Single step genomic evaluation for female fertility in Nordic Red dairy cattle          下载免费PDF全文

Kaarina Matilainen  Ismo Strandén  Gert Pedersen Aamand  Esa A. Mäntysaari 《Zeitschrift für Tierzüchtung und Züchtungsbiologie》2018,135(5):337-348

Joint Nordic (Denmark, Finland, Sweden) genetic evaluation of female fertility is currently based on the multiple trait multilactation animal model (BLUP). Here, single step genomic model (ssGBLUP) was applied for the Nordic Red dairy cattle fertility evaluation. The 11 traits comprised of nonreturn rate and days from first to last insemination in heifers and first three parities, and days from calving to first insemination in the first three parities. Traits had low heritabilities (0.015–0.04), but moderately high genetic correlations between the parities (0.60–0.88). Phenotypic data included 4,226,715 animals with records and pedigree 5,445,392 animals. Unknown parents were assigned into 332 phantom parent groups (PPG). In mixed model equations animals were associated with PPG effects through the pedigree or both the pedigree and genomic information. Genotype information of 46,914 SNPs was available for 33,969 animals in the pedigree. When PPG used pedigree information only, BLUP converged after 2,420 iterations whereas the ssGBLUP evaluation needed over ten thousand iterations. When the PPG effects were solved accounting both the pedigree and the genomic information, the ssGBLUP model converged after 2,406 iterations. Also, with the latter model breeding values by ssGBLUP and BLUP became more consistent and genetic trends followed each other well. Models were validated using forward prediction of the young bulls. Reliabilities and variance inflation of predicted genomic breeding values (values for parent averages in brackets) for the 11 traits ranged 0.22–0.31 (0.10–0.27) and 0.81–0.95 (0.83–1.06), respectively. The ssGBLUP model gave always higher validation reliabilities than BLUP, but largest increases were for the cow fertility traits.  相似文献   

喀斯特山区2个鲫鱼群体基于转铁蛋白的遗传多样性研究     

周其椿  安苗  王金娜  郭健康  杨兴  李建光 《河南农业科学》2016,(12):143-148

为了解喀斯特山区2个不同鲫鱼群体在蛋白质水平的遗传多样性及其遗传差异,运用聚丙烯酰胺凝胶电泳方法对喀斯特山区2个群体鲫鱼的血清转铁蛋白电泳表型及多样性进行研究。结果表明:群体克隆多样性指数表现为草海鲫鱼(0.32)﹥红鲫(0.25,对照)﹥普安鲫鱼(0.13);3个鲫鱼群体的13个克隆由9个不同的等位基因产生,等位基因的频率分别为Tf~a0.144 9、Tf~b0.202 9、Tf~c0.036 2、Tf~d0.058 0、Tf~e0.007 2、Tf~f0.239 1、Tf~g0.014 5、Tf~h0.275 4、Tf~i0.029 0;普安鲫鱼与草海鲫鱼和红鲫无共享的基因型;普安鲫鱼与草海鲫鱼之间的遗传相似性指数较高(0.714 3),遗传距离较小(0.285 7)。总体来看,草海鲫鱼的克隆多样性水平较高,其转铁蛋白多样性程度较普安鲫鱼丰富;2个群体之间存在较近的亲缘关系,未达到遗传距离种的分化标准。  相似文献   

农村中小学现代远程教育资源利用的问题与策略     

杨宇  时亚东  魏强强 《计算机与农业》2011,(1):125-126

随着农村中小学现代远程教育工程的逐步实施和深入，农村中小学在利用农村远程教育资源（以下简称农远资源）的过程中也暴露出越来越多的问题。针对农远资源在农村中小学教育中利用率低的问题，在做了相关调查的基础上，分析了农村中小学农远资源利用中存在的弊端，为提高农远资源的利用率提出了相关的解决策略。  相似文献   

"早稻-冬草莓"轮作模式最佳种植期研究     

王芬  蔡霞 《安徽农业科学》2015,(35)

[目的]研究"早稻-冬草莓"轮作模式最佳种植期.[方法]根据双流县气象局1971 ～ 2010年气象资料,采用滑移气候相似距及数理统计方法,对"早稻-冬草莓"轮作模式最佳种植期进行分析.[结果]冬草莓最佳种植期在8月1日～翌年3月31日,其小苗移栽最早在7月中旬,最晚在8月中旬,最佳移栽时期平均在8月19日.早稻移栽时间平均为3月26日,拟收获期平均为7月26日.[结论]从气象角度研究了"早稻-冬草莓"轮作模式最佳种植期,为双流县推广该模式,最大限度地发挥光、温、水、土地的生态效益提供了科学的决策依据.  相似文献   

