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1.
为探讨DNA序列标记技术在坛紫菜种质鉴定中的应用,对10个野生坛紫菜种质材料的5.8S rDNA-ITS区进行PCR扩增和序列分析,结果发现扩增的片段长度在1 208~1 219 bp之间,可以分为ITS1区,5.8S区和ITS2区3个部分,其中5.8S区片段的长度完全一致,均为160 bp;ITS1区和ITS2区片段的长度也非常接近,只有几个碱基的差异。多重序列比对发现10个种质材料的ITS区（包括ITS1和ITS2）序列都存在一定差异,序列同源性在95.82％~99.73％之间,而5.8S区序列则完全一致,但与其它种紫菜的5.8S区序列有很大差异,序列同源性在79.7％~95.0％之间。由此认为5.8S rDNA-ITS区这种高度保守区和高变区交替排列的形式可以成为坛紫菜种质鉴定及系统进化分析的强有力工具。  相似文献   

2.
To select a reliable and sensitive method for discriminating strains of Porphyra haitanensis, the nucleotide sequence of the internal transcribed spacer 1 to internal transcribed spacer 2 regions (ITS-5.8S) of nuclear ribosomal DNA and the intergenic spacer region of RUBISCO were compared in five wild and five cultivated Porphyra haitanensis strains. Based on molecular analyses, sequences of ITS-5.8S (about 1,210 bp) could be divided into three regions: ITS1, 5.8S, and ITS2. The ITS1 and ITS2 sequences of each strain differed, even between individuals collected from the same site. In contrast, 5.8S rDNA and RUBISCO spacer sequences were identical among the ten P. haitanensis strains, although differences were found among different Porphyra species. Phylogenetic analysis also supported these conclusions. These sequence features of highly conserved regions and diversified regions that occurred repeatedly in ITS-5.8S could be useful in discriminating germplasm of P. haitanensis strains or Porphyra species. In contrast, the RUBISCO spacer is only suitable for identifying Porphyra species. New coupled primers were designed to amplify only the 5.8S rDNA and ITS2 region of Porphyra. The sequences of these amplified fragments can be readily used to identify germplasm or to perform phylogenetic analysis of Porphyra spp.  相似文献   

3.
核糖体基因为串联重复多拷贝的基因,包括3个编码基因(18S,5.8S,28S)和两个间隔区ITS1(internal transcribed spacer 1)和ITS2(internal transcribed spacer 2)。目前,对核糖体基因的相关报道主要集中在个体内不同拷贝间的多态特征,以及其作为分子标记在系统演化关系中的应用,GC含量作为一项非常重要的核苷酸序列指标,而鲜有报道。为了探讨鱼类的核糖体基因GC含量特征以及间隔区是否也存在GC平衡现象,本研究选择了鲈形目(Perciformes)5科11种鱼类5个片段的核糖体基因进行研究,包括尖吻鲈科(Latidae)、射水鱼科(Toxotidae)、军曹鱼科(Rachycentridae)、剑鱼科(Xiphiidae)、鲹科(Carangidae)。获得了1651个单克隆序列,通过分析并比较已有的其他硬骨鱼序列片段的GC含量变化特征,结果发现:本研究鱼类的18S的GC含量为52.6%~57.1%(平均54.6%),5.8S为55.6%~58.9%(平均57.4%),28S为64.2%~65.8%(平均64.6%),ITS1为56.5%~73.0%(平均65.0%),ITS2为62.3%~77.5%(平均69.1%)。编码区的GC含量相对较保守,变异范围较小,18S和5.8S变化范围明显小于间隔区,28S则位于间隔区的最低值和最高值之间。因此,我们发现硬骨鱼核糖体ITS高于60%的GC含量是该类群的一个特征,并且高GC含量的ITS1和ITS2序列中不存在明显的高GC富集区,其含量高低的变化与序列长度也没有相关性。本研究11种鱼类的ITS1和ITS2的GC含量在种内的相似性既有大于也有小于种间相同片段的相似性,因此GC平衡现象只存在部分种类中。本研究结果可为鱼类核糖体基因序列特征的进一步研究及利用提供科学依据。  相似文献   

