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1.
miR-193b及其靶基因Kit在不同毛色羊驼皮肤中的表达 总被引：1，自引：0，他引：1
本研究旨在检测miR-193b及其靶基因Kit在不同毛色羊驼皮肤中的表达,并分析它们与羊驼毛色的关系。试验以不同毛色的成年羊驼为研究对象,应用实时荧光定量PCR技术(QRT-PCR)对miR-193b及Kit在不同毛色羊驼皮肤中的相对表达量进行检测。结果显示,miR-193b在棕色羊驼中显著表达,其相对表达量是白色羊驼的1.741346倍;而Kit在白色羊驼中显著表达,其相对表达量是棕色羊驼的4.6029倍。通过以上研究结果显示miR-193b及其靶基因Kit可能参与羊驼毛色形成过程。提示,miR-193b可能通过负调控Kit参与羊驼毛色形成。 相似文献
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周期素依赖性蛋白激酶-5在不同毛色羊驼皮肤中的表达 总被引：1，自引：1，他引：0
本研究旨在探索周期素依赖性蛋白激酶-5(CDK5)在羊驼皮肤中的表达与功能。以不同毛色的成年羊驼为研究对象,采用免疫组织化学法对CDK5在羊驼皮肤中的表达进行定位和定性研究,并利用实时荧光定量PCR技术分析了不同毛色羊驼皮肤CDK5基因的相对表达量。免疫组织化学结果显示CDK5在羊驼皮肤毛囊的外根鞘和毛球部呈阳性表达,根据光密度值分析得出CDK5在不同毛色羊驼毛囊中的表达差异显著(P0.05)。实时荧光定量PCR结果显示棕色羊驼中CDK5mRNA相对基因表达量是白色羊驼的1.6245倍。结果提示CDK5可能与羊驼毛色形成相关。 相似文献
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Wnt3a在不同毛色羊驼皮肤中的表达和定位 总被引：2，自引：0，他引：2
本研究旨在探索Wnt3a在羊驼皮肤中的表达与定位.以不同毛色的成年羊驼为研究对象,应用荧光定量PCR技术分析不同毛色羊驼皮肤Wnt3a基因的相对表达量,并运用Western blotting及免疫组织化学法对Wnt3a蛋白在不同毛色羊驼皮肤中进行表达和定位研究.结果:荧光定量PCR结果显示棕色羊驼中Wnt3a mRNA相对表达量是白色羊驼的2.9702倍;Western blotting结果表明,羊驼皮肤组织组蛋白提取物中存在相对分子质量约39 ku的产物,棕色羊驼皮肤平均蛋白表达量显著高于白色羊驼;免疫组织化学结果显示Wnt3a在羊驼皮肤毛囊的根鞘和毛球部呈阳性表达,根据光密度值分析得出Wnt3a在棕色和白色羊驼毛囊中的表达差异显著(P＜0.05).通过以上研究显示Wnt3a可能与羊驼毛色形成具有相关性. 相似文献
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动物毛色是一种容易被识别的表型,也可作为筛查某些疾病的有效手段。毛色主要由黑色素细胞产生的真黑色素和棕黑色素的分布、比例和产生速率所决定。许多基因对黑色素的产生和分布起着重要调控作用,各基因间的不同基因型形成多种基本毛色、淡化毛色和花斑。此外,miRNA靶向结合毛色主效基因mRNA,诱导抑制/增强其转录翻译过程,从而调控毛色基因的表达,影响黑色素合成。文章简述了家畜调控毛色的主效基因黑色素皮质素受体1（MC1R）、野灰位点信号蛋白（ASIP）、原癌基因（KIT）、酪氨酸酶关联蛋白（TYRP）、小眼畸形相关转录因子（MITF）和内皮素受体B（EDNRB）的DNA序列多态性（不同基因型）与毛色性状、疾病之间的关系;介绍了毛色形成相关miRNA挖掘鉴定、miRNA调控毛色相关基因研究进展与毛色基因研究应用价值,旨在为今后研究家畜毛色机理提供理论依据。 相似文献