人工合成小麦紫色胚芽鞘的遗传定位分析     

耿小红  武艳芍  余马 《贵州农业科学》2016,(7):11-13

为探明小麦花青素色素沉积的关键位点,以167份重组自交系群体为材料,利用已构建的高密度遗传图谱对来源于硬粒小麦(AABB)和节节麦亚种tauschii(DD)杂交后所得的人工合成小麦SHW-L1中控制紫色胚芽鞘的基因进行遗传定位。同时利用目标性状关联遗传区段对SHW-L1及其亲本进行基因型鉴定。结果表明:目标性状在重组自交系群体中表现为单基因遗传,且被定位于7D染色体,其关联遗传区段在异源六倍化过程中有遗传位点缺失。  相似文献   

不同来源花生品种的ISSR分析及亲缘关系研究   总被引：1，自引：0，他引：1  

王天菊  白德胜  何龙飞  李创珍  韦善清 《花生学报》2011,40(2):7-12

利用13对ISSR引物对28个栽培种花生品种进行PCR扩增,研究这些品种的DNA多态性及其亲缘关系。结果表明,有7对引物检测到明显的多态性,从28个花生品种中扩增出90条带,其中多态性带达到79条,多态性比率为87.8%,平均每个引物可扩增出12.86条带,11.29条为多态性条带。品种间的遗传相似系数值在0.411~0.800之间,平均为0.620。在UPGMA聚类分析简单匹配系数值为0.57处,可把28个花生品种分成3个品种群。由此表明,这些不同来源的花生品种具有较高的DNA多态性,亲缘关系不同。  相似文献   

农村党员干部现代远程教育视频资源管理方法的创新研究     

戴丽娜  郑博薇 《安徽农业科学》2011,39(28):17586-17587

阐述了＂ABC分析法＂和＂长尾理论＂,并将2种方法结合用于农村党员干部现代远程教育视频资源的管理。研究表明,这2种方法的结合使用可以有效实现管理效益。洞察开发视频资源在实际制作中存在的问题,及视频资源在网络教学中面临的实际情况,结合应用＂ABC分析法＂和＂长尾理论＂,提出了突破这一新课题的管理方法。  相似文献   

结球甘蓝抽薹性遗传规律和QTL定位分析     

王五宏  汪精磊  李必元  魏庆镇  胡天华  胡海娇  包崇来 《园艺学报》2020,47(5):974-982

以早抽薹‘S-1’与晚抽薹‘G-1’为亲本，构建F1、BC1、BC2和F2群体，采用植物数量性状主基因 + 多基因混合遗传模型分析法对结球甘蓝抽薹性状进行遗传分析，并采用SLAF-BSA方法对抽薹时间进行QTL定位分析。结果显示，结球甘蓝抽薹性状是由2对加性—显性—上位性主基因 + 加性—显性多基因遗传控制；主基因 + 多基因平均遗传率是93.41%。共检测到2个QTL，分别为2号染色体上的2.31 ~ 3.09 Mb和33.57 ~ 34.40 Mb，总长度为1.61 Mb。  相似文献   

Relationship of Icelandic cattle with Northern and Western European cattle breeds,admixture and population structure     

Egill Gautason  Anna A. Schönherz  Goutam Sahana  Bernt Guldbrandtsen 《Acta Agriculturae Scandinavica, Section A - Animal Sciences》2020,69(1-2):25-38

ABSTRACT

Icelandic cattle is believed to have been brought from Norway during the settlement of Iceland around AD 870-930. Previous research on genetic relationships has indicated that Icelandic cattle is most related to northern Nordic indigenous breeds. Using single nucleotide polymorphism genotype data from Icelandic cattle and 29 Northern and Western European cattle breeds, we studied relationships and admixture among these breeds, and assessed population structure in Icelandic cattle. Population structure analysis through principal component analysis, estimation of ancestry, and analysis of patterns of population splitting and mixing revealed that Icelandic cattle are most related to three Finncattle breeds (Eastern, Northern and Western Finncattle), and Swedish Mountain cattle. Icelandic cattle has very low levels of admixture. We observed very limited population structure in Icelandic cattle. The observed structure was due to variable sire contributions. Over 1000 years of almost complete isolation has made Icelandic cattle highly genetically distinct from other cattle breeds.  相似文献   

Genetic Diversity of Fruit Phenotypic Traits of Wild Pyrus ussuriensis Maxim     

AN Meng-Meng  WANG Yan-Ting  SONG Yang  JI Xiao-Hao  LIU Chang  WANG Nan  WU Yu-Sen  LIU Wen  CAO Yu-Fen  FENG Shou-Qian  CHEN Xue-Sen 《中国农业科学》2014,47(15):3034-3043

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