Association mapping reveals loci associated with multiple traits that affect grain yield and adaptation in soft winter wheat     

Dennis N. Lozada  R. Esten Mason  Md Ali Babar  Brett F. Carver  Gina-Brown Guedira  Keith Merrill  Maria Nelly Arguello  Andrea Acuna  Lucas Vieira  Amanda Holder  Christopher Addison  David E. Moon  Randal G. Miller  Susanne Dreisigacker 《Euphytica》2017,213(9):222

Genome-wide association studies (GWAS) are useful to facilitate crop improvement via enhanced knowledge of marker-trait associations (MTA). A GWAS for grain yield (GY), yield components, and agronomic traits was conducted using a diverse panel of 239 soft red winter wheat (Triticum aestivum) genotypes evaluated across two growing seasons and eight site-years. Analysis of variance showed significant environment, genotype, and genotype-by-environment effects for GY and yield components. Narrow sense heritability of GY (h ²  = 0.48) was moderate compared to other traits including plant height (h ²  = 0.81) and kernel weight (h ²  = 0.77). There were 112 significant MTA (p < 0.0005) detected for eight measured traits using compressed mixed linear models and 5715 single nucleotide polymorphism markers. MTA for GY and agronomic traits coincided with previously reported QTL for winter and spring wheat. Highly significant MTA for GY showed an overall negative allelic effect for the minor allele, indicating selection against these alleles by breeders. Markers associated with multiple traits observed on chromosomes 1A, 2D, 3B, and 4B with positive minor effects serve as potential targets for marker assisted breeding to select for improvement of GY and related traits. Following marker validation, these multi-trait loci have the potential to be utilized for MAS to improve GY and adaptation of soft red winter wheat.  相似文献   

Performance of Bangladesh indigenous rice in a weed infested field and separation of allelopathy from resource competition     

Sheikh Muhammad Masum  Mohammad Amzad Hossain  Hikaru Akamine  Jun‐Ichi Sakagami  Takahiro Ishii  Ichiro Nakamura  Md. Asaduzzaman  Prasanta Chitta Bhowmik 《Weed Biology and Management》2019,19(2):39-50

This study aimed to identify the potential allelopathic indigenous rice (Oryza sativa L. ssp. indica) varieties from Bangladesh using a performance study in a weed‐infested field and to assess the extent of allelopathic interference relative to resource competition in a glasshouse experiment. Six varieties – namely, “Boterswar,” “Goria,” “Biron” and “Kartiksail” as the most allelopathic, “Hashikolmi” as weakly allelopathic and “Holoi” as nonallelopathic – were raised following a nonweed control method. The infestation levels of weed species were calculated using Simpson's Diversity Index (SDI), which ranged from 0.2 to 0.56. However, a significant correlation coefficient (0.87, P < 0.001) was obtained from these field data compared with the root inhibition percentage from the laboratory bioassay, and the “Boterswar” variety was the most allelopathic. The interactions between the allelopathic variety “Boterswar,” weakly allelopathic variety “Hashikolmi” and Echinochloa oryzicola via a target (rice)‐adjacent (E. oryzicola) cogrowth culture were determined in a hydroponic arrangement. The relative competitive intensity (RCI) and the relative neighbor effect (RNE) values showed that the crop–weed interaction was facilitation for “Boterswar” and competition for “Hashikolmi” and E. oryzicola in rice/E. oryzicola cogrowth cultures. The allelopathic effects of “Boterswar” were much higher than the resource competition in rice/E. oryzicola cogrowth cultures. The converse was observed for “Hashikolmi.” Moreover, the mineral content of E. oryzicola was severely affected by “Boterswar”/E. oryzicola cogrowth cultures’ exudate solution. Therefore, the allelopathic potential of “Boterswar” variety might be useful for developing the weed‐suppressing capacity of rice, which will likely have a significant influence on paddy weed control.  相似文献   

Nutritional significance of amino acids,vitamins and minerals as nutraceuticals in poultry production and health – a comprehensive review     

Mahmoud Alagawany  Shaaban S. Elnesr  Mayada R. Farag  Ruchi Tiwari  Mohd. Iqbal Yatoo  Kumaragurubaran Karthik  Izabela Michalak  Kuldeep Dhama 《The Veterinary quarterly》2021,41(1):1