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为了获得羊驼Bclaf1基因cDNA序列,研究该基因在羊驼皮肤中的表达特征.本研究对已构建的羊驼皮肤cDNA文库进行筛选和ESTs分析,并运用免疫组化技术对Bclaf1在羊驼皮肤中的表达进行组织定位.结果,羊驼Bclaf1基因与褐鼠、小鼠、狗、人和黑猩猩Bclaf1基因相应cDNA序列的相似性分别为100%,92.9%、86.0%、81.1%和77.9%.Bclaf1在幼年羊驼毛囊中没有阳性细胞,在成年羊驼、白色和棕色羊驼毛囊的外根鞘处集中表达;根据光密度值分析得Belaf1在不同毛色羊驼毛囊中的表达差异显著.结果表明,Betaf1基因在羊驼皮肤中的表达和定位随年龄和毛色而变化. 相似文献
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不同被毛颜色羊驼皮肤组织中成熟黑色素细胞的组织学分析 总被引：4，自引：0，他引：4
羊驼是已知家养动物中天然被毛颜色最为丰富的动物之一,本研究旨在在组织水平上观察不同被毛颜色羊驼皮肤组织中成熟黑色素细胞的分布与定位,以揭示羊驼丰富被毛颜色发生的细胞学机制。试验选择白色被毛和有色被毛成年羊驼各1头,盛毛期体侧取样,制备石蜡切片,分别采用多巴染色、甲苯胺蓝染色及多巴—甲苯胺蓝复染,光镜观察、拍照。结果表明,在不同被毛颜色羊驼皮肤组织中均有成熟黑色素细胞的分布,但是分布规律不同,在有色被毛皮肤组织主要分布于毛根成形部,在毛根永久部及表皮也有分布,但是数量较少;白色被毛组织主要分布于表皮,在毛根成形部分布很少,而在真皮部及毛根永久部有少量分布。结果提示:1)羊驼不同被毛颜色发生取决于毛根成形部成熟黑色素细胞的数量;2)从一个侧面佐证了毛囊黑色素细胞与皮肤黑色素细胞在执行功能以及它们所接受的调节信号是不同的。 相似文献
8.
β-catenin在不同毛色羊驼皮肤中的表达和定位 总被引：2，自引：1，他引：1
旨在研究β-catenin在不同毛色羊驼皮肤中的表达和定位,探索其与毛色的关系。以成年白色和棕色羊驼为研究对象,采用实时荧光定量PCR技术、Western blot和免疫组织化学技术,对β-catenin在白色和棕色羊驼皮肤中mRNA、蛋白表达水平和定位进行研究。实时荧光定量PCR结果显示,β-catenin在棕色羊驼皮肤组织中的相对基因表达量是白色羊驼皮肤组织的1.662倍;Western blot结果显示,羊驼皮肤组织粗蛋白提取物中存在分子量约85 ku与兔抗β-catenin多克隆抗体发生免疫阳性反应的蛋白条带,棕色羊驼平均蛋白表达量显著高于白色羊驼;免疫组织化学结果显示,β-catenin在羊驼皮肤的表皮、毛乳头、毛根鞘和皮脂腺中表达,根据光密度值得出,除皮脂腺之外,在表皮、毛乳头和毛根鞘的表达差异极显著(P0.01)。结果提示β-catenin在白色和棕色羊驼皮肤组织中定位以及表达的差异,表明β-catenin参与毛色形成。 相似文献
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本研究旨在探究特定杂交模式下产生全黑被毛绵羊TYR、MC1R及Agouti基因互作调控毛色的机制。随机选取黑色和白色被毛绵羊各4只,采集皮肤组织,利用qRT-PCR技术测定MC1R、Agouti及TYR基因mRNA在不同毛色绵羊皮肤中的表达量。结果显示:MC1R、Agouti及TYR基因在不同毛色绵羊皮肤中均有表达,其中TYR基因mRNA在黑色绵羊皮肤中的表达量极显著高于白色绵羊皮肤(P<0.01),MC1R基因mRNA在黑色绵羊皮肤中的表达量高于白色绵羊皮肤,但差异不显著,Agouti基因mRNA在黑色绵羊皮肤中的表达量显著低于白色绵羊皮肤(P<0.05)。综上,该杂交模式下产生的黑色绵羊可能是由于Agouti基因表达量低而使α-MSH诱导信号通路处于激活状态,上调了TYR基因表达量,导致真黑素含量上升,出现黑色毛色性状。 相似文献
10.
