Regional variability in landscape effects on forest bird communities     

Spake  Rebecca  Soga  Masashi  Kawamura  Kazuhiro  Cooke  Robert S.  Yamaura  Yuichi  Eigenbrod  Felix 《Landscape Ecology》2020,35(5):1055-1071

Landscape Ecology - Functional responses to landscape heterogeneity are context-dependent, hampering the transferability of landscape-scale conservation initiatives. Japan provides a unique...  相似文献   

Cherry picking by pseudomonads: After a century of research on canker,genomics provides insights into the evolution of pathogenicity towards stone fruits     

Michelle T. Hulin  Robert W. Jackson  Richard J. Harrison  John W. Mansfield 《Plant pathology》2020,69(6):962-978

Bacterial canker disease is a major limiting factor in the growing of cherry and other Prunus species worldwide. At least five distinct clades within the bacterial species complex Pseudomonas syringae are known to be causal agents of the disease. The different pathogens commonly coexist in the field. Reducing canker is a challenging prospect as the efficacy of chemical controls and host resistance may vary against each of the diverse clades involved. Genomic analysis has revealed that the pathogens use a variable repertoire of virulence factors to cause the disease. Significantly, strains of P. syringae pv. syringae possess more genes for toxin biosynthesis and fewer encoding type III effector proteins. There is also a shared pool of key effector genes present on mobile elements such as plasmids and prophages that may have roles in virulence. By contrast, there is evidence that absence or truncation of certain effector genes, such as hopAB, is characteristic of cherry pathogens. Here we highlight how recent research, underpinned by the earlier epidemiological studies, is allowing significant progress in our understanding of the canker pathogens. This fundamental knowledge, combined with emerging insights into host genetics, provides the groundwork for development of precise control measures and informed approaches to breed for disease resistance.  相似文献   

Aerobic microbial respiration in 86-million-year-old deep-sea red clay     

Røy H  Kallmeyer J  Adhikari RR  Pockalny R  Jørgensen BB  D'Hondt S 《Science (New York, N.Y.)》2012,336(6083):922-925

Microbial communities can subsist at depth in marine sediments without fresh supply of organic matter for millions of years. At threshold sedimentation rates of 1 millimeter per 1000 years, the low rates of microbial community metabolism in the North Pacific Gyre allow sediments to remain oxygenated tens of meters below the sea floor. We found that the oxygen respiration rates dropped from 10 micromoles of O(2) liter(-1) year(-1) near the sediment-water interface to 0.001 micromoles of O(2) liter(-1) year(-1) at 30-meter depth within 86 million-year-old sediment. The cell-specific respiration rate decreased with depth but stabilized at around 10(-3) femtomoles of O(2) cell(-1) day(-1) 10 meters below the seafloor. This result indicated that the community size is controlled by the rate of carbon oxidation and thereby by the low available energy flux.  相似文献   

Whitened kernel surface: A fast and reliable method for assessing Fusarium severity on cereal grains by digital picture analysis     

Marine Ollier  Vincent Talle  Anne‐Laure Brisset  Zo Le Bihan  Simon Duerr  Marc Lemmens  Ellen Goudemand  Olivier Robert  Jean‐Louis Hilbert  Hermann Buerstmayr 《Plant Breeding》2019,138(1):69-81

Fusarium head blight (FHB) is a cereal disease of major importance responsible for yield losses and mycotoxin contaminations in grains. Here, we introduce a new measurement approach to quantify FHB severity on grains based on the evaluation of the whitened kernel surface (WKS) using digital image analysis. The applicability of WKS was assessed on two bread wheat and one triticale grain sample sets (265 samples). Pearson correlation coefficients between Fusarium‐damaged kernels (FDK) and WKS range from r = 0.77 to r = 0.81 and from r = 0.61 to r = 0.86 for the correlation between deoxynivalenol (DON) content and WKS. This new scoring method facilitates fast and reliable assessment of the resistance to kernel infection and shows significant correlation with mycotoxin content. WKS can be automated and does not suffer from the “human factor” inherent to visual scorings. As a low‐cost and fast approach, this method appears particularly attractive for breeding and genetic analysis of FHB resistance where typically large numbers of experimental lines need to be evaluated, and for which WKS is suggested as an alternative to visual FDK scorings.  相似文献   

