利用16S rRNA全长序列鉴定植物乳杆菌   总被引：5，自引：1，他引：4  

涂宏钢  李存瑞  巫庆华  王荫榆  郭本恒 《乳业科学与技术》2004,27(2):57-61

从标明含有嗜酸乳杆菌的活菌胶囊中分离到一株乳杆菌Lal菌株，利用16S rRNA全序列分析法和传统分类法对Lal菌株进行分类鉴定表明：Lal菌株属于植物乳杆菌种新株系，该菌株现在已经被中国科学院北京微生物所菌种保藏中心收录保存，编号为ASl．2986。  相似文献   

16S rRNA在兽医病原菌分类鉴定中的应用     

荣光  王东劲  周汉林  侯冠彧  黄显州 《热带作物学报》2009,29(10)

介绍16S rRNA基因的特点，阐述其用于病原菌分类鉴定的基本原理，综述其在兽医病原菌分类鉴定中的应用。  相似文献   

Polymerase chain reaction primers for highly selective detection of algicidal Proteobacteria     

Ryuji Kondo  Ichiro Imai 《Fisheries Science》2001,67(2):364-366

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Protein expression of cyclin D₂ and p16 in proliferation and differentiation of cultured cardiac myocytes     

ZHANG Yu-xia  YU Lun-yin  LIU Ming-qiu  ZHANG Zheng-bin TANG Zhi-jiao  XIA Dong  WANG Ming 《园艺学报》2002,18(1):32-35

AIM:To investigate the protein expression of cyclin D₂ and p16 in proliferation and differentiation of cultured cardiac myocytes.METHODS:One-day-old Sparague-Dawley rats were used. Cardiac myocytes(CM) were collected by a trypsin-dispersal method and cultured. Cell growth line and fluorescence activated cell sorting (FACS) were used to investigate the proliferation of CM. Ultra-thin sections were made to observe the ultrastructure of CM under transmission electron microscope. The expression of cyclin D₂ and p16 in CM were measured using immunocytochemistry and image analysis.RESULTS:①Results of cell growth line and FACS analysis showed that cultured CM could proliferate in the first 3 cultured days, but the ability decreased quickly, concomitant with differentiation. CM was obseved quiescent in cell cycle three days later. The ultrastructure of CM showed the large amount of myofilaments and mitochondrion. ②The protein expression of cyclin D₂ in 3,4,5 day CM group was 0.89 times(P＜0.05),0.80 times (P＜0.05) and 0.56 times (P＜0.01) of that in 1 day group, respectively. The expression of p16 in CM was increased during the culture process, 2,3,4,5 day group were 1.63 times, 1.72 times, 1.99 times and 2.84 times (P＜0.01) of that in 1 day group, respectively.CONCLUSION:Cultured neonatal rat cardiac myocytes could proliferate during the first 3 days after incubation, but the ability of proliferation decreased, from the fourth day, concomitant with differentiation. Cyclin D₂ and p16 play the key roles in CM postnatal development. Downregulation of cyclin D₂ and upregulation of p16 may induce CM differentiation.  相似文献   

Molecular Identification of a New Member of the Clover Proliferation Phytoplasma Group (16SrVI) Associated with Centaurea Solstitialis Virescence in Italy     

Francesco Faggioli  Graziella Pasquini  Valentina Lumia  Gaetano Campobasso  Timothy L. Widmer  Paul C. Quimby Jr 《European journal of plant pathology / European Foundation for Plant Pathology》2004,110(4):353-360

In the United States, yellow starthistle (Centaurea solstitialis) is an annual invasive weed with Mediterranean origins. Malformed plants displaying witches' broom, fasciations, abortion of buds and flower virescence symptoms were observed in central Italy. Attempts to transmit the causal agent from the natural yellow starthistle host to periwinkle by grafting, resulted in typical symptoms of a phytoplasma, i.e. yellowing and shortening of internodes. The detection of phytoplasmas was obtained from both symptomatic yellow starthistle and periwinkle by the specific amplification of their 16S-23S rRNA genes. PCR amplification of extracted DNA from symptomatic plant samples gave a product of expected size. Asymptomatic plants did not give positive results. An amplicon obtained by direct PCR with universal primers P1/P7 was cloned and sequenced. The homology search using CLUSTALW program showed more than 99% similarity with Illinois elm yellows (ILEY) phytoplasma from Illinois (United States) and 97% with Brinjal little leaf (BLL) phytoplasma from India. Digestion of the nested-PCR products with restriction enzymes led to restriction fragment length polymorphism patterns referable to those described for phytoplasmas belonging to the clover proliferation (16S-VI) group. Since this is a previously undescribed disease, the name Centaurea solstitialis virescence has been tentatively assigned to it. This is a new phytoplasma with closest relationships to ILEY and BLL, but distinguishable from them on the basis of 16S rDNA homology, the different associated plant hosts and their geographical origin.  相似文献   

猪附红细胞体16S rRNA基因的序列测定和系统进化分析   总被引：11，自引：3，他引：11  

张浩吉  谢明权  张健騑  覃宗华  顾万军  蔡建平 《畜牧兽医学报》2005,36(6):596-601

从确诊为猪附红细胞体感染的猪场，无菌采集血样，抽提猪附红细胞体基因组DNA，采用真细菌的通用引物进行16S rRNA基因扩增，对扩增产物进行克隆和测序。从3个地理位置不同的猪场均成功地扩增出长度为1469bp的核苷酸序列。系统进化分析表明，3个猪场样品所测序列一致性达99．52％以上，具有相同的基因型，但与国外报道的猪附红细胞体Illinois株同源性为95％，属于同一基因群，但基因型不同；所有种类的附红细胞体和血巴尔通氏体组成同一进化分支，这类血营养菌与支原体科，支原体属的病原最靠近(75％)，而与立克次氏体目的病原较远(70％)。上述研究证实，广东所流行的猪附红细胞体是一种新基因型的猪附红细胞体，建议命名为猪附红细胞体广东株型；为反映进化关系，猪附红细胞体和其它血营养菌应划归于支原体科的支原体属。  相似文献   

