共查询到19条相似文献，搜索用时 31 毫秒
1.
《黑龙江畜牧兽医》2017,(24)
为了解新疆南疆牛隐孢子虫病的感染情况,从而为该病的防控提供理论依据,以新疆南疆某牛场牛粪中的隐孢子虫卵囊DNA为模板,根据隐孢子虫18S rRNA序列设计引物,采用巢式PCR方法鉴定了自然感染的新疆南疆牛源隐孢子虫,并对扩增出的目的片段进行了测序、同源性分析,并运用MEGA 5.0软件构建系统发育进化树。结果表明:检测材料能够扩增出目的片段;新疆南疆牛源隐孢子虫分离株的18S rRNA与广州微小隐孢子虫的同源性达100%,种系发育亲缘关系最近,处于同一分支,与宁夏、河南、黑龙江等地微小隐孢子虫的同源性达99%。说明新疆南疆牛源隐孢子虫分离株在种属上为微小隐孢子虫。 相似文献
2.
为了调查内蒙古部分地区规模化牛场奶牛隐孢子虫的感染情况及其虫种类型,试验在4个牛场采集了295份奶牛的粪样,从粪便样品中直接提取DNA进行套式PCR法检测,之后将其目的片段克隆至p GM-T载体上进行测序和同源性分析以鉴定虫种。结果表明:可通过套式PCR法从阳性粪便的DNA抽提物中扩增出目的条带,大小分别为800 bp和505 bp;对测得的序列和NCBI上已发表的安氏隐孢子虫(C.andersoni)18S rRNA基因序列进行BLAST比对分析,相似度为100%;采集样品的阳性率为14.9%(44/295)。说明套式PCR法可用于检测奶牛粪便样品中的隐孢子虫,且在一定程度上能够很好地反映出奶牛隐孢子虫的感染情况,并能有效鉴别其虫种。 相似文献
3.
《中国兽医学报》2020,(7)
为了解宁夏地区犊牛隐孢子虫的感染情况,从3个市8个规模化奶牛场采集272份犊牛粪便样品,利用巢氏PCR技术对18S rRNA基因位点进行检测和分析。结果显示,隐孢子虫的总感染率为12.88%,银川市隐孢子虫感染率为16.89%,吴忠市隐孢子虫感染率为6.94%,石嘴山市隐孢子虫感染率为9.62%,三者差异不显著(P0.05),断奶前、后感染率分别为14.14%,12.14%。序列处理分析发现3种隐孢子虫,分别为牛隐孢子虫(Cryptosporidium bovis,C.bovis)、瑞氏隐孢子虫(Cryptosporidium ryanae,C.ryanae)和微小隐孢子虫(Cryptosporidium parvum,C.parvum),其中C.bovis分离率最高(54.29%)。研究表明这些地区犊牛隐孢子虫感染比较普遍,且感染的虫种有3种,其为深入了解宁夏部分地区隐孢子虫的分子流行情况提供了参考数据。 相似文献
4.
利用18S rRNA巢式聚合酶链反应(Nested PCR)-限制片段长度多态性(Restriction fragment length polymorphism,RFLP)鉴定吉林、大庆地区牛源隐孢子虫分离株.采取吉林、大庆地区断奶前犊牛粪便,提取DNA后经18S rRNA基因巢式PCR扩增,扩增产物测序后用Blast和MEGA4.0软件进行同源性和系统发育树分析.同时扩增产物分别用Ssp Ⅰ、Vsp Ⅰ和Mbo Ⅱ酶切后进行RFLP分析.通过18S rRNA基因PCR-RFLP分析和测序比对分析表明,吉林分离株包括2种隐孢子虫,分别为C.bovis和C.ryanae,大庆分离株包括3种,分别为C.boris、C.ryanae和C.andersoni. 相似文献
5.
旨在调查青海省大通县部分地区世居牦牛犊隐孢子虫的感染情况及其虫种类型。在大通县宝库乡和良教乡采集了200份3~5月龄世居牦牛犊粪样进行隐孢子虫检测。所有样品经蔗糖密度梯度离心法纯化处理,采用免疫荧光试验（IFT）方法进行检测,阳性样品再用套式PCR扩增18S rDNA,并进行测序和同源性分析以供虫种鉴定。结果表明：免疫荧光试验（IFT）方法镜检出3份隐孢子虫阳性样品,阳性率为1.5%（3/200）;阳性样品经套式PCR扩增18S rDNA后,有2份隐孢子虫样品呈阳性,扩增产物长度为500 bp,测序后将序列命名为QHDTC201901和QHDTC201902;系统发育分析显示,种类鉴定发现2种隐孢子虫,分别为安氏隐孢子虫（Cryptosporidium andersoni）和牛隐孢子虫（Cryptosporidium bovis）,总感染率为1.0%（2/200）。综上提示,大通县部分地区牦牛犊存在隐孢子虫感染,感染虫种为安氏隐孢子虫和牛隐孢子虫。该调查研究为该地区牛隐孢子虫病的防控提供了临床基本数据。 相似文献
6.