4.
珠母贝属6个种的ITS 2分子标记研究   总被引：6，自引：3，他引：6  
对珠母贝属的大珠母贝、珠母贝、白珠母贝、黑珠母贝、长耳珠母贝、黑珠母贝和合浦珠母贝6个种的内部转录间隔区2(ITS2)序列及其两侧的5.8S和28S的部分序列进行了比较分析。其中黑珠母贝的序列来自GenBank。PCR扩增片段大小为600bp左右,测序结果表明,ITS2长211～254bp,两端的5.8S和28S分别长84bp和272bp(均含引物)。序列比对分析结果表明,5.8S和28S序列高度保守,不适合于种类鉴定,而ITS2序列高度变异,270个比对位点中有146个位点发生突变,其中72个位点发生插入/缺失突变。除白珠母贝和黑珠母贝之间的遗传距离较小外,其余种类之间的遗传距离远远大于种内遗传距离。基因型分析表明,每个种具有各自特有的基因型。基因型和序列变异分析表明ITS2序列可作为珍珠贝种类鉴定的分子标记。可用于种间、杂交育种、幼体和珍珠贝肉等材料的种类鉴定与遗传分析。  相似文献   

5.
This report describes Exophiala infection in cultured striped jack, Pseudocaranx dentex , in Japan in 2005. One hundred out of 35 000 fish died per day and mortalities continued for 1 month. Diseased fish showed swelling of the abdomen and kidney distension. Numerous septate hyphae, pale brown in colour, were seen in kidney in squash preparations. Histology revealed abundant fungal hyphae and conidia in gill, heart and kidney. Fungal hyphae were accompanied by cell necrosis and influx of inflammatory, mainly mononuclear cells. The fungus isolated from the diseased fish had septate hyphae, pale brown in colour and 1.8–3.0 μm in diameter. Conidiogenous cells were conspicuous annellides, short or cylindrical or fusiform in shape. Conidia were one-celled, ellipsoidal with smooth walls, accumulated in balls at the apices of annellides that tended to slide down, 1.5–2.0 μm in width and 3.0–5.0 μm in length. The fungus was classified into the genus Exophiala based on its morphology and as Exophiala xenobiotica based on the sequences of the ITS 1–5.8S–ITS 2 regions of rDNA. This is the first record of this fungus in a marine fish.  相似文献   

6.
Abstract:   Sequence analyses of mitochondrial (mt) and nuclear genes were performed for genetic comparison between two Takifugu pufferfish species: torafugu T. rubripes and karasu T.  chinensis . With a sequence coverage of 20% in mtDNA, 640, 308, 344, 522 and 697 bp encoding mt 16S ribosomal RNA (rRNA), adenosine triphosphatase 6 ( ATPase 6 ), nicotinamide adenine dinucleotide dehydrogenase subunit 4 ( ND4 ), ND5 and cytochrome b (cyt b ), respectively, among 24 wild torafugu, 24 wild karasu and six hybrid-like samples, 15% of the torafugu identified by external color patterns showed nucleotide sequences consistent with karasu. Meanwhile, sequences of 60% karasu were consistent with those registered for torafugu (AJ421455). As for the hybrid-like samples, two possessed karasu-specific sequences in some base positions while torafugu-specific sequences in others. The remaining hybrid-like samples possessed torafugu-specific sequences. On the other hand, the mt control region did not show such type of consistency. Analysis of nuclear melanocortin receptor genes ( MC1R , MC4R ) among 54 samples showed 99–100% inter- and intraspecific sequence identity. Partial nuclear 18S  rRNA, complete internal transcribed spacer 1 ( ITS1 ), partial 5.8S  rRNA and ITS2 genes showed similar levels of identity, indicating a very low level of variation in their respective gene fragments between the two Takifugu species.  相似文献   

7.
ABSTRACT:   Of the free, conjugated and bound forms of polyamines, the free form of spermidine was the most abundant polyamine in Heterosigma akashiwo throughout the growth period except for the lag phase. Free spermidine content increased remarkably during the exponential growth phase and increased as the growth rate increased. The maximum growth yield of H. akashiwo was reduced by the addition of methylglyoxal bis-guanylhydrazone (MGBG) and the reduced growth yield could be counteracted by the addition of spermidine to the medium. It is concluded that spermidine plays a significant role in the growth of H. akashiwo . These results are similar to those obtained in Chattonella antiqua that belongs to same taxonomic Class as H. akashiwo .  相似文献   