Nutraceuticals have gained immense importance in poultry science recently considering the nutritional and beneficial health effects of their constituents. Besides providing nutritional requirements to birds, nutraceuticals have beneficial pharmacological effects, for example, they help in establishing normal physiological health status, prevent diseases and thereby improve production performance. Nutraceuticals include amino acids, vitamins, minerals, enzymes, etc. which are important for preventing oxidative stress, regulating the immune response and maintaining normal physiological, biochemical and homeostatic mechanisms. Nutraceuticals help in supplying nutrients in balanced amounts for supporting the optimal growth performance in modern poultry flocks, and as a dietary supplement can reduce the use of antibiotics. The application of antibiotic growth enhancers in poultry leads to the propagation of antibiotic-resistant microbes and drug residues; therefore, they have been restricted in many countries. Thus, there is a demand for natural feed additives that lead to the same growth enhancement without affecting the health. Nutraceuticals substances have an essential role in the development of the animals’ normal physiological functions and in protecting them against infectious diseases. In this review, the uses of amino acids, vitamins and minerals as well as their mode of action in growth promotion and elevation of immune system are discussed.  相似文献   

Carrier rate of the c.235G>C mutation in the bovine isoleucyl-tRNA synthetase (IARS) gene of Japanese Black cows at Kagoshima prefecture, Japan,and analysis of the metabolic profiling and reproductive performance of heterozygous cows     

Md Shafiqul ISLAM  Urara SHINYA  Mitsuhiro TAKAGI  Takao AKAHOSHI  Akira YABUKI  Shahnaj PERVIN  Tofazzal Md RAKIB  Mohammad Mahbubur RAHMAN  Martia Rani TACHARINA  Osamu YAMATO 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2021,83(2):254

Bovine isoleucyl-tRNA synthetase (IARS) disorder, a major cause of weak calf syndrome, is caused by a homozygous missense (c.235G>C) mutation in the bovine IARS gene of Japanese Black (JB) cattle, which was identified in 2013. However, the extent to which the carrier rate has changed at Kagoshima prefecture, Japan, and whether the carrier status is associated with any clinical or reproductive problems, have yet to be ascertained. In this study, using a real-time polymerase chain reaction-based genotyping assay, we determined the carrier rate in a regional JB cow population at Kagoshima prefecture. Comparative analyses were performed on the metabolic profile test (MPT) results and reproductive performance data obtained for heterozygous carrier and homozygous wild-type cows. In 2009 and 2018, DNA samples were collected from 130 and 462 clinically healthy JB cows, respectively, in Kagoshima prefecture. MPT results and reproductive performance data were evaluated for 62 cows, comprising four heterozygous carriers and 58 wild-type cows. Genotyping revealed that the carrier rate was 6.9% in 2009 and 1.5% in 2018, the difference of which was statistically significant (P<0.005). There were no statistically significant differences between the carrier and wild-type cows with respect to either MPT results or reproductive performance, indicating that the carrier cows have necessary IARS activity to maintain minimal health and reproductive potential.  相似文献   

New technique of sex preselection for increasing female ratio in boar sperm model     

Yoo-Jin Park  Ki-Jin Kwon  Won-Hee Song  Won-Ki Pang  Do-Yeal Ryu  Md Saidur Rahman  Myung-Geol Pang 《Reproduction in domestic animals》2021,56(2):333-341

In this study, we tried to optimize the porcine semen extender conditions to maximize the differences between live X chromosome-bearing (X) spermatozoa and to Y chromosome-bearing (Y) spermatozoa without a decline in the fertility rate at different pH conditions during storage. We observed the viability of X and Y boar spermatozoa in acidic (pH 6.2), original (pH 7.2), and alkaline condition (pH 8.2) for 5 days to investigate the effect of storage conditions on the X to Y spermatozoa ratio. The functional parameters of spermatozoa were also examined to evaluate sperm quality. Sperm motility was preserved at pH 7.2 and pH 6.2 for 3 days, while sperm motility at pH 8.2 decreased significantly after 2 days. Non-capacitated spermatozoa increased while capacitated spermatozoa decreased during storage. Sperm viability decreased significantly duration-dependent under all pH conditions, but there was no significant difference during storage at pH 6.2 and 7.2. The X: Y ratio of live spermatozoa in acidic condition was maximized (1.2:1) without affecting the sperm function and fertility-related protein expression after 2 days compared to original conditions. Moreover, insemination of sows using acidic extender increased the number of female pups on days 1 and 2 of preservation. These results indicate that the production of female offspring may increase when acidic BTS is used for 2 days without affecting the success rate of AI. Above all, this method is simple and economical compared to other methods.  相似文献   

