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根据Genbank中折光马尔太虫的基因保守序列,设计了3条特异性引物,通过对半套式PCR扩增条件的优化,研究建立了检测贝类折光马尔太虫的半套式PCR方法.该方法对折光马尔太虫模板进行扩增,得到与实验设计相符的228 bp的特异性扩增带,而对单孢子虫、派琴虫、副溶血弧菌、溶藻弧菌和河弧菌等病原体的扩增,结果全为阴性.敏感性试验结果表明,该技术最低能检测到0.01 fg的折光马尔太虫质粒DNA.用该半套式PCR对福建沿海的贝类样品进行检测,结果从溢蛏中检出折光马尔太虫7份,结果提示福建沿海养殖的贝类中存在折光马尔太虫感染,建立的半套式PCR方法可以用于贝类折光马尔太虫的临床快速检测. 相似文献
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贝类折光马尔太虫PCR检测方法的建立 总被引：1，自引：0，他引：1
根据基因库中折光马尔太虫的基因保守序列,设计了1对特异性引物,通过对PCR扩增条件的优化,研究建立了检测贝类折光马尔太虫的PCR方法。该方法对折光马尔太虫模板进行扩增,得到与试验设计相符的478 bp的特异性扩增带,而对派琴虫、单孢子虫、嗜水气单胞菌、荧光假单胞菌、副溶血弧菌、溶藻弧菌和河弧菌等病原体的扩增,结果全为阴性。敏感性试验结果表明,该技术最低能检测到1 pg的折光马尔太虫DNA。用该PCR对广西沿海的119份牡蛎病料进行检测,折光马尔太虫的阳性率为1.68%,结果提示了中国南方沿海的养殖贝类中存在折光马尔太虫的感染,建立的PCR方法可以用于贝类折光马尔太虫的临床快速检测。 相似文献
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贝类派琴虫和单孢子虫双重PCR检测方法的建立 总被引：1，自引：0，他引：1
根据基因库中派琴虫和单孢子虫的基因序列,分别设计了2对特异性引物,通过对双重PCR扩增条件的优化,建立了可同时检测鉴别这2种原虫的双重PCR。对同一样品中的派琴虫和单孢子虫模板进行扩增,结果均同时得到2条大小与试验设计相符的596bp(派琴虫)和244bp(单孢子虫)的特异性扩增带,对其他贝类病原核酸的扩增结果为阴性。敏感性试验结果表明,最低能检测到10pg的派琴虫和单孢子虫DNA。用该双重PCR对广西沿海的104份牡蛎、49份贻贝和20份文蛤病料进行检测,派琴虫的阳性率分别为14.6%,10.6%和15%,而未检出单孢子虫,结果提示派琴虫广泛存在于中国南方沿海的养殖贝类中,建立的PCR方法可以用于贝类派琴虫和单孢子虫的临床快速检测。 相似文献
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根据基因库中派琴虫和折光马尔太虫的基因序列,分别设计了二对特异性引物,通过对二重PCR扩增条件的优化,研究建立了可同时检测鉴别这二种原虫的多重PCR。该技术对同一样品中的派琴虫和折光马尔太虫模板进行扩增,结果均同时得到2条大小与实验设计相符的596bp（派琴虫）和478bp（折光马尔太虫）的特异性扩增带,而对单孢子虫、嗜水气单胞菌、荧光假单胞菌、副溶血弧菌、溶藻弧菌、河弧菌和拟态弧菌等病原体的扩增,结果全为阴性。敏感性试验结果表明,该技术最低能检测到10Pg的派琴虫和折光马尔太虫DNA。用该二重PCR对广西沿海的119份牡蛎样品进行检测,结果派琴虫和折光马尔太虫的阳性率分别为9．24％和1．68％,提示了中国南方沿海的养殖贝类中存在派琴虫和折光马尔太虫的感染。 相似文献
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根据基因库中派琴虫和折光马尔太虫的基因序列,分别设计了二对特异性引物,通过对二重PCR扩增条件的优化,研究建立了可同时检测鉴别这二种原虫的多重PCR。该技术对同一样品中的派琴虫和折光马尔太虫模板进行扩增,结果均同时得到2条大小与实验设计相符的596bp(派琴虫)和478bp(折光马尔太虫)的特异性扩增带,而对单孢子虫、嗜水气单胞菌、荧光假单胞菌、副溶血弧菌、溶藻弧菌、河弧菌和拟态弧菌等病原体的扩增,结果全为阴性。敏感性试验结果表明,该技术最低能检测到10pg的派琴虫和折光马尔太虫DNA。用该二重PCR对广西沿海的119份牡蛎样品进行检测,结果派琴虫和折光马尔太虫的阳性率分别为9.24%和1.68%,提示了中国南方沿海的养殖贝类中存在派琴虫和折光马尔太虫的感染。 相似文献
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根据基因库中单孢子虫和折光马尔太虫的基因序列,分别设计了2对特异性引物,通过对二重PCR扩增条件的优化,研究建立了可同时检测鉴别这2种原虫的二重PCR。对同一样品中的单孢子虫和折光马尔太虫模板DNA进行扩增,得到2条大小与试验设计相符的244 bp(单孢子虫)和478 bp(折光马尔太虫)的特异性扩增带,而对派琴虫、嗜水气单胞菌、荧光假单胞菌、副溶血弧菌、溶藻弧菌、河弧菌和拟态弧菌等病原体的检测,结果均为阴性。敏感性试验表明,该技术最低能检测到10 pg的单孢子虫和折光马尔太虫DNA。 相似文献
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根据基因库中派琴虫和单孢子虫基因组的保守序列,设计了2对特异性引物和2条用不同荧光基团标记的TaqMan探针。对反应条件和试剂浓度进行优化,建立能够同时检测派琴虫和单孢子虫的二重荧光定量PCR方法。该方法特异性好,对派琴虫和单孢子虫的检测敏感性分别达到400和40个模板拷贝数;此外抗干扰能力强,对派琴虫和单孢子虫不同模板浓度进行组合,仍可有效地同时检测这2个原虫。对广西沿海的49份贻贝病料进行检测,结果派琴虫阳性率为16.3%,检测的派琴虫含量为2.38×106～9.21×102拷贝/μL;提示派琴虫广泛存在于中国南方沿海的养殖贝类中,建立的荧光定量PCR方法可以用于贝类派琴虫的临床快速检测。该方法对单孢子虫检测的敏感性比派琴虫高,而49份贻贝病料未检出单孢子虫,提示需要进行更多临床样品的检测。 相似文献
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《中国预防兽医学报》2020,(7)
为了准确快速检测猪源肉孢子虫的种类,本研究根据米氏肉孢子虫和猪人肉孢子虫的18S rRNA基因序列设计双重套式PCR引物,优化并建立能够同时检测这两种猪源肉孢子虫的双重套式PCR方法。结果显示,双重套式PCR对米氏肉孢子虫和猪人肉孢子虫扩增产物的大小分别为415 bp和591 bp,而对枯氏肉孢子虫、刚地弓形虫、犬新孢子虫的检测结果均为阴性,对两种猪源肉孢子虫重组质粒标准品的检测下限均为5拷贝/μL,表明该双重套式PCR具有较强的特异性和较高的敏感性。利用本研究建立的方法随机对22份猪肉样品的检测结果显示,本研究建立的方法与肌肉压片镜检法的阳性符合率为100%,阴性符合率为89.5%,总符合率为90.9%,本研究建立的双重套式PCR方法可以实现对猪肉样品中米氏肉孢子虫和猪人肉孢子虫的快速检测。 相似文献