Pengyan Song Qiaoxian Yue Qiang Fu Xiangyun Li Xujing Li Rongyan Zhou Xiaoyong Chen Chenyu Tao 《Reproduction in domestic animals》2021,56(1):46-57
To investigate the regulatory mechanism of the follicular–luteal phase transition in Turpan black sheep (Ovis aries), the genome-wide expression patterns of microRNAs (miRNAs) and genes were investigated in ovaries of six sheep (3 years and single lamb with 3 consecutive births) during follicular and luteal phases of the oestrous cycle. Bioinformatic analysis was used to screen potential miRNAs and genes related to Turpan black sheep ovarian function. RT-qPCR was used to validate the sequencing results. In total, we identified 139 known and 71 novel miRNAs in the two phases with miRNA-seq, and a total of 19 miRNAs were significantly differentially expressed, of which 7 were up-regulated and 12 were down-regulated in the follicular phase compared with luteal phase. A total of 150 genes were significantly differentially expressed, including 63 up-regulated and 87 down-regulated in the follicular phase compared with the luteal phase by RNA-seq data analysis. Those DEGs were significantly enriched in 103 GO terms and several KEGG pathways, including metabolic pathway, ovarian steroidogenesis, steroid hormone biosynthesis and oestrogen signalling pathway. In addition, we created a miRNA–mRNA regulatory network to further elucidate the mechanism of follicular–luteal transition. Finally, we identified key miRNAs and genes including miR-143, miR-99a, miR-150, miR-27a, miR-125b, STAR, STAT1, which might play crucial roles in reproductive hormone biosynthesis and follicular development. The miRNA–mRNA interactive network clearly illustrates molecular basis involving in follicular–luteal transition. 相似文献
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ABSTRACT 1. Melanin content is considered an important indicator of meat quality in black-boned chickens, which have a high market value. To understand the complex physiological processes underlying muscle melanogenesis in this chicken, differentially expressed miRNAs (DEMs) were detected between black muscle (BM) and white muscle (WM) of chickens using high-throughput sequencing technology. Six small RNA libraries were constructed, and more than 16.75 million clean reads were obtained for each library. 2. A total of 582 known miRNAs and 65 novel miRNAs were identified from the six chicken sequence libraries. A total of 19 DEMs were identified between the two groups, of which nine were upregulated and 10 were downregulated. Furthermore, the DEMs were predicted to target 572 genes. 3. Certain DEMs (such as miR-204, miR-133b, and miR-12 229-3p) and their target genes may play an important role in muscle melanogenesis of chickens. These findings provide a foundation for clarifying the miRNA regulatory mechanisms involved in muscle pigmentation in avian species. 相似文献
12.
成年滩羊和小尾寒羊皮肤毛囊差异表达miRNA的筛选 总被引：1，自引：0，他引：1
《中国畜牧杂志》2019,(8)
为比较miRNA在小尾寒羊和滩羊皮肤毛囊中的表达差异,本研究利用高通量测序技术分析了成年滩羊(TY_1)和小尾寒羊(XWHY_1)皮肤毛囊组织中miRNAs的表达谱,在2个品种绵羊皮肤毛囊组织中共鉴定出561个miRNAs,其中包括138个已知和423个新发现的miRNAs。鉴定出的miRNAs进行表达量差异分析发现,在TY_1与XWHY_1共筛选到63个上调和16个下调的miRNAs。对差异表达miRNA靶基因预测后与基因本体数据库(GO)和京都基因与基因组百科全书(KEGG)比对,分别获得靶基因的注释信息为3 886个和4 449个。GO统计发现,差异表达miRNA的靶基因主要参与代谢过程、催化活性、细胞进程和细胞组分等;而KEGG通路分析表明,4 449个靶基因富集到113个信号通路上,其中在嘌呤代谢、内吞作用和糖酵解/糖异生等信号通路上富集显著。综上,在小尾寒羊和滩羊皮肤毛囊中筛选到的差异表达miRNA可能通过调控其靶基因最终参与了绵羊皮肤毛囊的发育。 相似文献
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Osamu Ichii Saori Otsuka Hiroshi Ohta Akira Yabuki Taro Horino Yasuhiro Kon 《Research in veterinary science》2014
MicroRNAs (miRNAs) play a role in the pathogenesis of certain diseases and may serve as biomarkers. Here, we present the first analysis of miRNA expression in the kidneys of healthy cats and dogs. Kidneys were divided into renal cortex (CO) and medulla (MD), and RNA sequence analysis was performed using the mouse genome as a reference. A total of 277, 276, 295, and 297 miRNAs were detected in cat CO, cat MD, dog CO, and dog MD, respectively. By comparing the expression ratio of CO to MD, we identified highly expressed miRNAs in each tissue as follows: 41 miRNAs including miR-192-5p in cat CO; 45 miRNAs including miR-323-3p in dog CO; 78 miRNAs including miR-20a-5p in cat MD; and 11 miRNAs including miR-132-5p in dog MD. Further, the target mRNAs of these miRNAs were identified. These data provide veterinary medicine critical information regarding renal miRNA expression. 相似文献
15.
