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Studies on genetic variability in Trypanosoma evansi have been limited by a lack of high-resolution techniques. In this study, we have investigated the use of inter-simple sequence repeats (ISSR) and microsatellites in revealing polymorphism among T. evansi isolates. Twelve ISSR primers and five microsatellite loci were used to generate polymorphic bands and alleles, respectively, to investigate the genetic variability among T. evansi isolates from Africa and Asia. Seven of the twelve ISSR primers showed variability between isolates with a total of 71 fragments of which 49(69%) were polymorphic. Microsatellite analysis revealed a total of 60 alleles. On average the ISSR markers revealed a higher genetic diversity (23%) than microsatellites (21.1%). The two techniques showed a strong agreement of r=0.95 for Dice and r=0.91 for Jaccard indices in estimating the genetic distances between isolates. The distance UPGMA tree revealed two major clusters of T. evansi which correlate with the minicircle classification of subtype A and B. The cophenetic correlation coefficient between Dice and Jaccard based matrices were r=0.79 for microsatellites and r=0.73 for ISSR indicating a strong agreement between dendrograms. The results suggest that both ISSR and microsatellites markers are useful in detecting genetic variability within T. evansi. 相似文献
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Njiru ZK Ouma JO Bateta R Njeru SE Ndungu K Gitonga PK Guya S Traub R 《Veterinary parasitology》2011,180(3-4):358-362
Trypanosoma vivax is major cause of animal trypanosomiasis and responsible for enormous economic burden in Africa and South America animal industry. T. vivax infections mostly run low parasitaemia with no apparent clinical symptoms, making diagnosis a challenge. This work reports the design and evaluation of a loop-mediated isothermal amplification (LAMP) test for detecting T. vivax DNA based on the nuclear satellite repeat sequence. The assay is rapid with results obtained within 35 min. The analytical sensitivity is ～ 1 trypanosome/ml while that of the classical PCR tests ranged from 10 to 10(3)trypanosomes/ml. The T. vivax LAMP test reported here is simple, robust and has future potential in diagnosis of animal trypanosomiasis in the field. 相似文献
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Anne Mokoro Elijah Oyoo‐Okoth Charles C. Ngugi James Njiru Joseph Rasowo Victoria Chepkirui‐Boit David Manguya‐Lusega 《Aquaculture Research》2014,45(10):1672-1684
We evaluated the effect of varying cage stocking density (60, 90 and 120 fish m?3) and feeding duration (10, 30 and 60 min) in a cage‐cum‐pond‐integrated system on growth performance, water quality and economic benefits in Labeo victorianus culture. Interactions between stocking density and feeding duration significantly (P < 0.05) affected the fish growth performance and yields in the cages‐cum‐pond system. Stocking density of 60 fish m?3 resulted in the highest growth in cages and in ponds regardless of the feeding duration, but produced lower yields than at stocking density 90 fish m?3. The lowest Apparent Food Conversion Ratio (AFCR) in cages occurred at stocking density of 60 fish m?3 and feeding duration of 30 min. Growth performance in the open ponds declined with increased feeding duration of the caged fish. Survival in cages and in the open ponds decreased with increased cage density, but was not affected by feeding duration. Low dissolved oxygen were recorded, at stocking density of 120 fish m?3, the lowest DO occurred when feeding of caged fish lasted 60 min. Growth performance, water quality and economic benefits in Labeo victorianus culture positively respond to interaction between stocking density and feeding durations. 相似文献
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Christopher Mulanda Aura Chrisphine S. Nyamweya Monica Owili Nicholas Gichuru Rodrick Kundu James M. Njiru Micheni Japhet Ntiba 《Fisheries Management and Ecology》2020,27(4):314-324