8.
罗非鱼种间,尤其是尼罗罗非鱼与杂种尼奥罗非鱼之间,很难区分。本文对尼罗罗非鱼、奥利亚罗非鱼、莫桑比克罗非鱼和杂交种尼奥罗非鱼（尼罗罗非鱼♀×奥利亚罗非鱼♂）和红罗非鱼的核糖体DNA内部转录间隔子1（ITS1）序列及其两侧的18S和5．8s部分序列特征进行分析,以筛选种间鉴别标记。PCR扩增产物大小约700bp,测序结果表明,（去除引物后）18S长146bp,5．8S长66bp,不同种类之间无差异;ITS1长383-483bp,因种类不同而异,其GC含量大于AT含量,达到67．1％。序列比对分析结果表明,18S和5．8s片段高度保守,但各有3个变异位点可以把上述几个种和杂种相互区分开;18S序列上有一个UnbI限制性酶切位点,可作为尼罗和尼奥罗非鱼的鉴别标记。ITS1序列种间变异大,系统发育分析表明,所研究的5个种聚成2个类群,尼罗与尼奥罗非鱼为一组,莫桑比克-红罗非鱼-奥利亚罗非鱼为另一组。组内种间遗传距离较小,尼罗和尼奥罗非鱼的种间遗传距离为0．006;莫桑比克、奥利亚和红罗非鱼的种间遗传距离在0．007-0．009之间;两组罗非鱼之间的遗传距离较大,在0．030-0．035之间,表明罗非鱼ITS1序列多态性较高,适合于种类区分。结合部分18S和5．8S序列,细胞核rDNA具有鉴别罗非鱼及其杂种的潜力。  相似文献   

9.
运用PCR直接测序法,对采自爱尔兰、日本、韩国和中国的大叶藻、矮大叶藻、丛生大叶藻和红须根虾形藻及GenBank中的宽叶大叶藻5种大叶藻叶绿体的matK、rbcL和核糖体ITS的部分序列进行测定,并比较分析了5种大叶藻3个目的片段的核苷酸序列,结果发现胞嘧啶(C)在3个目的片段上的含量均较低。ITS片段检测到172处核苷酸替换,表现出丰富的遗传多态性。matK基因片段上有52处核苷酸替换,rbcL基因片段上有20处核苷酸替换,且大部分替换来自于第三密码子的同义替换,种间在氨基酸水平上产生了一定的分化。基于ITS、matK和rbcL 3个目的片段,利用邻接法、最大简约法、最大似然法和贝叶斯法构建的系统发育树结果基本一致,明显分为3大支。矮大叶藻与大叶藻属间3种大叶藻的核苷酸最小差异值为19.33%,在分子数据上达到了属的水平。基于matK和rbcL基因片段拼接序列的分析结果表明:大叶藻与丛生大叶藻的分化时间在上新世(2～2.7百万年前),与宽叶大叶藻的分化时间在上新世(4～5.3百万年),与矮大叶藻的分化时间在渐新世(27～36百万年前),与红须根虾形藻的分化时间在始新世(33～44百万年前)。4个地区大叶藻的...  相似文献   

10.
ABSTRACT:   Genetic evidence of the occurrence of natural hybridization between female Pinctada fucata and male Pinctada maculata among wild pearl oysters ( n  = 20) collected for use as the mother shell for private pearl farming in the Oshima Strait at Amami-o-shima, Kagoshima Prefecture, Japan, were obtained. A polymerase chain reaction-based species identification method for Pinctada was developed using polymorphisms in the internal transcribed spacer (ITS) region of the nuclear ribosomal RNA (rRNA) gene. This method enabled the amplification of the ITS regions using a primer set specific for P. maculata and P. fucata . However, 10 of 20 individuals morphologically identified as P. fucata had sequences specific to both P. maculata and P. fucata in the ITS region. These putative hybrids showed sequences of a maternally inherited mitochondrial 16S rRNA gene, identical to that of P. fucata . Shells of the putative hybrids were difficult to discriminate from those of P. fucata exhibiting similar taxonomic traits. Moreover, the hybrids exhibited slower growth than P. fucata but faster growth than P. maculata .  相似文献   

