猪ADAR2基因全长cDNA克隆、序列特征及表达模式分析     

张跃博  王立刚  侯欣华  刘欣  颜华  张龙超  王立贤 《畜牧兽医学报》2021,52(3):620-629

旨在克隆猪作用于RNA的腺苷脱氨酶2基因（ADAR2）全长cDNA序列,同时对该基因在猪不同组织中的表达规律进行探索。利用RACE （rapid-amplification of cDNA ends）对大白猪ADAR2基因mRNA全长序列进行克隆,并进行生物信息学分析;用荧光定量PCR方法检测35日龄大白猪心、肝、肺、肾、脾、脑、小肠、背最长肌和背部脂肪9种组织中ADAR2的表达水平。结果表明,猪ADAR2基因cDNA全长6 305 bp,共包含12个外显子,编码704个氨基酸,与人、黑猩猩、猕猴、长臂猿、黄牛、山羊和绵羊的CDS区核酸序列和氨基酸序列的一致性均在84%以上。该基因编码的蛋白含有2个双链RNA结合基序和一个脱氨酶结构域。猪ADAR2在检测的各组织中均表达,其中在肺中的表达量最高。综上所述,本研究成功克隆了猪ADAR2基因全长cDNA序列,并且发现其在猪体内广泛表达,为深入研究ADAR2的功能奠定了良好的基础。  相似文献   

人兽共患寄生虫病候选疫苗分子筛选方法研究进展     

代国栋  闫鸿斌  李立  付宝权  贾万忠 《中国畜牧兽医》2021,48(6):2177-2187

人兽共患寄生虫种类多、宿主广泛且危害严重。血吸虫病、棘球蚴病、囊尾蚴病、旋毛虫病、弓形虫病等是常见的重要人兽共患寄生虫病。人类和家畜饱受寄生虫病的危害,这对公共卫生和畜牧业造成了很大的影响。控制传染源、切断传播途径和保护易感群是控制人兽共患寄生虫病流行的综合防控措施。在综合防控策略中,疫苗的使用是切断循环链、控制乃至消灭人兽共患寄生虫病的理想和有效途径之一。选用高效的抗原筛选方法挖掘潜在的疫苗候选分子是开发疫苗的前提和关键。抗原筛选技术的更新换代使得研究者发掘出了更多新抗原和保护性多肽。现有的抗原筛选方法主要包括传统的粗抗原筛选法、cDNA文库筛选法、蛋白质组学筛选法、生物信息学及多组学技术联合筛选法。很多抗原筛选的方法是伴随寄生虫疫苗研究的发展应运而生的,粗抗原筛选法是基于抗原抗体相互反应的免疫学原理而设计的,此方法筛选的天然抗原可引起机体较强的免疫反应;cDNA文库筛选抗原的优势在于筛选更有针对性,所以候选产物的成分更单一、明确;蛋白质组学筛选法是基于质谱而兴起的一种筛选技术,它既可对未知蛋白组分进行鉴定,还可对鉴定结果进行差异比较,在未知分子的发现和功能特殊的靶分子筛选中发挥着重要作用;随着后基因时代的到来,生物信息学及多组学联合筛选技术使得抗原筛选逐步进入了多维、立体的筛选模式,也使得候选抗原及其表位的功能研究更加深入,这为基因工程疫苗和多肽疫苗候选分子的筛选提供了技术手段。  相似文献   

白菜型油菜DFR基因的克隆与序列分析     

李运涛  李加纳  柴友荣  杨成军  雷波 《分子植物育种》2005,3(4):485-492

By using RACE (rapid amplification ofcDNA ends) based homologous cloning strategy, we have successfully isolated the genomic and full-length cDNA sequences of a gene encoding typical DFR (dihydroflavonol-4-reductase) from black-seeded Brassica campestris L. var. oleifera DC.. The gene, designated BcDFR here, is 1 722bp in length and harbors 5 introns with typical splice sites of plant DFR genes. BcDFR cDNA is 1311bp in length with a 1 158bp ORF as well as a 25bp 5‘ UTR and a 128bp 3‘ UTR. The encoded BcDFR protein is 385 aa with a calculated Mw of 42.85kD and a pI value of 5.55. The nucleotide and amino acid sequences of this gene share extensive homologies to plant DFR genes of wide origins especially high similarities to Cruciferous DFR genes. Sequence analyses such as phylogenetic analysis, conserved domain search and substrate specificity region detection all indicated that BcDFR gene is a quite potentially biofunctional gene. Its cloning enables us to further dissect the possible relatedness between DFR gene and Brassica seed coat color traits and to create transgenic novel yellow-seeded rapeseed germplasm through antisense- or RNAi-suppression of DFR gene expression in black-seeded elite cultivars.  相似文献   

Molecular Cloning and Characterization of a Novel Gene Involved in Fatty Acid Synthesis in Brassica napus L.     