规模化畜禽养殖场粪便中多重耐药菌分离鉴定及其耐药特征   总被引：2，自引：1，他引：1  

唐伟欣  孙兴滨  高浩泽  程首涛  仇天雷  王旭明 《农业环境科学学报》2020,39(1):207-216

为了解禽畜粪便中多重耐药菌的污染特征,本研究对鸡粪、牛粪、猪粪和有机肥这4种不同样品中多重耐药菌进行了计数分析,并对不同来源的多重耐药菌株进行了分离和纯化,进一步开展了基于16S rDNA序列比对的分子生物学鉴定以确定其种属地位,以及基于药敏试验的耐药性特征分析。结果表明:不同养殖动物粪便中四环素、恩诺沙星、磺胺甲恶唑和泰乐菌素4种抗生素多重耐药菌的绝对数量和相对数量排序均为鸡粪>猪粪>牛粪,粪源有机肥中可培养的多重耐药菌的绝对数量和相对数量在堆肥后均有所下降。通过对耐药菌株鉴定和分类学分析,发现禽畜粪便中多耐药菌的菌门集中分布在Proteobacteria、Firmicutes和Actinobacteria,多重耐药菌的优势菌属为Escherichia、Corynebacterium、Kurthia;而有机肥样品中多重耐药菌的优势菌属为Staphylococcus、Glutamicibacter。菌株的药敏试验表明,3类动物粪污中的多重耐药菌都对红霉素、四环素有着较高的耐药率,均高于80%,而对阿米卡星这种抗生素表现出较好的敏感性,其耐药率低于30%。通过对Ⅰ、Ⅱ类整合子基因盒的扩增,发现PCR产物的大小从0.8 kb到1.8 kb不等,基因盒ad A2、dfr A17、dfr A1及sat2在养殖场粪污中检出率均较高。  相似文献   

Identification of a phytoplasma associated with pomegranate little leaf disease in Iran     

《Crop Protection》2016

During 2012–2014 surveys for the presence of phytoplasma diseases in Fars province (Iran), pomegranate little leaf symptoms were observed in several orchards in Khafr and Neyriz areas. Samples collected from symptomatic plants positively reacted in nested PCR assays using P1/P7 followed by R16F2n/R16R2 primer pairs producing the expected 1,250 bp DNA fragments. Real and virtual RFLP analysis showed that the sequences of phytoplasma strains from Khafr and Neyriz (KPLL and NPLL strains, respectively) were identical to each other and belong to 16SrII phytoplasma group, subgroup D. Phylogenetic analysis of the R16F2n⁄R16R2 DNA region confirmed that KPLL and NPLL phytoplasmas were enclosed in the same clade as other 16SrII-D subgroup phytoplasmas. This is the first reported occurrence of a 16SrII phytoplasma infecting pomegranate trees.  相似文献   

First transgenic trait for control of plant bugs and thrips in cotton     

Waseem Akbar  Anilkumar Gowda  Jeffrey E Ahrens  Jason W Stelzer  Robert S Brown  Scott L Bollman  John T Greenplate  Jeffrey Gore  Angus L Catchot  Gus Lorenz  Scott D Stewart  David L Kerns  Jeremy K Greene  Michael D Toews  David A Herbert  Dominic D Reisig  Gregory A Sword  Peter C Ellsworth  Larry D Godfrey  Thomas L Clark 《Pest management science》2019,75(3):867-877

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球等鞭金藻三级培养过程中细菌群落多样性分析     

孔周雁  张羽帆  凌婷  曹嘉懿  徐继林 《核农学报》2020,34(3):506-514

球等鞭金藻三级培养过程中生长差异明显,在完全灭菌的一级培养中生长最佳,在未灭菌的三级培养中生长最差。为揭示培养过程中藻际细菌群落多样性与其生长差异的相关性,以球等鞭金藻(Isochrysis galbana)为研究对象,利用Illumina HiSeq平台通过高通量测序的方法对球等鞭金藻三级培养过程中细菌群落多样性进行研究。结果表明,一、二、三级培养组之间的藻际细菌群落组成差异明显。Shannon和Simpson指数分析说明,一级培养组中细菌群落多样性显著低于二级和三级培养组。MetaStat分析发现,一级和三级培养组之间存在两株丰度显著差异的细菌,其中麦氏交替单胞菌(Alteromonas macleodii)在三级培养下丰度显著高于一级,而红球菌(Rhodococcus erythropolis)相反。进一步通过2216E平板涂布法分离并鉴定了麦氏交替单胞菌等17株球等鞭金藻藻际环境细菌;系统进化树构建结果显示,整个进化树分成13个分支,分别对应13个属,包括交替单胞属(Alteromonas)、假交替单胞属(Pseudoalteromonas)、海杆菌属(Marinobacter)等。本研究结果为探索藻菌互作机理奠定了基础,有助于提高水产养殖过程中球等鞭金藻的产量和质量。  相似文献