11.
以相应引物经PCR扩增了太平洋牡蛎 (Crassostreagigas)的核糖体转录间区域 (ITS 1和ITS 2 )及线粒体 16SrDNA和COI基因片段。PCR产物经T 载体连接后进行克隆和测序 ,分别得到长度为 5 4 3、791、5 30和 70 0bp的核苷酸序列。 4个DNA片段的A、T、G和C碱基含量分别为 2 3.5 7%、2 0 .0 7%、2 9.4 7%和 2 6 .89% (ITS 1) ,2 7.4 3%、19.2 2 %、2 7.0 5 %和2 6 .30 % (ITS 2 ) ,2 9.2 5 %、2 9.2 5 %、2 3.0 2 %和 18.4 9% (16SrDNA) ,2 2 .71%、39.4 3%、2 0 .4 3%和 17.4 3% (COI)。实验证明ITS 1和ITS 2引物在贝类中通用性良好。文中同时讨论了 4个序列在我国几种牡蛎的种类鉴别及相关研究的应用潜力  相似文献   

12.
ABSTRACT:   Paralytic shellfish poisoning (PSP) toxins produced by Alexandrium isolates from Korea were analyzed by high-pressure liquid chromography. Species designation of the regional isolates was determined by morphological criteria and ribotyping inferred from sequences of the 28S rDNA D1-D2 region. Toxin analysis performed at the exponential growth phase, revealed that the two strains of A. fraterculus were non-toxic, while the strains of A. tamarense and A. catenella were toxic. Toxic isolates DPC7 and DPC8 of A. catenella produced GTX1, 2, 3, 4, 5, dcGTX2, 3, C1, 2, neoSTX and STX with trace or non-detectable levels of C3 and C4, while isolates UL7, KDW981, SJW97043, SJW97046, KJC97111 and KJC97112 of A. tamarense produced GTX1, 2, 3, 4, dcGTX3, C1, 2, neoSTX with trace or non-detectable levels of C3, 4, dcSTX and STX, and no GTX5 and dcGTX2. The major toxins produced by A. catenella were C1 +2, and those of A. tamarense were C1 +2 and GTX4 in most of the isolates. A. tamarense strains other than SJW97046 produced a relatively high proportion of carbamate toxins, reflecting the high toxicity scores of shellfish intoxication in sampled coastal areas. Two representative toxic isolates, A. tamarense SJW97043 and A. catenella DPC7, were cultured for 30 days in batch mode and subjected to toxin analysis at 5-day intervals. Comparison of toxin productivity in terms of total toxin content, toxin components, and their variations with culture age revealed marked differences between the two strains.  相似文献   

13.
A recent study showed Thalassiosira weissflogii to be a diatom containing suitable nutrition for larviculture of the black tiger shrimp, Penaeus monodon. Accurate and practical identification of this diatom species is therefore important for commercial hatcheries. The purpose of this study was to establish a DNA-based method of identification to supplement morphological examination, avoiding confusion with other Thalassiosira sp. Primers, 18SF/28SR1, specific for ribosomal DNA genes (3′-end of 18S rDNA through 5′-end of 28S rDNA, covering two internal transcribed spacers), were employed as a first-step polymerase chain reaction, followed by a second nested amplification using specifically designed primers, ITS1-F-D/ITS1-R-D. The nested-PCR result revealed specificity in the detection, distinguishing T. weissflogii from T. pseudonana, Cyclotella meneghiniana, and Chaetoceros sp., and the PCR fragment of the amplified region had a sequence that was 99% identical to the T. weissflogii sequence held by GenBank.  相似文献   

14.
Molecular attempt to identify prey organisms of lobster phyllosoma larvae   总被引：2，自引：0，他引：2  
ABSTRACT:   A molecular approach was adopted to investigate the natural diets of palinurid and scyllarid lobster phyllosoma larvae. The central domain of the 18S rDNA gene was amplified using nested polymerase chain reaction (PCR) and genomic DNA extracted from the larval hepatopancreas. The resulting 18S rDNA clones were screened using restriction fragment length polymorphism (RFLP) analysis, and then FASTA homology search and phylogenetic analysis were performed on the nucleotide sequences to identify the source of the eukaryotic organisms. The feasibility of this method was confirmed using the laboratory-reared phyllosoma larvae of the Japanese spiny lobster Panulirus japonicus that were fed either with common mussel Mytilus edulis gonads or with Artemia nauplii exclusively. Among the 804 clones isolated from five wild-caught mid- to late-stage phyllosoma larvae (three palinurids and two scyllarids), 0–132 clones per sample possessed restriction profiles distinct from those of the hosts. The Cnidaria and Urochordata DNA were identified from both the palinurid and the scyllarid larvae, which were thought to be prey animals for the mid- to late-stage phyllosoma larvae.  相似文献   