XIAO Gang  ZHANG Zhen-qian  LIU Rui-yang  YIN Chang-fa  WU Xian-meng  TAN Tai-long  GUAN Chun-yun 《中国农业科学(英文版)》2013,(6):962-970

Based on the sequence of a novel expressed sequence tag (EST), the full-length cDNA of 1 017 nucleotides was cloned from Brassica napus cv. Xiangyou 15 through rapid amplification of cDNA ends (RACE). The gene was designated as Bnhol34 (HQ585980), encoding a protein of 338 amino acids. BLAST analysis showed no high degree of sequence identity to any known gene. The calculated molecular weight of the Bnhol34 protein was 36.23 kDa, and the theoretical isoelectric point was 8.74. The Bnhol34 was also cloned from a high oleic acid mutant 854-1 through homologous cloning. There was no difference between the two Bnhol34 genes. Bnhol34 was localized in a tissue-specific manner in B. napus, and its expression level was about eight-fold greater in Xiangyou 15 seeds than in 854-1. The promoter region sequences of Bnhol34 were then isolated from Xiangyou 15 and 854-1, and a 93-bp deletion was found to occur in the Bnhol34 promoter region of 854-1. Three abscisic acid-responsive cis-elements (ABRE) were identified in the promoter region of Xiangyou 15. Real-time PCR analyses revealed that exogenous abscisic acid increased Bnhol34 expression by about four-fold in Xiangyou 15 seeds, yet did not change Bnhol34 expression in 854-1. It appeared that Bnhol34 might be abscisic acid insensitive in 854-1.  相似文献   

应用PCR技术检测兽医生物制品中污染病毒的研究     

朱善元 《四川畜牧兽医》2000,27(3):27-28

本文阐述了PCR(基因扩增 )技术的原理、基本操作方法 ,及其在兽医生物制品疫苗污染病毒检测中的应用。着重介绍了应用PCR技术检测新城疫病毒和瘟病毒的方法 ,具有快速、敏感、特异性高等优点 ,对兽医生物制品的研究、生产和临床应用具有一定的指导意义  相似文献   

Characterization of a pothos (Scindapsus aureus) virus with unusual properties     

S. Sabanadzovic  D. Boscia  P. Saldarelli  G. P. Martelli  R. Lafortezza  R. Koenig 《European journal of plant pathology / European Foundation for Plant Pathology》1995,101(2):171-182

A virus for which the name of pothos latent virus (PoLV) is proposed, was isolated by inoculation of sap from symptomless plants ofScindapsus aureus. PoLV had isometric particlesc. 30 nm in diameter, a monopartite genome consisting of a non polyadenylated, single-stranded RNA moleculec. 4,300 nucleotides in length, constitutingc. 17% of the particle weight, and a single type of coat protein subunit with aM _r ofc. 40,000 Daltons. The biological properties (host range reactions) of PoLV resembled those ofTombusviridae for it infected most of the artificial hosts locally, inducing symptoms recalling those elicited by several species of the above family. Like tombus- and carmoviruses, PoLV had two subgenomic RNAs which, however, differed in size from those of both genera. The dsRNA pattern was also distinctly different. Cytopathological features recalled those of tombusviruses except for the lack of multivesicular inclusion bodies. PoLV was serologically related to, but distinct from twoCarmovirus (i.e., galinsoga mosaic and Ahlum waterborne viruses) and threeTombusvirus species (i.e. eggplant mottled crinkle, Sikte waterborne and Lato river viruses). Thus, PoLV had properties somewhat intermediate between those ofTombusvirus andCarmovirus genera but bridged the two taxa through the serological relationship with some of their species. The taxonomic position of PoLV is still undetermined. It must await the results of molecular investigations now underway.  相似文献   

Expression of RANTES mRNA in skin lesions of feline eosinophilic plaque     

Kimura T  Kano R  Maeda S  Tsujimoto H  Nagata M  Hasegawa A 《Veterinary dermatology》2003,14(5):269-273