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FENG Bin XIE Zhi-xun ZHANG Yan-fang HUANG Jiao-ling WANG Sheng FAN Qing HUANG Li XIE Li-ji ZENG Ting-ting LUO Si-si DENG Xian-wen XIE Zhi-qin LIU Jia-bo SONG Zhong-bao LIN Er-ke 《中国畜牧兽医》2017,44(5):1295-1301
In order to set up and optimize a semi-nested PCR for rapid detection of chicken parvovirus (ChPV), three specific primers were designed according to conserved sequences of NS 1 gene of ChPV. The specificity and sensitivity of ChPV semi-nested PCR were tested, and the assay was applied to detect 48 clinical samples. The specificity and sensitivity tests showed that this semi-nested PCR was only sensitive to ChPV for amplifying specific band of 186 bp and it could detect 5.62 fg/μL of ChPV DNA, without any sensitivity to other viruses, such as Newcastle disease virus, H9 subtype avian influenza virus, Marek's disease virus, infectious laryngotracheitis virus and infectious bronchitis virus. 48 chicken samples were detected and the positive rate was 16.67% (8/48). The results of our study demonstrated that the optimized semi-nested PCR could be a method that was suitable for clinical detection of ChPV. 相似文献
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为建立一种快速、特异、灵敏的检测鸡细小病毒（chicken parvovirus,ChPV）的方法,根据ChPV的保守基因NS1设计了3条特异性引物,建立并优化了能快速检测ChPV的半巢式PCR方法,对其进行特异性和敏感性试验,并用所建立的方法对48份临床样品进行了检测。特异性和敏感性试验结果显示,建立的半巢式PCR只对ChPV敏感,扩增产物为186 bp的特异性条带;其最低能检测到5.62 fg/μL的ChPV DNA;而对鸡新城疫病毒、H9亚型禽流感病毒、马立克氏病病毒、鸡传染性喉气管炎病毒、鸡传染性支气管炎病毒不敏感。临床检测结果显示,同时对48份临床样品进行检测,检出率为16.67%（8/48）,提示广西区内鸡群存在ChPV感染。本研究建立的ChPV半巢式PCR方法适用于ChPV的临床检测。 相似文献
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Anzai T Eguchi M Sekizaki T Kamada M Yamamoto K Okuda T 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》1999,61(12):1287-1292
In order to establish a rapid diagnostic method for contagious equine metritis (CEM), we developed and evaluated a polymerase chain reaction (PCR) test. Species-specific PCR primer sets were derived from the DNA sequence of a cloned DNA fragment of Taylorella equigenitalis that did not hybridize with the genome of a taxomonically related species, Oligella urethralis. Single step PCR with primer set P1-N2 and two-step semi-nested PCR with primer sets P1-N2 and P2-N2 detected as low as 100 and 10 CFU of the bacteria, respectively. Single-step PCR detected T. equigenitalis from genital swabs of experimentally infected mares with sensitivity comparable to that of bacterial isolation. Furthermore, two-step PCR was more sensitive than the culture method. Upon examination of field samples, 12 out of 3,123 samples were positive by single-step PCR while only 2 were positive by bacterial culture. The 12 PCR-positive samples originated from 5 mares, of which 3 animals were considered to be carriers based on previous bacteriologic and serologic diagnoses for CEM. The PCR test described in this study would provide a specific and highly sensitive tool for the rapid diagnosis of CEM. 相似文献
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Liu Q Zhou YQ Zhou DN Liu EY Du K Chen SG Yao BA Zhao JL 《Veterinary parasitology》2007,143(3-4):260-266