15.
ABSTRACT:   The optimal water temperature in seed germination and the upper critical water temperature in seedling growth were determined for Zostera marina collected from Ise Bay, Japan. The relationship between the seed germination rates and seed storage period (0, 30 and 60 days at 0°C) was also examined. The optimal water temperature for seed germination was in the range from 10 to 15°C regardless of the storage periods, in which germination rates ranged from 35 to 57%. Seedlings grown from seed up to 10 cm in total length were cultured for 1 week under various water temperatures to measure their relative growth rates. The optimal water temperature in growth was in the range from 20 to 25°C; relative growth rates ranged from 2.0 to 2.6%. Seedlings could survive up to a water temperature of 28°C, but most seedlings withered at 29 or 30°C. The optimal water temperatures for seed germination and seedling growth were related to the seasonal changes of water temperature at the sampling site. Although seedlings were rarely observed in the field in summer, they can grow at temperatures as high as 28°C. Therefore, Z. marina may extend its distribution as far as where the summer water temperature is lower than 28°C.  相似文献   

16.
2018年11月至2019年5月,在乌鲁木齐市周边市场及养殖场进行鱼类寄生虫调查过程中发现,不同地域的罗非鱼鳃部有大量锚首虫寄生,经染色观察,对后吸器及交接器等结构进行绘图、测量,同时选用28S、18S-ITS1-5.8S和COⅠ3个分子标记进行扩增、克隆和序列测定,利用核糖体RNA与相关物种进行系统发育分析。研究结果显示,形态学结果可初步鉴定,该虫体为锚首虫亚科嗜丽鱼虫属的几丁嗜丽鱼虫和彼丽嗜丽鱼虫。扩增得到几丁嗜丽鱼虫的28S、18S-ITS1-5.8S及COⅠ序列长度分别为863、1019 bp和592 bp,与GenBank中已发表的几丁嗜丽鱼虫的相似性均超99.5%;扩增得到彼丽嗜丽鱼虫的28S、18S-ITS1-5.8S及COⅠ序列长度分别为863、1005 bp和572 bp,与GenBank中的彼丽嗜丽鱼虫的相似性均超94%,且与刀茎嗜丽鱼虫的相似性均达99.3%以上。从基于核糖体RNA所构建的最大似然树和遗传矩阵来看,本试验中几丁嗜丽鱼虫与不同地区的几丁嗜丽鱼虫聚为一支,且遗传距离均为0;彼丽嗜丽鱼虫与巴西的彼丽嗜丽鱼虫、捷克的刀茎嗜丽鱼虫聚成的拓扑结构自展值为99%和100%,且遗传距离为0.000~0.003,其结果与形态学结果相一致。试验结果补充了该虫在国内分子方面的资料,同时从分子生物学角度彼丽嗜丽鱼虫与刀茎嗜丽鱼虫为同物异名的分类观点提供支撑。  相似文献   

17.
ITS2 (Internal transcribed spacer 2)是位于核糖体5.8S和28S基因之间的非编码序列。为了探讨该片段的多样性特征以及进化模式,本研究选取了鲈形目(Perciformes) 5科11种鱼类为研究对象,共获得了444条ITS2克隆序列,其长度范围为332～515 bp。比较种内不同序列的长度发现,金带细鲹(Selaroides leptolepis)在种内存在24 bp的差异,剑鱼(Xiphias gladius)在种内存在32 bp的差异,这2种鱼类的差异较为明显;其余9种鱼类的长度相对比较保守,长度差异小于14 bp。依据11种鱼类的保守位点数、变异位点数、简约信息位点数、单倍型数、保守位点比例、单倍型多样性指数、核苷酸多样性等特征分析发现,种内存在着不同程度差异,特别是金带细鲹的ITS2序列存在着Type A、Type B和Type C 3种类型,各类型间差异较大。根据序列的多样性特征推断,金带细鲹和剑鱼的进化方式为非协同进化;蓝圆鲹(Decapterus maruadsi)、大甲鲹(Megalaspis cordyla)、吉打副叶鲹(Alepes djedaba)和日本竹筴鱼(Trachurus japonicas)的长度和变异位点均存在着一定程度的差异,但差异并不明显,视为不严格的协同进化;泰拉鰆鲹(Scomberoides tala)、布氏鲳鲹(Trachinotus blochii)、尖吻鲈(Lates calcarifer)、射水鱼(Toxotes chatareus)和军曹鱼(Rachycentron canadum) 5种鱼类为协同进化;另外,协同和非协同进化状态与分类系统没有相关性。序列比对发现,大甲鲹种内存在着由协同进化方式演变为非严格的协同进化方式的过度序列;在金带细鲹的3个不同个体中,序列间存在着从协同进化、非严格的协同进化演变为非协同进化的3种进化方式。基于ITS2序列构建的11种鱼类的邻接系统树显示,每种鱼类的克隆都分别按种单独聚为一支,鲹科7属鱼类各属也是单独聚支,表明ITS2不仅可以用在种类的分子鉴定,同时也可以作为分子标记应用于鲹科和属级水平的系统关系研究。  相似文献   