《中国兽医学报》2019,(7):1325-1329
本研究从河北省奶牛场有腹泻症状2月龄左右的犊牛粪便中分离卵囊,进行病原分离与虫株鉴定。采集腹泻犊牛的新鲜粪便24份,采用饱和蔗糖溶液漂浮法和抗酸染色法检测隐孢子虫卵囊,观察卵囊形态、大小。提取卵囊基因组DNA,进行18S rRNA基因PCR扩增及琼脂糖凝胶电泳检测。对扩增片段进行序列测定及分析,进一步确定分离虫株隐孢子虫的种类/基因型,根据18S rRNA基因核苷酸序列构建系统发育进化树,确定虫株亲缘关系。结果显示,5份样品检出隐孢子虫卵囊,感染率为20.83%。形态学观察卵囊呈长圆形或椭圆形,大小为(5.0～8.2)μm×(4.2～6.3)μm,平均大小为6.6μm×5.3μm,卵囊指数为1.24,鉴定分离虫株为安氏隐孢子虫。PCR扩增出预期大小为1 188 bp的特异性片段,序列分析和同源性分析结果表明,分离株与安氏隐孢子虫AB089285.2株、AB513856.1株、AY954885.1株的同源性为98.7%～98.8%,进一步表明分离的隐孢子虫虫株为安氏隐孢子虫。在种系进化关系上,分离株与安氏隐孢子虫AB513856.1株亲缘关系最近。本研究为揭示河北省奶牛隐孢子虫病的流行特征,实施有效防制措施提供了科学依据。 相似文献
7.
隐孢子虫（Cryptosporidium）病毒的鉴定及其特性 总被引：3，自引：0，他引：3
根据已发表的隐孢子虫病毒的序列,设计合成2对引物,对小球隐孢子虫(Cryptosporidiumparvum)、鼠隐孢子虫(C.muris)、贝氏隐孢子虫(C.baileyi)、火鸡隐孢子虫(C.meleagridis)进行RT-PCR扩增,结果发现仅小球隐孢子虫(C.parvum)含有大小约为1.7×103nt和1.3×103nt2个片段的dsRNA病毒.将其PCR产物连接到pMD18-T载体上进行克隆测序,经与GenBank比较,含这2个片段的dsRNA病毒与已发表的该虫病毒的同源性分别为96%和98%.电泳鉴定发现,该病毒对低浓度RNA酶不敏感,且不能被DNA酶降解.依赖RNA的RNA聚合酶活性测定结果表明,该病毒具有该聚合酶的活性.电镜观察未发现存在病毒样粒子. 相似文献
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为快速检测并准确鉴别奶牛隐孢子虫种,以隐孢子虫18S rRNA基因的特殊区域为基础,设计内、外引物,并根据软件分析确定相应的内切酶EcoT141,采用Nested PCR-RFLP方法进行虫种种型鉴别分析。在Nested PCR两次PCR反应中,以微小隐孢子虫（Cryptos poridium parvum,C．p）和安氏隐孢子虫（Cryptosporidium andersoni,C．an）卵囊提取的DNA为模板,均能扩增出长约800bp和500bp的明亮条带,且特异性强,其他虫种不能扩增出条带,该方法最低可检测到5个卵囊／g粪便;对于由内引物扩增出的500bp的条带,C.an的PCR产物能被内切酶EcoT141酶切,酶切后的片段分别为416bp和92bp,C.p的PCR产物不能被此酶酶切。用所建立的Nested PCR-RFLP法对上海奶牛389头和进口奶牛200头的共计589份粪样进行检测,Nested PCR的结果表明上海奶牛和进口奶牛的隐孢子虫阳性率分别为19．02％和3．5％,RFLP的结果表明上海奶牛感染的主要是Cp和C．an,进口奶牛感染的主要是C．p。研究结果表明,本研究建立的检测奶牛粪便中的隐孢子虫的NestedPCR-RFLP法,可用于奶牛隐孢子虫流行病学调查并有效鉴别奶牛隐孢子虫种。 相似文献
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《黑龙江畜牧兽医》2017,(15)
为了解保定地区奶牛源隐孢子虫感染情况,从当地3个奶牛场随机采集145份奶牛粪便经饱和蔗糖溶液漂浮后直接镜检和抗酸染色后镜检,阳性样品采用PCR方法扩增18S rRNA基因,同时将扩增出的目的片段进行克隆和序列分析,并将分离株与其他11个隐孢子虫参考株的18S rRNA序列进行比对和遗传距离比较。结果表明:有10份粪便样本为隐孢子虫阳性,感染率为6.9%(10/145),不同奶牛场、年龄段奶牛隐孢子虫感染率有显著性差异(P0.05)。10份粪便样品采用PCR方法扩增后有7份为18S rRNA基因阳性,扩增出的18S rRNA部分基因片段长528 bp。保定地区隐孢子虫分离株扩增的基因序列与牛源隐孢子虫18S rRNA基因序列(Gen Bank登录号为HQ179571)同源性最高,确定保定地区分离到的奶牛源隐孢子虫为牛隐孢子虫。 相似文献
10.
