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1.
James O Harris Christopher M Burke Stephen J Edwards & Deon R Johns 《Aquaculture Research》2005,36(14):1400-1407
Growth and survival of juvenile greenlip (39.03 (SD 3.80) mm (n=524)) and blacklip (31.92 (SD 4.19) mm (n=531) abalone were investigated at high dissolved oxygen levels (95–120% saturation) between 17 and 19°C. Abalone were fed the same artificial diet and each species was contained in groups of approximately 30 individuals within triplicate tanks for each of six treatments and were exposed to flow through water adjusted to give experimental conditions for up to 75 days. Blacklip abalone held at 16.9°C and 97% oxygen saturation grew in shell length significantly faster than all other treatments of blacklip abalone held at 19°C, and significantly faster than blacklip abalone maintained at 111% oxygen saturation and 17.5°C. Both temperature and oxygen saturation significantly affected the survival of this species. Blacklip abalone held at 19°C had significantly lower survival for both 96% oxygen saturation and 120% oxygen saturation, compared with blacklip abalone maintained at either 110% oxygen saturation and 19°C, or for any 17°C treatment. No significant differences were noted for greenlip abalone within the range tested in terms of growth rate, food consumption rate or survival, indicating that greenlip abalone tolerated these conditions better than did blacklip abalone. 相似文献
2.
Gilbert C. Sigua Julio Cesar Pascale Palhares Jalusa Deon Kich Magda Regina Mulinari Rosemari Martini Mattei Jaqueline Bianca Klein Susana Muller Gustavo Plieske 《Water, air, and soil pollution》2010,210(1-4):307-316
Environmental problems many times could evolve when manure-containing pathogens are distributed into an open environment with no effort made to reduce the content of pathogens or limit their movement in the environment. Wind, surface flow, and subsurface flow can all carry enough pathogens to receiving waters to exceed water quality standards. This study was conducted to assess the microbiological quality of water associated with animal-based agriculture in the sub-basin of Pinhal River located in the rural area of Concordia, Santa Catarina, Brazil. Six sampling points representing different agricultural land uses (LU1—dairy cattle; LU2—without animals; LU3—dairy + pigs + poultry + crops; LU4—pigs + poultry + crops; LU5—dairy + pigs + poultry + crops + human; and LU6—dairy+pigs+crops) along the Pinhal River sub-basin (north to south) were sampled biweekly from August 2006 to December 2008. Concentrations of fecal coliforms and Escherichia coli varied significantly (p?≤?0.05) with land use (LU), but there was no interaction effect of LU, season, and time. Water samples from the catchment area of LU1 had the highest concentration of fecal coliforms (4,479?±?597 CFU ml?1) when compared with other catchment areas. Catchment area associated with LU2 (no animal) had the lowest concentrations of fecal coliforms (39.2?±?5.2 CFU ml?1). With the exception of LU2 (control site), all the maximum concentrations of E. coli exceeded the single maximum allowable concentration for E. coli (100 CFU ml?1). When LU1 was compared with other catchment areas (LU3, 50%; LU4, 67%; LU5, 58%; and LU6, 44%), it had the lowest counts (39%) of Salmonella sp. Our results suggest that spatial pattern of bacterial water quality is evident, which can be linked to the different land uses and associated practices (present or absent of animal activities). Therefore, varying responses associated with the different land uses would be critical in identifying the importance of different sources of bacteria in the catchment area and the mechanisms transferring them. 相似文献
3.
