Vibrational circular-dichroism spectroscopy of homologous cyclic peptides designed to fold into β helices of opposite chirality     

Kulp JL  Owrutsky JC  Petrovykh DY  Fears KP  Lombardi R  Nafie LA  Clark TD 《Biointerphases》2011,6(1):1-7

Cyclic β-helical peptides have been developed as model structured biomolecules for examining peptide adsorption and conformation on surfaces. As a key prerequisite to circular-dichroism (CD) analysis of these model peptides on surfaces, their conformations and the corresponding vibrational spectra in the 1400-1800 cm?1 range were analyzed by vibrational circular-dichroism (VCD) spectroscopy in solution. The two model peptides ("β Leu and β Val") were examined in chloroform, where they each fold into a homogeneous well-defined antiparallel double-stranded β-helical species, as determined previously by NMR and electronic CD spectroscopy. Because the β-helical conformations of β Leu and β Val are well characterized, the VCD spectra of these peptides can be unambiguously correlated with their structures. In addition, these two β-helical peptides differ from one another in two key respects that make them uniquely advantageous for CD analysis--first, while their backbone conformations are topologically similar, β Leu and β Val form helices of opposite chiralities; second, the two peptides differ in their sequences, i.e., composition of the side chains attached to the backbone. The observed VCD spectra for β Leu and β Val are roughly mirror images of each other, indicating that the VCD features are dominated by the chirality and conformation of the peptide backbone rather than by the peptide sequence. Accordingly, spectra similarly characteristic of peptide secondary structure can be expected for peptides designed to be structural analogs of β Leu and β Val while incorporating a variety of side chains for studies of surface adsorption from organic and aqueous solvents.  相似文献   

Field validation of chlordecone soil sequestration by organic matter addition     

Florence Clostre  Thierry Woignier  Luc Rangon  Paula Fernandes  Alain Soler  Magalie Lesueur-Jannoyer 《Journal of Soils and Sediments》2014,14(1):23-33

Purpose

The use of chlordecone (CLD) has caused pollution of soils, which are now a source of contamination for crops and ecosystems. Because of its long-term impacts on human health, exposure to CLD is a public health concern and contamination of crops by CLD must be limited. To this end, we conducted field trials on chlordecone sequestration in soil with added compost.

Materials and methods

The impact of added compost on chlordecone sequestration was measured in nitisols. After characterization of the soil, the transfer of chlordecone from soil to water was assessed in a leaching experiment and from soil to two crop plants in a nitisol plot. Finally, to understand the underlying processes, changes in CLD content were measured in soil fractions and soil porous properties were assessed after the addition of compost.

Results and discussion

A rapid seven-fold decrease in water extractable CLD was observed in amended soils. Five percent amendment led to a significant reduction in the contamination of crops by CLD; edible radish tubers were 50% more contaminated without added compost and cucumber fruits were 60% more contaminated. After the addition of compost, CLD content increased in the fraction of pre-humified or partially mineralized organic debris. Finally, in contrast to andosols, adding compost to nitisols did not affect the soil microstructure.

Conclusions

Increasing chlordecone sequestration by adding compost could be an alternative solution until soil decontamination techniques become available. This could be a provisional way to control further release of CLD from contaminated soils towards other environmental compartments.  相似文献   

Response of Thawed Epidi dymal Red Deer Spermatozoa to Increasing Concentrations of Hydrogen Peroxide,and Importance of Individual Male Variability     

AE Domínguez‐Rebolledo  F Martínez‐Pastor  AF Bisbal  JL Ros‐Santaella  O García‐Álvarez  A Maroto‐Morales  AJ Soler  JJ Garde  MR Fernández‐Santos 《Reproduction in domestic animals》2011,46(3):393-403

Oxidative stress represents a challenge during sperm manipulation. We have tested the effect of increasing hydrogen peroxide (H₂O₂) levels on red deer spermatozoa after cryopreservation, and the role of male‐to‐male variation in that response. In a first experiment, eight thawed samples were submitted to 0, 25, 50, 100 and 200 μm H₂O₂ for 2 h at 37°C. Intracellular reactive oxygen species (H₂DCFDA‐CM) increased with H₂O₂ concentration, but we only detected a decrease in sperm function (motility by CASA and chromatin damage by sperm chromatin structure assay) with 200 μm . Lipoperoxidation assessed by the thiobarbituric acid reactive substance (TBARS) method increased slightly with 50 μm H₂O₂ and above. In a second experiment, samples from seven males were submitted to 0 and 200 μm H₂O₂ for 2 h, triplicating the experiment within each male. Males differed at thawing and regarding their response to incubation and H₂O₂ presence. We found that the kinematic parameters reflected male‐to‐male variability, whereas the response of the different males was similar for lipid peroxidation and viability. A multiparametric analysis showed that males grouped differently if samples were assessed after thawing, after incubation without H₂O₂ or after incubation with H₂O₂. Red deer spermatozoa are relatively resilient to H₂O₂ after thawing, but it seems to be a great male‐to‐male variability regarding the response to oxidative stress. The acknowledgement of this individual variability might improve the development of optimized sperm work protocols.  相似文献   

Phenolic composition of the edible parts (flesh and skin) of Bordô grape (Vitis labrusca) using HPLC-DAD-ESI-MS/MS     