Babesiosis has recently been recognized as an emerging infectious disease of buffalo in China. In order to investigate the epidemiology and enzootic potential of this parasite in Hubei province, we sought to develop a semi-nested PCR to detect Babesia orientalis in buffalo and the potential tick vector-Rhipicephalus haemaphysaloides by amplifying a specific 257bp fragment of B. orientalis 18S rRNA gene. The practical limit of detection showed that it had high sensitivity and an approximate parasitemia of 0.00000012% was detected by the PCR system. The blood samples of 121 asymptomatic buffaloes collected from four babesia endemic counties and that of 71 asymptomatic buffaloes collected from three babesia free counties in Hubei province of China were examined for the presence of B. orientalis using both Wright-Giemsa stained blood smear and semi-nested PCR. Microscopic examination revealed that 5/121 animals were positive, whereas 24/121 animals were positive by the semi-nested PCR assay. Of 378 ticks (R. haemaphysaloides) collected from buffaloes and examined by the semi-nested PCR, 35 were positive. The results showed that the semi-nested PCR was a useful method to investigate the epidemiology of buffalo babesiosis (B. orientalis), which is widely distributed in Hubei province, China. 相似文献
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Traversa D Iorio R Capelli G Paoletti B Bartolini R Otranto D Giangaspero A 《Veterinary parasitology》2006,141(3-4):285-290
Gastric habronemosis of horses caused by Habronema microstoma and Habronema muscae (Nematoda, Spirurida) is characterized by catarrhal gastritis, diarrhoea, progressive weight loss and ulcers. Despite its importance in the equine industry and in clinical practice, knowledge of the epidemiology of this infection is still incomplete as diagnosis in live animals is challenging. A two-step semi-nested PCR assay using ribosomal DNA (rDNA) markers has recently been used for the molecular diagnosis in vivo of gastric habronemosis based on the detection of H. microstoma and/or H. muscae DNA in equine faeces. To evaluate the field efficacy of this assay, a molecular epidemiological survey was carried out on equid gastric habronemosis in central Italy. One hundred and fifty-three individual faecal samples were collected from live native horses and subjected to both coprological examination and the two-step semi-nested PCR. When flotation procedures were performed no horse tested positive for Habronema spp. larvated eggs while 96 animals (61.2%) were positive for other endoparasites (i.e. strongyles, oxyurids, ascarids). Two-step semi-nested PCR detected 86 samples (53.6%) that were positive for H. microstoma and/or H. muscae DNA. H. microstoma prevalences showed statistically significant differences; the highest prevalence was observed in horses infected by other gastrointestinal parasites and concomitantly by H. muscae. No statistical differences were found between the prevalence of Habronema spp. infection and sex, age, breeding management, and antiparasitic treatments. This field survey provided further information on habronemosis and its epidemiology. 相似文献