18.
由于钵水母类生物地理学研究的缺乏以及不同时期形态变异较大等原因,对其分类鉴定比较混乱和困难。为弥补形态学分类的缺陷,采用通用引物PCR扩增法,测定了分布于黄海北部和辽东湾海域海蜇(Rhopilema esculentum)、沙蜇(Nemopilema nomurai)、海月水母(Aurelia sp.)、白色霞水母(Cyanea nozakii)4种大型水母的ITS-5.8S rDNA序列,同时利用Gen Bank数据库中已有的钵水母纲(Scyphomedusae)ITS1(the Ribosomal First Internal Transcribed Spacer)同源序列对其进行序列分析并构建系统树,分析ITS1序列片段在大型水母种类鉴定方面的可行性及其在钵水母类系统及演化中的应用。结果显示,4种水母的ITS-5.8S rDNA序列变异较大且具有明显的序列长度多态性,序列长度范围675~833 bp。钵水母纲很多种类的ITS1序列具有种内长度多态性现象,这种长度多态性主要是由于微卫星重复次数不同所造成的。钵水母纲科间遗传距离为0.295~0.491,种间遗传距离为0.024~0.812;除白色霞水母和海蜇外,种内个体间遗传距离为0.000~0.099。采用ML法(maximum likelihood)和贝叶斯法(Bayesian)构建的分子系统树拓扑结构不完全相同且与形态分类学的观点不太一致。研究表明,ITS基因序列在钵水母纲不同阶元间变异较大,适合于钵水母纲种类鉴定和属内种间水平的系统进化研究。  相似文献   

19.
As a trial to develop a method of authenticating the place of origin of circulated Undaria pinnatifida products, we investigated their intraspecific genetic diversity using the mitochondrial cytochrome c oxidase subunit 1 gene (cox1) and the internal transcribed spacer 2 (ITS2) region of the nuclear ribosomal DNA (rDNA) sequence. Four dried U. pinnatifida products labeled with their origins (one from Japan, one from China and two from Korea), natural plants collected from three locations (two from Japan and one from China), and cultivated plants collected from two locations (one from Japan and one from China) were used in the present study. The amplified fragments of cox1 were 664 bp in length, and the aligned sequences were highly homologous. Among the nine sequences, no insertions or deletions were found and six substitution positions were detected, and they were classified into five haplotypes. In contrast, multiple highly variable regions were found in ITS2, and some of them carried a restriction site for Mbo II. Polymerase chain reaction-restriction fragment length polymorphism analysis showed different restricted profiles among the tested samples. The availability of molecular markers for authenticating food products of U. pinnatifida is discussed.  相似文献   

20.
The ribosomal DNA internally transcribed spacer 1 (ITS1) was investigated in the search for an appropriate genetic marker that was suitable for phylogenetic study and species identification of eight major exported shrimp species in southeast China. Using the selected primers, the amplified ITS1 sequences exhibited a high degree of length polymorphisms, ranging from 448 bp in Metapenaeopsis dalei to 1491 bp in Macrobrachium nipponense . Many microsatellite loci were found at the 5' end and in the middle region of ITS1, which seemed to be associated with intragenomic sequence variation among samples of the same species. This variation might obscure the phylogenetic relationship between some shrimp populations, but the separation of five Penaeus species was well supported. In combination with polymerase chain reaction-restriction fragment length polymerism methods analysis, ITS1 sequences from shrimp species belonging to different families and genera could also be easily discernable. The results suggested that ITS1 was highly variable among different shrimp groups and could be an appropriate marker for species identification and molecular systematic studies.  相似文献   

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