively, humic acid can compensate the nutrient deficiency stress of the culture solution in regards to protein synthesis, photosynthesis attributes regardless of the nutrient uptake of gerbera. 相似文献
15.
氮磷钾不同配比对饲用稻威优198产量及糙米蛋白含量的影响 总被引：2，自引：1，他引：1
采用田间小区试验研究“推荐配比”(N:P2O5:K2O比率为190:90:100 kg hm-2)、“高氮量配比”(N:P2O5:K2O比率为210:90:100 kg hm-2)、“低氮量配比”(N:P2O5:K2O比率为170:90:100 kg hm-2)以及“常规配比”(N:P2O5:K2O比率为216:112.5:202.5 kg hm-2)4种氮、磷、钾配比施肥对饲用稻威优198蔗糖合成酶(SUS)、腺苷二磷酸焦磷酸化酶(AGPase)、硝酸还原酶(NR)、谷氨酰胺合成酶(GS)以及产量和糙米蛋白质的影响。结果表明:“推荐配比”能提高不同生育时期水稻功能叶(旗叶)和粒籽中碳、氮代谢关键酶的活性,这些关键酶活性的变化显著影响水稻产量和糙米全氮以及蛋白氮的含量。统计(P0.05)结果证实“推荐配比”能提高水稻产量达到8200 kg hm-2,与“常规配比”相比产量提高了24.81%;“推荐配比”糙米全氮和蛋白氮含量分别达到22.70 g kg-1和21.98 g kg-1,与“常规配比”相比差异显著,并且其全氮和蛋白氮含量分别提高17.01%,18.38%。 相似文献
16.
Kulvir Singh Harinder Pal Singh Sudhir Kumar Mishra 《Communications in Soil Science and Plant Analysis》2020,51(7):919-931
ABSTRACTDelayed sowing and imprecise application of irrigation water to cotton has been the major hurdle in sustaining cotton yield in north-western India. Therefore, studies were initiated to ascertain the impact of heavy or normal level of presowing irrigation (PSI), scheduling time of first postsowing irrigation (POSI) under two sowing dates (SDs) on cotton arranged in a split block design replicated thrice. PSIh (100 mm) recorded 23.2% higher seed cotton yield over PSIn (70 mm) owing to better yield attributes and higher stand. First POSI at 4 weeks after sowing (WAS) resulted the highest yield (3072 kg ha?1), while one at 6 WAS (POSI6) recorded least due to poor population and reduced yield attributes. Water productivity under POSI6 was lesser by 29.1%, 25.2%, and 16.2% as compared to POSI3, POSI4, and POSI5, respectively. April sown crop out yielded the May sown cotton crop by 939 kg ha?1 due to better yield attributes. Nitrogen factor productivity (NFP) among SD remained higher by 23.3% for April as compared to May sowing. PSIh exhibited better NFP over PSIn. POSI6 recorded least NFP by 24.4%, 28.5%, and 16.3% as compared to POSI3, POSI4, and POSI5, respectively and was indicative of relatively poor utilization of N under delayed schedules. Therefore, planting in April after heavy PSI and scheduling first POSI at 4 WAS is best strategy for sustaining cotton yield and maximizing farmer profitability. 相似文献
17.
Andrew D. Cartmill Alejandro Alarcón Luis A. Valdez-Aguilar 《Journal of plant nutrition》2013,36(9):1517-1540
ABSTRACT High bicarbonate (HCO3 ?) of irrigation water can be detrimental to plant growth in sustainable horticultural production systems. The ability of arbuscular mycorrhizal fungi (AMF), ZAC-19, (composed of Glomus albidum, Glomus claroideum, and Glomus diaphanum) to enhance tolerance to HCO3 ? was tested on Rosa multiflora cv. Burr. Arbuscular mycorrhizal colonized and non-inoculated (non-AMF) plants were treated with 0, 2.5, 5, and 10 mM HCO3 ?. Increasing HCO3 ? concentration and associated high pH and electrical conductivity (EC)—reduced plant growth, nutrient uptake, and acid phosphatase activity, while increasing alkaline phosphatase activity (ALP). Inoculation with AMF enhanced plant tolerance to HCO3 ?, as indicated by greater growth (leaf, stem, and total plant dry weight, leaf area and leaf area ratio), leaf elemental concentration [nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), iron (Fe), zinc (Zn), aluminum (Al), boron (B)], leaf chlorophyll concentration, higher mycorrhizal inoculation effect, lower root Fe reductase activity, and generally lower soluble ALP activity. While AMF colonization was reduced by increasing HCO3 ? concentration, colonization still occurred at high HCO3 ? concentration. At 2.5 mM HCO3 ?, AMF plant growth was comparable to plants at 0 mM HCO3 ?, further indicating the beneficial effect of AMF for alleviation of HCO3 ? plant stress. 相似文献
18.
《Archives of Agronomy and Soil Science》2012,58(1):33-45
ABSTRACTUnderstanding the potential of clinoptilolite (CLI) for adsorption of NH4+ and K+, providing appropriate fertilizer formula, and evaluation of the produced zeolitic nutrient sources (ZNSs) to meet the plant need are the main objectives of this study. Three ZNSs (NH4+-saturated, K+-saturated and dual-purpose NH4+-K+ saturated CLI) were produced, assessed, and compared with commercial N and K fertilizers (CFs) on corn growth in a greenhouse. The results indicated that CLI can potentially adsorb both NH4+ and K+ to the maximum values of 25.00 mg-NH4+ g?1 and 47.61 mg-K g?1, respectively, and chemisorptions mainly followed the process of adsorption. Saturation of zeolite by NH4+ and K+ occurred after 10 and 15 d which lead to ZNSs with 2% and 5% of N and K, respectively. NH4+-K+ saturated CLI contained 1% N and 1% K. The greenhouse experiment showed no significant difference between ZNSs and CFs on plant growth. However, the application of both N and K in the form of zeolitic sources significantly increased the uptake of N by the plant. The highest uptake of K (2.05 g pot?1) occurred in plants supplied with both natural zeolite and CFs. The present results may benefit the future utilization of ZNSs in environmental friendly farming practices. 相似文献
19.
四种常规方法提取伊利石有效钾的机制比较 总被引：1，自引：0，他引：1
采用化学分析、X射线衍射、中红外光声光谱以及原子力显微镜的方法,比较了0.2 mol L~(-1)四苯硼钠法、1 mol L~(-1)沸硝酸法、2 mol L~(-1)冷硝酸法和2 mol L~(-1)热盐酸法浸提伊利石中有效钾的机制。结果表明,四苯硼钠法浸提时,伊利石中钾素释放量达到全钾量的59.5%,且基本均通过层间交换反应予以释放,结构离子铁、铝和硅释放量极低;采用三种酸溶液浸提时,其钾素释放量仅占全钾量的1.53%~2.46%,通过层间交换反应释放的钾量占释放量的比例为88.4%~94.0%。四苯硼钠浸提时伊利石层间距扩大,产生次生过渡矿物,并形成富硅表层,但在伊利石表面无溶蚀特征;三种酸溶液浸提时伊利石结构无改变,但其结晶度降低,且表面有明显的溶蚀特征。因此,土壤矿物层间钾是作物可利用有效钾的主要来源,三种酸溶液浸提方法一方面低估了有效钾容量,另一方面提取了一部分不能为植物所利用的结构态钾,不适宜于用来评价伊利石及土壤有效钾库容量。 相似文献