Abstract One of the mechanisms of eosinophil infiltration is its induction by chemoattractants such as regulated upon activation, normal T-expressed and secreted (RANTES) which is a cysteine–cysteine chemokine that mediates chemotaxis and activation of eosinophils in humans and mice. Skin lesions of feline eosinophilic plaque are characterized by a predominant infiltration of eosinophils. The mechanism(s) of eosinophilic infiltration in the skin and/or mucosa of cats is unknown. It is possible that RANTES is involved. To investigate the presence of RANTES in the skin of cats with eosinophilic plaques and nonaffected skin, we cloned and sequenced the full-length feline RANTES cDNA gene, in order to determine whether it is present in the skin of cats with eosinophilic plaques and/or if it is present in normal adjacent skin. We were able to document the the expression of RANTES mRNAs in skin with feline eosinophilic plaque as well as in normal cat skin. The full-length cDNA sequence of the RANTES gene (742 bp) contained a single open reading frame of 276 bp encoding a protein of 92 amino acids. The amino acid sequence of feline RANTES shared 67 and 74% sequence identity with that of bovine and mouse RANTES genes, respectively. RT–PCR analysis on RANTES mRNA in the skin of cats with eosinophilic plaque revealed that its expression was higher in the eosinophilic plaque skin lesions than in the normal skin. The result suggested that RANTES might play a role to induce eosinophil infiltration in feline eosinophilic plaque lesions.  相似文献   

应用cDNA微阵列芯片技术筛选猪蛔虫性别差异表达基因的研究   总被引：6，自引：0，他引：6  

邹丰才  吴绍强  廖申权  林瑞庆  李明伟  宋慧群  黄翠琴  朱兴全 《畜牧兽医学报》2006,37(2):163-167

采用cDNA微阵列芯片技术，从所构建的猪蛔虫雌、雄成虫cDNA消减文库分别挑取1044和1119个克隆，PCR扩增其插入片段，经纯化后点样于预先处理好的基片上（双点杂交），制备成cDNA微阵列芯片。将分别标记荧光素Cy3-dUTP和Cy5-dUTP的雌虫和雄虫cDNA探针，与制备好的cDNA芯片杂交（平行进行反标杂交试验）。根据每个点杂交后的Ratio值，筛选出双点杂交和正反标中都同时具有表达差异的基因克隆共1559个。将表达差异最明显的前831个克隆进行测序，获得720个有效序列，经生物信息学分析发现，雄虫特异表达的主要精于蛋白和雌虫特异表达的卵巢信息蛋白的基因序列多数与新杆属线虫存在同源性，有31个可能是新的ESTs。性别差异表达基因及其相关生物信息的获得为下一步研究基因功能奠定了基础。  相似文献   

猪细胞因子cDNA表达文库的构建及其基因的克隆鉴定     

夏小慧  景志忠  王勤  窦永喜 《畜牧兽医学报》2006,37(4):352-355

为克隆和研究猪细胞因子及相关基因,应用建库试剂盒成功构建了猪细胞因子cDNA表达文库。采取健康猪外周血及淋巴结,分离单个核细胞,经LPS PHA联合刺激不同时间后,提取总RNA。将各组样品混合,分离纯化mRNA。反转录合成cDNA第一链和第二链,与EcoRI和HindⅢ接头连接。酶切和过柱分级分离后,与λScreen载体连接,经体外包装转染E.coliER1647宿主菌,进行文库容量测定和扩增。以扩增文库的DNA为模板,利用已知基因引物克隆猪IL-2和IL-4的cDNA并进行测序。结果表明,成功构建了猪细胞因子cDNA文库,文库原始库容量为8×105,插入片段在300~2 000 bp,扩增得到特定的IL-2和IL-4基因,说明文库质量高、代表性强,为进一步从文库中筛选未知细胞因子及相关基因提供了有效的工具。  相似文献   

青海血蜱cDNA表达文库的免疫学筛选和阳性克隆的鉴定   总被引：6，自引：0，他引：6  

高金亮  罗建勋  樊瑞泉  魏永红  李文卉  任巧云  关贵全  殷宏 《中国兽医学报》2006,26(6):631-633

为获得抗青海血蜱免疫原基因，用免抗青海血蜱差异蛋白阳性血清和兔抗青海血蜱唾液蛋白阳性血清对青海血蜱cDNA表达文库进行了免疫学筛选，经过初筛和复筛共获得58个阳性信号。用所得阳性噬菌体转染宿主菌BM25．8使之自动亚克隆为重组质粒，用此亚克隆质粒转化宿主菌JM109并从中提取重组质粒进行PCR、酶切和测序分析。序列分析表明：共获得新cDNA序列21个。将前5个cDNA登录GenBank／ncbi，获取登录号。所获阳性克隆为青海血蜱保护性抗原的筛选奠定了基础。  相似文献