青海省贵南县某牧场发生犊牦牛腹泻疾病,为快速确诊发病犊牦牛腹泻的致病原因,及时防控和治疗,采集犊牦牛腹泻样品15份,利用形态学方法和分子生物学方法进行鉴定与分析。结果显示:引发该牧场犊牦牛腹泻的病原是隐孢子虫(Cryptosporidium)和邱氏艾美耳球虫(Eimeria zurnii,E.zurnii)、牛艾美耳球虫(Eimeria bovi,E.bovi)、椭圆艾美耳球虫(Eimeria ellipsoidalis,E.ellipsoidalis)的混合感染,测序结果显示,瑞氏隐孢子虫(Cryptosporidium ryanae,C.ryanae)的18S rRNA基因与参考序列中国株CP031554/3/2/1同源性在99%以上,各个种球虫与引用参考序列的同源性均在98%以上。同时,遗传进化树显示:本次检测的C.ryanae与中国株C.ryanae 18S rRNA基因同源性关系近,聚成一大支;三种球虫分别与其相同种聚集在一支上。结果表明,该牧场犊牛腹泻是由隐孢子虫和球虫的混合感染造成的,该研究为犊牛腹泻的病原学研究和流行病学调查提供了参考数据,为寄生虫性病原的对症治疗、对因治疗和辅助支持治疗提供了帮助。 相似文献
11.
Natural infection with zoonotic subtype of Cryptosporidium parvum in Capybara (Hydrochoerus hydrochaeris) from Brazil 总被引：1，自引：0，他引：1
A total of 145 capybara (Hydrochoerus hydrochaeris) fecal samples from the state of S?o Paulo, Brazil, were screened for Cryptosporidium spp. oocysts using the malachite green method. Eight samples (5.52%) showed positive results and were further submitted to nested PCR reaction for amplification of fragments of 18S rRNA gene and 60-kDa glycoprotein gene for determination of species, alleles and subtypes of Cryptosporidium. Sequencing of the PCR products of the 18S rRNA gene fragments and 60-kDa glycoprotein gene fragments showed that for both genes all Cryptosporidium isolates from capybara were respectively 100% genetically similar to a bovine isolate of C. parvum and to C. parvum subtype IIaA15G2R1. To the best of our knowledge this is the first report of Cryptosporidium infection in this rodent. The finding of zoonotic C. parvum infection in a semi-aquatic mammal that inhabits anthroponotic habitats raises the concern that human water supplies may be contaminated with zoonotic Cryptosporidium oocysts from wildlife. 相似文献
12.