Jaciele Beserra de Lira Alberício Pereira de Andrade André Luiz Rodrigues Magalhães Fleming Sena Campos Gherman Garcia Leal de Araújo Diana Signor Deon 《Communications in Soil Science and Plant Analysis》2020,51(5):701-709
ABSTRACTThe objective is to determine the growth, yield and chemical characteristics of pearl millet irrigated with different levels of brackish water and organic matter in two cultivation cycles. The experimental design was randomized blocks in a 4 × 4 factorial arrangement, composed of 4 levels of brackish irrigation (25, 50, 75 and 100% evapotranspiration), 4 levels of organic matter (0, 15, 30 and 45 t ha?1) with 3 repetitions. Along two cultivation cycles, pearl millet crop was analyzed for: plant growth variables, fresh and dry mass production, water-use efficiency, and chemical composition. There was significant interaction between applied water levels and organic matter for lignin in the 2nd cut (P < .05). The number of leaves, number of dead leaves and fresh mass production were influenced by the isolated effect of brackish water levels in cut 1 (P < .05). In turn, fresh mass production, dry mass production, plant height, leaves length, panicle length, fresh mass production, crude protein and ether extract were influenced by the isolated effect of saline water levels in the 2nd cut (P < .05). Growth, biomass production and chemical composition variables in second cut are positively influenced by different brackish irrigation levels under low rainfall conditions. 相似文献
4.
de Castro LA Rodrigues Pedroso T Kuchiishi SS Ramenzoni M Kich JD Zaha A Henning Vainstein M Bunselmeyer Ferreira H 《Veterinary microbiology》2006,116(4):258-269
The Mycoplasma hyopneumoniae genome contains at least 22 regions with a variable number of tandem nucleotide repeats (VNTRs) within coding DNA sequences (CDSs). In this work, the VNTR-containing CDSs were analysed in order to evaluate their degree of variation, possible correlations with antigenic properties, and their potential to be used as a basis for a strain typing PCR assay. We have analysed the VNTRs in five M. hyopneumoniae strains (J, 7448, 7422, PMS, and 232), based on published genomic sequences and on amplified and sequenced DNA segments. These VNTRs are distributed among 12 genes, most of which encode putative surface proteins, including known adhesins. The number of repeat units in any of the VNTRs is highly variable among the analysed strains, but they are, without exception, translationally in frame, and, therefore, code for a variable number of aminoacid repeats (VNTARs). These VNTARs determine putative structural, physicochemical and antigenic variations in the corresponding proteins, with potential implications for aspects associated to M. hyopneumoniae pathogenicity, such as cell adhesion and interactions with the host immune system. Considering that the characterized VNTARs are relatively stable, at least in vitro, and their sizes are strain-specific, we have developed a VNTR-based PCR assay for M. hyopneumoniae strain identification, useful for enzootic pneumonia (EP) diagnosis, strain typing, and distinction of circulating field isolates from vaccine strains in animals vaccinated against EP. 相似文献
5.
Rosangela Simeão Adriane Silva Cacilda Valle Marcos Deon Resende Sérgio Medeiros 《Plant Breeding》2016,135(2):246-253
Half‐sib progenies of congo signal grass (Brachiaria ruziziensis Germain & Evrard, syn.: B. eminii, Urochloa ruziziensis) were analysed using a mixed model methodology. The objective was to estimate genetic and phenotypic parameters, predict individual genetic values, estimate correlations between characters associated with biomass production and forage nutritive value and use this information to determine the economic weights to compare three multiplicative selection indices. Individual narrow‐sense heritabilities corrected for inbreeding varied from 0.14 to 0.91 for characters associated with biomass production and from 0.04 a 0.24 for nutritional value characters. The correlations among characters associated with annual biomass production were of high magnitude. In contrast, biomass production characters were negatively correlated with crude protein, acid detergent fibre and lignin. Total dry matter yield, crude protein and regrowth ability were weighted separately in evaluations during wet and dry season or annually in selection indices. Index that considered characters annually resulted in better distribution of forage production along the year than indices that separated wet and dry season production. 相似文献
6.