The present study demonstrates the declining state of the major commercial fisheries of Lake Victoria, Kenya, a situation threatening sustainability of the lake's fishery. Data in the present study were derived from resource monitoring programmes that included hydro‐acoustics (2009–2018), trawl net fishing (2011–2018), frame surveys (2000–2016) and catch assessment surveys (2000–2015). The activities provided information on fish stocks and supported advice for fisheries management. The average fish stock densities for Tanzania, Uganda and Kenya of 8.92, 8.25 and 8.19 t/km2, respectively, were relatively similar. Diplomatic and sustainable efforts for harmony in fish harvesting among the fishers of the riparian countries are encouraged given the interdependence of the lake. The Kenyan and River Kagera regions had a higher proportion (≈ 4% each) of big‐sized Nile perch (≥50 cm total length) in 2018, signifying the critical breeding areas for Nile perch. To sustain the fishery, there is need to enforce a 36%–44% effort reduction for all the major fisheries, and enforcement of gear limits to avoid harvesting of immature fish and destruction of the lake ecosystem. 相似文献
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R.C. Andrew Thompson Doug D. Colwell Todd Shury Amber J. Appelbee Carolyn Read Zablon Njiru Merle E. Olson 《Veterinary parasitology》2009
Coyotes from southern Alberta and Saskatchewan, Canada, were examined for the presence of Giardia and Cryptosporidium and cohabiting helminths. Toxascaris was present in over 90% of the 70 animals examined, and Taenia sp. in 6.5–25% of the two groups of animals studied. Giardia (12.5–21.7%) and Cryptosporidium (0–17.4%) were also common and molecular characterisation revealed both zoonotic and host-adapted genotypes of Giardia, whereas the Cryptosporidium proved to be a variant of the canine species C. canis. The seasonal variation observed in the occurrence of Cryptosporidium may be related to stress-induced shedding of the parasite. 相似文献
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Njiru ZK Constantine CC Ndung'u JM Robertson I Okaye S Thompson RC Reid SA 《Veterinary parasitology》2004,124(3-4):187-199
Camel trypanosomosis (Surra) causes high morbidity and is an impediment to the camel husbandry in Kenya. The lack of a sensitive diagnostic test has hindered the collection of accurate epidemiological data and institution of control programmes. A cross-sectional study was conducted in three districts of Kenya to estimate the prevalence of Trypanosoma evansi (T. evansi) and to compare four diagnostic tests: polymerase chain reaction (PCR), card agglutination test (CATT/T. evansi), microhaematocrit centrifugation technique (MHCT) and mouse inoculation (MI). A total of 549 camels were randomly sampled. The overall prevalence of Surra was 5.3% using MHCT, 26.6% using PCR and 45.9% using CATT/T.evansi. There was a significant difference (P < 0.001) between PCR and CATT/T.evansi test, MHCT and MI in detection of T. evansi. The prevalence of T. evansi was 39.8% in Samburu, 24.7% in Nanyuki and 14.4% in Isiolo districts using PCR. A male camel was 2.6 times more likely to be infected with T. evansi compared to a female camel (OR = 3.0% CI: 1.6, 4.1), while an adult camel was 2.2 times more likely to be infected compared to non-adults (OR = 2.2; 95% CI: 1.2, 5.0). There was a poor association between the presence of the published clinical signs and seropositivity (kappa = 0.12), PCR (kappa = 0.11) and MHCT (kappa = 0.05). However, there was a higher agreement between farmers' classification of disease with the PCR test (kappa = 0.5, n = 61). The mean PCV varied with age, presence of infection, locality and gender, with the lowest mean PCV being recorded in MHCT-positive animals (20.97 +/- 0.5) and from infected calves (19.5 +/- 1.2). This study shows that PCR was more sensitive in detecting T. evansi than other tests used. Further, the prevalence of T. evansi in the camel herds sampled is higher than that previously reported in Kenya, and that the judgment by camel keepers may be a reliable "pen-side" diagnostic test for Surra. Considering the low sensitivity of parasitological techniques in detection of chronic T. evansi infection and high cost of PCR, development of a sensitive pen side diagnostic test, with a low cost is still a priority. 相似文献
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