Wheat grain quality under increasing atmospheric CO₂ concentrations in a semi-arid cropping system     

Nimesha Fernando  Joe Panozzo  Michael Tausz  Robert M. Norton  Glenn J. Fitzgerald  Samuel Myers  Cassandra Walker  James Stangoulis  Saman Seneweera 《Journal of Cereal Science》2012

We investigated wheat (Triticum aestivum) grain quality under Free Air CO₂ Enrichment (FACE) of 550 ± 10% CO₂ μmol mol⁻¹. In each of two full growing seasons (2008 and 2009), two times of sowing were compared, with late sowing designed to mimic high temperature during grain filling. Grain samples were subjected to a range of physical, nutritional and rheological quality assessments. Elevated CO₂ increased thousand grain weight (8%) and grain diameter (5%). Flour protein concentration was reduced by 11% at e[CO₂], with the highest reduction being observed at the late time of sowing in 2009, (15%). Most of the grain mineral concentrations decreased under e[CO₂] - Ca (11%), Mg (7%), P (11%) and S (7%), Fe (10%), Zn (17%), Na (19%), while total uptake of these nutrients per unit ground area increased. Rheological properties of the flour were altered by e[CO₂] and bread volume reduced by 7%. Phytate concentration in grains tended to decrease (17%) at e[CO₂] while grain fructan concentration remained unchanged. The data suggest that rising atmospheric [CO₂] will reduce the nutritional and rheological quality of wheat grain, but at high temperature, e[CO₂] effects may be moderated. Reduced phytate concentrations at e[CO₂] may improve bioavailability of Fe and Zn in wheat grain.  相似文献   

Changes in selected stress and immune‐related genes in Atlantic cod,Gadus morhua,following overcrowding     

Christopher Marlowe A Caipang  Monica F Brinchmann  Ingvild Berg  Martin Iversen  Robert Eliassen  Viswanath Kiron 《Aquaculture Research》2008,39(14):1533-1540

Using Atlantic cod, Gadus morhua, as a model for the stress response in gadoid fish, the changes in the expression of some stress and immune genes as well as the profiles of plasma cortisol were examined. Adult fish were kept at a density of ca. 100 kg m^?3 by lowering the water level in the rearing tank for 1 h and this short‐term crowding stress was repeated thrice over a 12‐h interval period. Blood samples were collected before exposure and at 2, 24 and 72 h post crowding. Plasma cortisol level significantly increased at 2 h post crowding but returned to pre‐crowding levels 24 h after exposure. The relative expression of the stress response genes, glucose transporter‐3 and a putative heat shock protein 70 significantly increased at 2 and 24 h post crowding respectively. Significant up‐regulation of the pro‐inflammatory cytokines, interleukin (IL)‐1β and IL‐8, as well as anti‐bacterial genes, g‐type lysozyme and bactericidal permeability‐increasing protein/lipopolysaccharide‐binding protein (BPI/LBP) was also observed at 2 h and the levels were maintained until 72 h post exposure, except for BPI/LBP which had maximum up‐regulation at 24 h. The present observations have implications with respect to fish welfare and assessment of the health status of the farmed fish.  相似文献   

Distribution of lipid droplets is an indicator for egg quality in brown trout, Salmo trutta fario     

Nabil Mansour  Robert A. Patzner 《Aquaculture (Amsterdam, Netherlands)》2007,273(4):744-747

In the eggs of the brown trout, Salmo trutta fario, lipid droplets are clearly visible beneath the oolemma on the surface of the protein yolk. When examining the distribution of lipid vesicles in egg batches of different quality, four categories of lipid vesicle distribution could be distinguished: In the first category, the lipid droplets were evenly distributed throughout the egg. These egg batches had a high quality (percentage of eggs developing to eyed stage embryos: 96.2 ± 5.2). Some lipid droplets had the tendency to coalesce in one pole of the egg in the second category. This coalescing of lipid droplets was accompanied with a reduction in egg quality to about 50% of the first category (% of eyed stage embryos: 40.6 ± 15.2). In the last two categories, the lipid droplets were mostly coalesced in one or two poles of the egg and the egg quality was very low (% of eyed stage embryos: 3.3 ± 2.9 and zero, respectively). In conclusion, examination of lipid droplets distribution, in brown trout, can distinguish between high and low quality eggs in an easy and reliable way.  相似文献   