Tessa Mazor C. Roland Pitcher Wayne Rochester Michel J. Kaiser Jan G. Hiddink Simon Jennings Ricardo Amoroso Robert A. McConnaughey Adriaan D. Rijnsdorp Ana M. Parma Petri Suuronen Jeremy Collie Marija Sciberras Lara Atkinson Deon Durholtz Jim R Ellis Stefan G. Bolam Michaela Schratzberger Elena Couce Jacqueline Eggleton Clement Garcia Paulus Kainge Sarah Paulus Johannes N. Kathena Mayya Gogina P. Daniël van Denderen Aimee A. Keller Beth H. Horness Ray Hilborn 《Fish and Fisheries》2021,22(1):72-86
Bottom trawl fishing is a controversial activity. It yields about a quarter of the world's wild seafood, but also has impacts on the marine environment. Recent advances have quantified and improved understanding of large‐scale impacts of trawling on the seabed. However, such information needs to be coupled with distributions of benthic invertebrates (benthos) to assess whether these populations are being sustained under current trawling regimes. This study collated data from 13 diverse regions of the globe spanning four continents. Within each region, we combined trawl intensity distributions and predicted abundance distributions of benthos groups with impact and recovery parameters for taxonomic classes in a risk assessment model to estimate benthos status. The exposure of 220 predicted benthos‐group distributions to trawling intensity (as swept area ratio) ranged between 0% and 210% (mean = 37%) of abundance. However, benthos status, an indicator of the depleted abundance under chronic trawling pressure as a proportion of untrawled state, ranged between 0.86 and 1 (mean = 0.99), with 78% of benthos groups > 0.95. Mean benthos status was lowest in regions of Europe and Africa, and for taxonomic classes Bivalvia and Gastropoda. Our results demonstrate that while spatial overlap studies can help infer general patterns of potential risk, actual risks cannot be evaluated without using an assessment model that incorporates trawl impact and recovery metrics. These quantitative outputs are essential for sustainability assessments, and together with reference points and thresholds, can help managers ensure use of the marine environment is sustainable under the ecosystem approach to management. 相似文献
7.
Bonfil R Meÿer M Scholl MC Johnson R O'Brien S Oosthuizen H Swanson S Kotze D Paterson M 《Science (New York, N.Y.)》2005,310(5745):100-103
The large-scale spatial dynamics and population structure of marine top predators are poorly known. We present electronic tag and photographic identification data showing a complex suite of behavioral patterns in white sharks. These include coastal return migrations and the fastest known transoceanic return migration among swimming fauna, which provide direct evidence of a link between widely separated populations in South Africa and Australia. Transoceanic return migration involved a return to the original capture location, dives to depths of 980 meters, and the tolerance of water temperatures as low as 3.4 degrees C. These findings contradict previous ideas that female white sharks do not make transoceanic migrations, and they suggest natal homing behavior. 相似文献
8.
Eder?Jorge?de?OliveiraEmail author Marcos?Deon?Vilela?de?Resende Vanderlei?da?Silva Santos Cláudia?Fortes?Ferreira Gilmara?Alvarenga?Fachardo?Oliveira Maiane?Suzarte?da?Silva Luciana?Alves?de?Oliveira Carlos?Ivan?Aguilar-Vildoso 《Euphytica》2012,187(2):263-276
The main objective of this study was to estimate the selection accuracy and to predict the genetic gain in cassava breeding using genomic selection methodologies. We evaluated 358 cassava genotypes for the following traits: shoot weight (SW), fresh root yield (FRY), starch fraction amylose content (AC), dry matter content (DMC), and starch yield (S-Y). Genotyping was performed using 390 single nucleotide polymorphisms (SNPs), which were used as covariates in the random regression-best linear unbiased prediction model for genomic selection. The heritability values detected by markers for the SW, FRY, AC, DMC, and S-Y traits were 0.25, 0.25, 0.03, 0.20, and 0.26, respectively. Because the low heritability detected for AC, this trait was eliminated from further analysis. Using only the most informative SNPs (118, 92, 56, and 97 SNPs for SW, FRY, DMC, and S-Y, respectively) we observed higher selection accuracy which were 0.83, 0.76, 0.67, and 0.77, respectively to SW, FRY, DMC, and S-Y. With these levels of accuracy and considering a selection cycle reduced by half the time, the theoretical gains with genomic selection compared to phenotypic selection for DMC, FRY, and SW would be 39.42 %, 56.90 %, and 73.96 %, respectively. These results indicate that in the cassava, genomic selection can substantially speed up selection cycles, thereby increasing gains per unit time. Although there are high expectations for incorporating this strategy into breeding programs, we still need to validate the model for other traits and evaluate whether the selection accuracy can be improved using more SNPs. 相似文献
9.