Lago-Vanzela ES  Da-Silva R  Gomes E  García-Romero E  Hermosín-Gutiérrez I 《Journal of agricultural and food chemistry》2011,59(24):13136-13146

The aim of this study was the detailed characterization of the phenolic composition and the determination of the antioxidant activity of the Bord? grape (Vitis labrusca) cultivated in South Brazil. The edible parts of Bord? grapes (flesh and skin) contained 1130 mg/kg of total phenolic compounds (as gallic acid), mainly located in the skins. Anthocyanin content in the skins was high, largely as 3,5-diglucosides (1359 mg/kg, as malvidin 3,5-diglucoside). Total flavonols accounted for 154 μmol/kg, mainly located in the skins and with myricetin 3-glucoside as the principal flavonol in both grape parts. Very low amounts of flavan-3-ol monomers and dimers and low amounts of polymeric proanthocyanidins, with a composition similar to that reported for V. vinifera grape varieties, were found in Bord? grape skins. Hydroxycinnamic acid derivatives mainly derived from caffeic acid and were found in the skins in high amounts, ten times higher than in the flesh (total amount: 483 μmol/kg). Finally, the Bord? grape cultivar can be considered a high resveratrol producer (10.91 mg/kg) and also exhibited a high value of total antioxidant capacity (37.6 ± 1.0 mmol/kg, as Trolox).  相似文献   

What is your diagnosis? Testicular torsion     

Boza S  de Membiela F  Navarro A  Escobar MT  Soler M  Agut A 《Journal of the American Veterinary Medical Association》2011,238(1):37-38

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Biopsy wound healing in long-finned pilot whales (Globicephala melas)     

Giménez J  De Stephanis R  Gauffier P  Esteban R  Verborgh P 《The Veterinary record》2011,168(4):101b

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Impact of acute conjunctivitis on ocular surface homeostasis in dogs     

Lionel Sebbag  Elizabeth A. Soler  Rachel A. Allbaugh  Jonathan P. Mochel 《Veterinary ophthalmology》2020,23(5):828-833

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Soil erosion modelling of burned and mulched soils following a Mediterranean forest wildfire     

Javier Gonzalez-Romero  Demetrio Antonio Zema  Bruno Gianmarco Carrà  Jonay Neris  Alvaro Fajardo  Pedro Antonio Plaza-Álvarez  Daniel Moya  Esther Peña-Molina  Jorge de las Heras  Manuel Esteban Lucas-Borja 《Soil Use and Management》2023,39(2):881-899

Soil erosion modelling applied to burned forests in different global regions can be unreliable because of a lack of verification data. Here, we evaluated the following three erosion models: (1) Water Erosion Prediction Project (WEPP), (2) Morgan-Morgan-Finney (MMF) and (3) Universal Soil Loss Equation-Modified (USLE-M). Using field plots that were either untreated or mulched with straw, this study involved observations of soil loss at the event scale at a burned pine forest in Central Eastern Spain. The erosion predictions of the three models were analysed for goodness-of-fit. Optimization of the MMF model with a new procedure to estimate the C-factor resulted in a satisfactory erosion prediction capacity in burned plots with or without the mulching treatment. The WEPP model underestimated erosion in the unburned areas and largely overestimated the soil loss in burned areas. The accuracy of soil loss estimation by the USLE-M model was also poor. Calibration of the curve numbers and C-factors did not improve the USLE-M model estimation. Therefore, we conclude that an optimized MMF model was the most accurate way to estimate soil loss and recommend this approach for in Mediterranean burned forests with or without postfire mulching. This study gives land managers insight about the choice of the most suitable model for erosion predictions in burned forests.  相似文献   

DETERMINATION OF FOLIAR SAMPLING CONDITIONS AND STANDARD LEAF NUTRIENT LEVELS TO ASSESS MINERAL STATUS OF LOQUAT TREE     

Ana Quiñones  Esteban Soler  Francisco Legaz 《Journal of plant nutrition》2013,36(2):284-298

Loquat [Eriobotrya japonica (Thunb.) Lindl.] is a minor fruit-tree species which is grown commercially in the Mediterranean region. Given the current increase in loquat cultivation, there is a need to define basic crop-management procedures in order to obtain high yields and optimal fruit quality. The aim of this work was to develop a routine for loquat farmers to follow, in order to know the nutritional status of trees in order to establish a rational fertilization regime, and to correct nutrient deficiencies as soon as possible. This paper reports three experiments aimed at establishing: 1) leaf type, 2) time of leaf sampling and 3) the standard leaf nutrient levels as a function of maximum yield. Results indicate that the summer flush leaves could be the most representative of nutritional status. Thus, the most appropriate time to sample leaves for analysis is in summer (beginning of August to the end of September), taking mature 3–4 month old leaves.  相似文献   

Diverse phytoplasmas associated with maize bushy stunt disease in Peru     

Gamarra  Delia Gamarra  Villar  Charo Milagros  Suarez  Gilberto Torres  Esteban  Walter Darlyn Ingaruca  Contaldo  Nicoletta  Lozano  Emerson Clovis Carrasco  Bertaccini  Assunta 《European journal of plant pathology / European Foundation for Plant Pathology》2022,163(1):223-235

European Journal of Plant Pathology - Corn plants showing symptoms of midribs chlorosis, and leaf reddening, short internodes, ear proliferation, and plant growth reduction were collected in Peru...  相似文献