Wangsheng Zhao Tajmal Hussain Solangi Yitao Wu Xiankang Yang Chuanfei Xu Hongmei Wang Xuxin Zheng Xin Cai Jiangjiang Zhu 《Reproduction in domestic animals》2021,56(4):555-576
The epididymis is the site of post-testicular sperm maturation, which constitutes the acquisition of sperm motility and the ability to recognize and fertilize oocytes. The role of miRNA in male reproductive system, including the control of different steps leading to proper fertilization such as gametogenesis, sperm maturation and maintenance of male fertility where the deletion of Dicer in mouse germ cells led to infertility, has been demonstrated. The identification of miRNA expression in a region-specific manner will therefore provide valuable insight into the functional differences between the regions of the epididymis. In this study, we employed RNA-seq technology to explore the expression pattern of miRNAs and establish some miRNAs of significant interest with regard to epididymal sperm maturation in the CY epididymis. We identified a total of 431 DE known miRNAs; 119, 185 and 127 DE miRNAs were detected for caput versus corpus, corpus versus cauda and caput versus cauda region pairs, respectively. Our results demonstrate region-specific miRNA expression in the CY epididymis. The GO and KEGG enrichment for the predicted target genes indicated the functional values of miRNAs. Furthermore, we observed that the expression of miR-200a was downregulated in the caput, compared with cauda. Since the family of miR-200 has previously been suggested to contribute to the distinct physiological function of sperm maturation in epididymis of adult rat, we speculate that the downregulation of miR-200a in CY caput epididymis may play an important role of sperm maturation in the epididymis of CY. Therefore, our findings may not only increase our understanding of the molecular mechanisms regulated by the miRNA functions in region-specific miRNA expression in the CY epididymis, it could provide a valuable information to understand the mechanism of male infertility of CY. 相似文献
16.
Peter Vegh Amir B.K. Foroushani David A. Magee Matthew S. McCabe John A. Browne Nicolas C. Nalpas Kevin M. Conlon Stephen V. Gordon Daniel G. Bradley David E. MacHugh David J. Lynn 《Veterinary immunology and immunopathology》2013
MicroRNAs (miRNAs) are important regulators of gene expression and are known to play a key role in regulating both adaptive and innate immunity. Bovine alveolar macrophages (BAMs) help maintain lung homeostasis and constitute the front line of host defense against several infectious respiratory diseases, such as bovine tuberculosis. Little is known, however, about the role miRNAs play in these cells. In this study, we used a high-throughput sequencing approach, RNA-seq, to determine the expression levels of known and novel miRNAs in unchallenged BAMs isolated from lung lavages of eight different healthy Holstein–Friesian male calves. Approximately 80 million sequence reads were generated from eight BAM miRNA Illumina sequencing libraries, and 80 miRNAs were identified as being expressed in BAMs at a threshold of at least 100 reads per million (RPM). The expression levels of miRNAs varied over a large dynamic range, with a few miRNAs expressed at very high levels (up to 800,000 RPM), and the majority lowly expressed. Notably, many of the most highly expressed miRNAs in BAMs have known roles in regulating immunity in other species (e.g. bta-let-7i, bta-miR-21, bta-miR-27, bta-miR-99b, bta-miR-146, bta-miR-147, bta-miR-155 and bta-miR-223). The most highly expressed miRNA in BAMs was miR-21, which has been shown to regulate the expression of antimicrobial peptides in Mycobacterium leprae-infected human monocytes. Furthermore, the predicted target genes of BAM-expressed miRNAs were found to be statistically enriched for roles in innate immunity. In addition to profiling the expression of known miRNAs, the RNA-seq data was also analysed to identify potentially novel bovine miRNAs. One putatively novel bovine miRNA was identified. To the best of our knowledge, this is the first RNA-seq study to profile miRNA expression in BAMs and provides an important reference dataset for investigating the regulatory roles miRNAs play in this important immune cell type. 相似文献
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本试验旨在研究影响动物被毛颜色变化的功能基因ASIP在野猪群体里的变异及其与被毛表型之间的相关性。通过直接测序法搜寻ASIP基因编码区、5′ UTR、3′ UTR和部分内含子区域突变位点。结果表明：在ASIP基因的3′ UTR区域识别了一个T→C突变位点（ASIP.c 695 T→C），而在其它区域没用发现。通过群体内多态性检测，7个毛色类型的野猪在此突变位点都是CC或CT基因型，而长白猪群全部是TT基因型。从这个结果得出具有不同毛色的野猪群体可能是由突变位点C等位基因引起，不能排除还有其它毛色功能基因参与野猪被毛的形成。研究为进一步了解野猪ASIP毛色功能基因在其群体内的遗传变异奠定了理论基础。 相似文献
19.