Starkey SR Zeigler PE Wade SE Schaaf SL Mohammed HO 《Journal of the American Veterinary Medical Association》2006,229(10):1623-1626
OBJECTIVE: To isolate and speciate Cryptosporidium DNA from fecal samples obtained from dairy cattle in New York State and identify factors associated with whether cattle were shedding Cryptosporidium parvum versus Cryptosporidium bovis. DESIGN: Cross-sectional study. SAMPLE POPULATION: 115 fecal samples positive for DNA coding for the Cryptosporidium 18S rRNA gene from dairy cattle in New York State. PROCEDURES: A PCR assay was used to amplify DNA from fecal samples; amplification products were submitted for bidirectional DNA sequencing. Logistic regression was used to test for associations between various host factors and Cryptosporidium spp. RESULTS: 70 of the 115 (61%) fecal samples were found to have C parvum DNA, 42 (37%) were determined to have C bovis DNA, and 3 (3%) were found to have C parvum deer-type DNA. The presence of diarrhea at the time of fecal sample collection, oocyst count, and breed were associated with whether cattle were infected with C parvum or C bovis, with animals more likely to be infected with C parvum if they had diarrhea, had a high oocyst count, or were Holsteins. CONCLUSIONS AND CLINICAL RELEVANCE: Results suggest that C parvum and C bovis can be isolated from dairy cattle in New York State and that various factors affect whether cattle infected with Cryptosporidium spp are infected with C parvum or C bovis. Findings also lend credence to the theory that C bovis may be more host adapted and thus less pathogenic to dairy cattle than C parvum. 相似文献
13.
Bakheit MA Torra D Palomino LA Thekisoe OM Mbati PA Ongerth J Karanis P 《Veterinary parasitology》2008,158(1-2):11-22
Three LAMP (loop-mediated isothermal DNA amplification) assays were applied to detect Cryptosporidium species DNA in a total number of 270 fecal samples originating from cattle, sheep and horses in South Africa. DNA was extracted from 0.5 g of fecal material. Results of LAMP detection were compared to those obtained by nested PCR targeting the Cryptosporidium 18 small subunit rRNA (18S) gene. All samples were negative by nested PCR, while up to one-third of samples were positive by LAMP assays. The SAM-1 LAMP assay, shown to detect C. parvum, C. hominis and C. meleagridis, amplified Cryptosporidium DNA in 36 of 107 cattle (33.64%), in 26 of 85 sheep (30.5%) and in 17 of 78 horses (21.79%). The HSP LAMP specific to C. muris and C. andersoni, amplified Cryptosporidium DNA in one cow (0.9%), five sheep (5.8%) and seven horses (8.9%). The gp60 LAMP assay, shown to detect C. parvum produced no amplified Cryptosporidium DNA, likely due to low sample DNA concentrations. The specificity of LAMP assays was confirmed by sequencing of the LAMP products generated in positive samples. Sequence products from the three LAMP assays showed high identity to the target gene sequences confirming the specificity of LAMP. In this study, the LAMP procedure was clearly superior to nested PCR in the detection of Cryptosporidium species DNA. Use of LAMP is proposed as an efficient and effective tool for epidemiologic survey studies including screening of healthy animals in which Cryptosporidium oocyst shedding is characteristically low and likely below the detection limit of PCR in conventional sample concentrates. 相似文献
14.
Cheun HI Choi TK Chung GT Cho SH Lee YH Kimata I Kim TS 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2007,69(10):1099-1101
To investigate Cryptosporidium infection among healthy people, we collected stool samples from 150 healthy individuals in Gokseong, Muan, and Imshil Counties, southwest Korea, where neighbors on both an animal farm and a river respectively. In 12 of 150 samples, Cryptosporidium oocysts were detected by means of modified acid-fast staining. The bovine genotype, Cryptosporidium parvum, was identified by PCR/RFLP and 18S rRNA sequencing. C. parvum existed endemically in these areas, and the residents showed a relatively higher infection rate for C. parvum than that for C. hominis. Our results indicate that countermeasures against Cryptosporidium infection must be taken in these areas to ensure human health. 相似文献
15.
Nydam DV Lindergard G Santucci F Schaaf SL Wade SE Mohammed HO 《American journal of veterinary research》2005,66(3):413-417
OBJECTIVE: To determine the risk posed by Cryptosporidium parvum and Cryptosporidium hominis from dairy cattle in the New York City watershed (NYCW). SAMPLE POPULATION: Samples from cattle at risk for shedding Cryptosporidium organisms on randomly selected dairy farms in the NYCW. PROCEDURE: Feces were collected for 4 years from calves at risk for infection on 37 dairies. Oocysts were detected by use of centrifugation concentration-flotation microscopy. The DNA was directly isolated from fecal samples and used to amplify fragments of the small subunit ribosomal RNA and thrombospondin-related adhesion protein C-2 genes by use of nested polymerase chain reaction assays. Small subunit ribosomal RNA fragments were restriction digested by the enzyme Vspl and thrombospondin-related adhesion protein C-2 fragments were digested by Eco91l to distinguish between C hominis (formerly known as genotype 1) and C parvum (formerly known as genotype 2). RESULTS: Of 437 fecal samples examined, 214 contained oocysts. Amplicons were generated for 200 samples. We can be certain, with 95% confidence, that cattle in the NYCW did not harbor C hominis. CONCLUSIONS AND CLINICAL RELEVANCE: Cryptosporidium infections in cattle are under examination because of the potential contamination of public waters by manure. Although cattle may be the source of zoonotic infection via C parvum, they pose little risk for C hominis (the strain commonly isolated from humans in waterborne outbreaks of disease). Other sources of oocysts should be considered when investigating outbreaks attributable to contaminated urban drinking water because cattle pose only a small risk via shedding of C hominis. 相似文献
16.