Marinês Bastianel Mariângela Cristofani-Yaly Antonio Carlos de Oliveira Juliana Freitas-Astúa Antonio Augusto Franco Garcia Marcos Deon Vilela de Resende Vandeclei Rodrigues Marcos Antônio Machado 《Euphytica》2009,169(1):101-111
Leprosis, caused by citrus leprosis virus (CiLV) and transmitted by the tenuipalpid mite Brevipalpus phoenicis, is one of the most important viruses of citrus in the Americas. Sweet oranges (Citrus sinensis L. Osb.) are highly susceptible to CiLV, while mandarins (C. reticulata Blanco) and some of their hybrids have higher tolerance or resistance to this disease. The mechanisms involved in the resistance
and its inheritance are still largely unknown. To study the quantitative trait loci (QTL; quantitative trait loci) associated
with the resistance to CiLV, progeny analyses were established with 143 hybrid individuals of ‘Pêra’ sweet orange (C. sinensis L. Osb.) and ‘Murcott’ tangor (C. reticulata Blanco × C. sinensis L. Osb.) from controlled crossings. Disease assessment of the hybrid individuals was conducted by infesting the plants with
viruliferous mites in the field. The experiment consisted of a randomized completely block design with ten replicates. The
evaluated phenotypic traits were incidence and severity of the disease on leaves and branches, for a period of 3 years. The
MapQTL™ v.4.0 software was used for the identification and location of possible QTL associated with resistance to CiLV on
a genetic map obtained from 260 AFLP and 5 RAPD markers. Only consistent QTLs from different phenotypic traits and years of
evaluation, with the critical LOD scores to determine the presence or absence of each QTL calculated through the random permutation
test, were considered. A QTL was observed and had a significant effect on the phenotypic variation, ranging from 79.4 to 84%
depending on which trait (incidence or severity) was assessed. This suggests that few genes are involved in the genetic resistance
of citrus to CiLV. 相似文献
10.
Pinto PM Chemale G de Castro LA Costa AP Kich JD Vainstein MH Zaha A Ferreira HB 《Veterinary microbiology》2007,121(1-2):83-93
Mycoplasma hyopneumoniae is an important pathogen for pigs, being the causative agent of enzootic pneumonia. Recently, the genome sequences of three strains, J, 7448 and 232 have been reported. Here, we describe the results of a proteomic analysis, based on two-dimensional gel electrophoresis of soluble protein extracts, immunoblot and mass spectrometry, which was carried out aiming the identification of gene products and antigenic proteins from the M. hyopneumoniae pathogenic strain 7448. A preliminary M. hyopneumoniae proteome map in two pH ranges (3-10 and 4-7) was produced. A total of 31 different coding DNA sequences (CDSs), including three hypothetical ones, were experimentally verified with the identification of the corresponding protein products by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry. According to the Clusters of Orthologous Groups (COG) functional classification, the identified proteins were assigned to the groups of metabolism (13), cellular processes (5) and information and storage processing (4). Nine of the identified proteins were not classifiable by COG, including some related to cytoadherence and possibly involved in pathogenicity. Moreover, at least five highly antigenic proteins of M. hyopneumoniae were identified by immunoblots, including four novel ones (a heat shock protein 70, an elongation factor Tu, a pyruvate dehydrogenase E1-beta subunit and the P76 membrane protein). The now available proteome map is expected to serve as a reference for comparative analyses between M. hyopneumoniae pathogenic and non-pathogenic strains, and for methabolic studies based on cells cultured under modified conditions. 相似文献