Lucia Unger Vinzenz Gerber Alicja Pacholewska Tosso Leeb Vidhya Jagannathan 《Veterinary and comparative oncology》2019,17(1):107-117
Serum and whole blood microRNA (miRNA) fingerprints have been proposed as a new class of non‐invasive human cancer biomarkers. In this study, we compared equine sarcoid (ES) disease‐specific serum and whole blood miRNA fingerprints and correlated them to miRNA expression in sarcoid tissue. After high throughput sequencing, miRNA differential expression analysis between six ES‐affected and five control horses was carried out in serum and whole blood using a DESeq algorithm, accounting for the influence of hemolysis and the white blood cell count. Target gene, pathway prediction and enrichment analyses were conducted using TarBase, mirPath and GeneCodis. After exclusion of 4 hemolyzed out of a total of 11 serum samples, 9 miRNAs were found to be differentially expressed in serum of ES vs control horses. In whole blood, all 11 samples showed normal white blood cell counts and 19 miRNAs were found to be differentially expressed. A total of 2/9 serum and 7/19 whole blood differentially expressed miRNAs were also highly expressed at the tissue level and their predicted target genes were associated with cancer pathways. Serum and whole blood miRNA expression allowed discrimination between ES and control horses and merits further validation in a larger study cohort. The use of whole blood might be superior because it has higher miRNA content and is less influenced by pre‐analytical variables compared to serum. Concurrent dysregulation of single miRNAs in tissue and blood suggests a possible biological function of circulating miRNAs. 相似文献
20.
本研究旨在探索环状RNA（circular RNA，circRNA）在香猪皮肤、皮下脂肪及背最长肌的表达及其潜在功能。本研究采用RNA-Seq技术和生物信息学方法，分析香猪皮肤、皮下脂肪及背最长肌circRNA的表达，对3种组织特有circRNA亲本基因进行GO和KEGG富集分析，对样品组织结构功能相关亲本基因中circRNA结合的靶miRNA进行预测。从香猪3种组织表达谱中共鉴定出6 483个circRNAs，皮肤、皮下脂肪及背最长肌分别鉴定出4 575、5 180、5 219个circRNAs，其中特异性表达的分别有83、234、586个；circRNAs在染色体上分布广泛，主要来源于外显子，少数来源于内含子和基因间隔区；多数circRNAs表达量较低；皮肤特有circRNAs的亲本基因主要参与蛋白水解、RNA转运、缝隙连接等过程，其中NF1、MAPK1等亲本基因与皮肤性疾病相关，可能以circRNAs的形式发挥作用，其中亲本基因MAPK1中的circRNA（circ-MAPK1）可结合miR-18a、miR-132、miR-411等，可能参与调控胶原蛋白的形成；皮下脂肪特有circRNAs的亲本基因富集于脂肪细胞生长、发育及癌症等信号通路，ABHD5、PTPN11等亲本基因与脂肪代谢有关，circ-PTPN11结合的miR-103、miR-107、miR-199a-5p等参与调控脂肪细胞增殖、分化及脂质沉积；背最长肌特有的circRNAs亲本基因富集于癌症、感染、肌肉发育等过程，ROCK2、PPP1CC等基因与肌细胞分化及肌肉收缩相关，circ-PPP1CC结合的miR-339、miR-181a、miR-181b等参与调控肌细胞分化、增殖及生长。综上，本研究筛选出的circRNAs及其结合的miRNAs可能参与皮肤胶原蛋白形成、脂肪沉积、肌细胞分化成熟等生物学过程。 相似文献