Dung samples were collected from dairy calves of south Indian states viz., Andhra Pradesh, Karnataka, Kerala, Tamil Nadu and union territory, Puducherry and are subjected to nested polymerase chain reaction (PCR) targeting 18S rRNA gene for detection of Cryptosporidium infection. Of the 459 dung samples screened 182 were found positive with a prevalence of 39.65%. Highest prevalence of Cryptosporidium was observed in Puducherry (86.67%) and lowest in Kerala (17.65%). Genotyping by PCR-restriction fragment length polymorphism (RFLP) and sequence analysis revealed the presence of all the four major Cryptosporidium species of cattle viz., Cryptosporidium andersoni, Cryptosporidium ryanae, Cryptosporidium parvum and Cryptosporidium bovis. C. andersoni was widely distributed in calves of Tamil Nadu, Karnataka and Puducherry whereas in Andhra Pradesh C. ryanae was the major species. Of the 64 samples subjected to PCR-RFLP, 39 (60.94%) could be classified as C. andersoni, 18 (28.13%) as C. ryanae, 4 (6.25%) as C. parvum and 3 (4.69%) were confirmed as C. bovis. The results were also confirmed by sequencing of 19 Cryptosporidium DNA samples. 相似文献
17.
以隐孢子虫(Cryptosporidium spp.)18S rRNA为靶基因,通过巢氏PCR检测发现在采集的101份新鲜粪便样品中18份样本为阳性。不同地区羊场的隐孢子虫感染率分别为：李集镇36%(18/50),新安镇0%(0/30)、堆沟港镇0%(0/21)未检出隐孢子虫。但通过对4羊场的分析发现,有2个羊场(50%)为隐孢子虫感染阳性,且不同的羊场感染率差异显著,因此单纯的以地区来评价隐孢子虫的感染率,是值得商榷的。山羊隐孢子虫的感染率为33.3%,湖羊隐孢子虫的感染率为2%。2～6月龄的育肥羊隐孢子虫的感染率为36%,6～10月龄的育成羊(0%)。对检测为阳性的样品进行了隐孢子虫18S rRNA基因片段序列分析,发现18个样品全部为肖氏隐孢子虫(Cryptosporidium xiaoi),不存在泛在隐孢子虫(Cryptosporidium ubiquitum)。在检测隐孢子虫感染阳性的1个山羊场和1个羊湖羊场均存在肖氏隐孢子虫感染,不存在泛在隐孢子虫,更未发现肖氏隐孢子虫和泛在隐孢子虫的混合感染。目前的数据提示肖氏隐孢子虫对2～6月龄山羊(33.3%)和湖羊(2%)具有更高的... 相似文献
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Diarrheic fecal samples from 258 pre-weaned calves (1-30 day-old) from 9 dairy farms located in Banat region, Romania, were microscopically examined for the presence of Cryptosporidium oocysts. Overall, 65 (25%) samples were found positive. A higher percent of infection was recorded in calves aged between 8 and 14 days compared with other age categories (1-7, 8-14, 15-21 and 22-30 days; p<0.05). Genetic characterization was carried out on all Cryptosporidium-positive samples. After DNA extraction, Cryptosporidium species were determined by a nested PCR of the small subunit rRNA gene (18S) followed by RFLP analysis with SspI, VspI and MboII restriction enzymes. The restriction patterns showed that animals were infected with Cryptosporidium parvum. Subsequently, subtyping of 13 C. parvum isolates, based on sequence analysis of the 60 kDa glycoprotein (GP60) gene, showed 2 subtypes (IIaA15G2R1 and IIaA16G1R1) belonging to the subtype family IIa. This is the first molecular study of bovine Cryptosporidium infection in Romania. 相似文献