Fine-scale vegetation patches decline in size and cover with increasing rainfall in Australian savannas   总被引：5，自引：0，他引：5  

Ludwig  John A.  Tongway  David J.  Eager  Robert W.  Williams  Richard J.  Cook  Garry D. 《Landscape Ecology》1999,14(6):557-566

Fine-scale vegetation patches (<5 m in width) are critically important in many landscapes because they function to obstruct surface flows of water and wind. These obstructions increase the infiltration of runoff and the capture of nutrients in runoff sediments and in wind-blown soil and litter. The importance of redistribution of runoff into runon patches from spaces between patches (fetches) is likely to be greater in drier than in wetter environments. In this paper we examine the hypothesis that the ratio of fetch to patch decreases as rainfall increases, and that this trend will be most evident on intermediate-textured soils because these soils are more prone to runoff. We measured fine-scale patches on 38 sites with sand, loam or clay soils. Sites were located along a 1000-mm rainfall gradient in the savannas of northern Australia. The width and intercept length of patches and the fetch between patches was measuring along line transects of 100–120 m oriented down slope. We found that the ratio of fetch to patch area did not decrease with decreasing rainfall, but increased on both sand and loam soils. This result was because with increasing rainfall mean spacing between patches disproportionally increased while mean patch size and cover declined. The cover of patches was negatively correlated with tree canopy cover, which significantly increased with rainfall. This negative correlation suggests that in higher rainfall savannas the size and spacing of ground-layer patches is controlled by the tree layer, and that as rainfall decreases this control decreases and runoff-runon processes increasingly structure the landscape. For savannas on clay soils these trends were not significant except that on the highest rainfall sites the cover of ground-layer patches was nearly 100% while trees were absent.  相似文献   

Soil saturation effects on forest dynamics: scaling across a southern boreal/northern hardwood landscape   总被引：1，自引：0，他引：1  

Weishampel  John F.  Knox  Robert G.  Levine  Elissa R. 《Landscape Ecology》1999,14(2):121-135

Patch modeling can be used to scale-up processes to portray landscape-level dynamics. Via direct extrapolation, a heterogeneous landscape is divided into its constituent patches; dynamics are simulated on each representative patch and are weighted and aggregated to formulate the higher level response. Further extrapolation may be attained by coarsening the resolution of or lumping environmental data (e.g., climatic, edaphic, hydrologic, topographic) used to delimit a patch.Forest patterns at the southern boreal/northern hardwood transition zone are often defined by soil heterogeneity, determined primarily by the extent and duration of soil saturation. To determine how landscape-level dynamics predicted from direct extrapolation compare when coarsening soil parameters, we simulated forest dynamics for soil series representing a range of drainage classes from east- central Maine. Responses were aggregated according to the distribution of soil associations comprising a 600 ha area based on local- (1:12,000), county- (1:120,000) and state- (1:250,000) scale soil maps. At the patch level, simulated aboveground biomass accumulated more slowly in poorer draining soils. Different soil series yielded different communities comprised of species with various tolerances for soil saturation. When aggregated, removal of waterlogging caused a 20–60% increase in biomass accumulation during the first 50 years of simulation. However, this early successional increase and the maximum level of biomass accumulation over a 200 year period varied by as much as 40% depending on the geospatial data. This marked discrepancy suggests caution when extrapolating with forest patch models by coarsening parameters and demonstrates how rules used to rescale environmental data need to be evaluated for consistency.  相似文献   

Sectional notes     

A. G. Tolaas  E. L. Newdick  R. A. Jehle  Ralph W. Donaldson  Robert Schmidt  H. O. Werner  J. R. Liv-Ermore  William H. Martin  J. B. R. Dickey  Harold L. Bailey  E. B. Tussing  G. S. Ralston  Chas D. Gaines  John Tucker 《American Journal of Potato Research》1934,11(10):276-287

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