MiPDCD6 effector suppresses host PAMP-triggered immunity to facilitate Meloidogyne incognita parasitism in tomato     

Md Kamaruzzaman  Li-Feng Zhao  Jin-Ai Zhang  Le-Tian Zhu  Yuan Li  Xiao-Da Deng  Shu-Jing Cai  Xiao-Cong Lian  Fang-Ni Chen  Ning Jia  Xinrong Wang 《Plant pathology》2023,72(1):195-206

  相似文献   

A logistic analysis of the factors determining the decision of smallholder farmers to intercrop: A case study involving rubber–tea intercropping in Sri Lanka     

S.M.M. Iqbal  C.R. Ireland  V.H.L. Rodrigo 《Agricultural Systems》2006

The factors influencing the decision of smallholder farmers to adopt new farming technologies were studied with reference to rubber–tea intercropping in Sri Lanka. Rubber–tea intercropping has been recommended previously to rubber farmers as a means to improve productivity and income during the early pre-tapping phase of rubber growth. Although crop trials have shown that the two crops are agronomically compatible and potentially produce a combined economic yield superior to the yield of a sole crop grown on the same area of land, there is little evidence of widespread adoption of this practice among smallholder farmers in Sri Lanka. The aim of the study was to determine the major factors that influence the decision to undertake rubber–tea intercropping and to construct a predictive model that describes the likelihood of adoption of intercropping by traditional smallholder rubber growers. A rapid rural appraisal (RRA) was undertaken based on semi-structured interviews of 90 smallholder farmers in the main rubber growing low wet zone of Sri Lanka. Among a number of factors shown to significantly influence the decision to intercrop tea with rubber, three were shown to operate independently, namely level of income, source of income (i.e. solely from own farm or from farm plus additional off-farm enterprises), and availability of land considered suitable for tea cultivation. A statistical model developed through correlation and logistic analysis, which predicts the likelihood of a smallholder adopting intercropping based on these factors, is presented and discussed. The most likely combination of circumstances (82% probability) under which rubber–tea intercropping is practiced is shown to be where the farmer’s income is greater than Rs. 10,000 per month, where the farmer’s income is based solely on own farm enterprises, and where more than 80% of the farmer’s land area was judged to be suitable for tea cultivation. Conversely, 30% of smallholder farmers that chose not to intercrop did possess land suitable for tea cultivation. Qualitative responses to the RRA indicated that limitation of technical knowledge was the main problem subsequently faced by rubber farmers who had adopted rubber–tea intercropping. Results indicate that there is need for both income support through farm subsidies and further agricultural extension services, if rubber–tea intercropping is to be adopted more widely in Sri Lanka. The wider usefulness of the developed logistic model in determining the likelihood of adoption of intercropping by smallholder farmers is discussed.  相似文献   

Current status and prospects of farming the giant river prawn Macrobrachium rosenbergii (De Man) in Bangladesh     

Md Abdul Wahab  Sk Ahmad‐Al‐Nahid  Nesar Ahmed  Mohammad M Haque  Mahmudul Karim 《Aquaculture Research》2012,43(7):970-983

Giant river prawn (Macrobrachium rosenbergii) farming plays an important role in the economy of Bangladesh. Presently, it is cultured in around 50 000 ha area with total annual production of 23 240 t. Traditional extensive prawn farming has been expanding over the last three decades through the introduction and adoption of improved culture systems, such as culture of prawn‐carps, prawn‐shrimp‐fish and prawn‐fish‐rice as concurrent and rotational systems. Efforts for the development of improved techniques on broodstock management, seed production and rearing and grow‐out of prawn have been made over the last decade. The outcomes are low‐cost feed for broodstock, production of post‐larvae in net cages (hapa), all‐male prawn culture, periphyton based prawn‐tilapia culture, C/N based prawn culture, organic prawn farming, prawn‐mola culture and prawn‐carp‐mola polyculture. Despite the development of culture technologies, a number of challenges for sustainable development of prawn farming need to be overcome to realize the potentials of this promising sector. Good aquaculture practises at all levels and application of measures for quality control and food safety would ensure sustainable development of prawn farming in Bangladesh.  相似文献   

Effects of salinity on the growth and proximate composition of selected tropical marine periphytic diatoms and cyanobacteria     

Helena Khatoon  Sanjoy Banerjee  Fatimah Md Yusoff  Mohamed Shariff 《Aquaculture Research》2010,41(9):1348-1355

Marine periphytic cyanobacteria and diatoms have been examined as a potential source of feed supplement for rearing aquatic larvae in the aquaculture industry. Culture of the periphytic diatom Amphora sp., Navicula sp., Cymbella sp. and the cyanobacteria Oscillatoria sp. at different salinities showed significant changes in biomass and specific growth rates. Diatoms growth was significantly higher at 35 g L⁻¹, while for cyanobacteria growth was better at 25 g L⁻¹. Significantly higher levels of protein and lipid were found in diatoms at low salinities (15–25 g L⁻¹) and an increase in carbohydrate at high salinities (30–35 g L⁻¹). Conversely, cyanobacteria showed a significantly higher lipid content at 30–35 g L⁻¹ compared with other salinity levels but no significant changes were observed in the protein and carbohydrate contents at different salinity levels. The present findings can be taken into consideration when culturing marine periphytic Amphora sp., Navicula sp., Cymbella sp. and Oscillatoria sp. to provide appropriate levels of protein, lipid and carbohydrate as feed supplement as well as for bioremediation in aquaculture.  相似文献   

Changes in Hormonal Balance: A Possible Mechanism of Pre‐Sowing Chilling‐Induced Salt Tolerance in Spring Wheat     

M. Iqbal  M. Ashraf 《Journal of Agronomy and Crop Science》2010,196(6):440-454

There is a lack of knowledge about factors contributing to the chilling‐induced alleviatory effects on growth of plants under salt stress. Thus, the primary objective of the study was to determine whether chilling‐induced changes in endogenous hormones, ionic partitioning within shoots and roots and/or gaseous exchange characteristics is involved in salt tolerance of two genetically diverses of wheat crops. For this purpose, the seeds of two spring wheat (Triticum aestivum) cultivars, MH‐97 (salt intolerant) and Inqlab‐91 (salt tolerant) were chilled at 3°C for 2 weeks. The chilled, hydroprimed and non‐primed (control) seeds of the two wheat cultivars were sown in both Petri dishes in a growth room and in the field after treatment with 15 dS m^?1 NaCl salinity. Chilling was very effective in increasing germination rate and subsequent growth when compared with hydropriming and control under salt stress. Results from field experiments clearly indicated the efficacy of chilling over hydropriming in improving shoot dry biomass and grain yield in either cultivar, particularly under salt stress. This increase in growth and yield was related to increased net photosynthetic rate, greater potential to uptake and accumulate the beneficial mineral elements (K⁺ and Ca²⁺) in the roots and reduced uptake and accumulation of toxic mineral element (Na⁺) in the shoots of both wheat cultivars when grown under salt stress. Salt‐stressed plants of both wheat cultivars raised from chilled seed had greater concentrations of indoleacetic acid, abscisic acid, salicylic acid and spermine when compared with hydropriming and control. Therefore, induction of salt tolerance by pre‐sowing chilling treatment in wheat could be attributed to its beneficial effects on ionic homeostasis and hormonal balance. The results presented are also helpful to understand the chilling‐induced cross adaptation of plants in natural environments. Moreover, efficacy of pre‐sowing chilling treatment over hydropriming suggested its commercial utilization as a low risk priming treatment for better wheat crop production under stressful environments.  相似文献