用RAPD标记分析高羊茅的遗传多样性   总被引：6，自引：5，他引：6  

田志宏  邱永福  严寒  何勇 《草业学报》2007,16(1):58-63

采用RAPD分子标记技术对从国外引进的15个高羊茅品种的遗传多样性进行了研究。从60个随机引物中筛选出12个有效引物,它们共扩增出85条DNA带,其中59条为多态性带,占69.41%,平均每个引物扩增出多态性带4.92条;利用NTSYS-PC软件计算出的不同品种间Jaccard遗传相似系数(GS)变化范围较大,为0.373~0.932;根据得到的遗传相似性矩阵进行非加权组法(UPGMA)聚类分析,建立高羊茅品种的分子系统树状图;以相似系数0.68为标准,可将所有品种分为3类,品种翠丽和贝克各自聚为一类,其余13个品种聚成一类。  相似文献   

Hybrid detection and characterization of Curcuma spp. using sequence characterized DNA markers     

S. Anuntalabhochai  S. Sitthiphrom  W. Thongtaksin  M. Sanguansermsri  R.W. Cutler 《Scientia Horticulturae》2007

The tropical flower Curcuma alismatifolia of the family Zingiberaceae is widely valued as a cut flower and potted plant due to its range of vibrant colors and large long-lasting inflorescences. Much of this diversity has been cultivated through extensive hybridization of wild varieties since hybrids often exhibit dramatic phenotypic differences from the parents. This phenotypic diversity though has led to difficulties identifying and classifying the relatedness of Curcuma varieties particularly between hybrids. One Curcuma variety called ‘Patumma’ is of particular importance since it has strong stalks, large symmetric inflorescences, is moderately resistant to fungal blight, has a high yield, and has been used to produce numerous high quality hybrids. Since Patumma is one of the key Curcuma varieties from which many hybrid crosses and induced mutation varieties were developed, we chose it as a target to be characterized using a molecular marker. Starting with a set of 11 unique decamer primers, polymorphic bands ranging from 100 to 2500 base pairs were used to examine 20 Curcuma varieties from which banding patterns of interest were selected for conversion to the more reproducible and robust sequence characterized amplified region (SCAR) markers. In particular, one SCAR marker amplified a region 600 bp in length which was conserved in all Patumma varieties and hybrids and as an independent test did not amplify an additional series of 24 distinct Curcuma varieties. Since new varieties of Curcuma are often dissimilar from their progenitors, this genomic analysis allows a cost-effective morphologically independent characterization of Curcuma hybrids.  相似文献   

小麦叶锈菌的特异性分子诊断检测技术   总被引：1，自引：1，他引：1       下载免费PDF全文

曹丽华  徐世昌  陈万权  刘太国  蔺瑞明 《植物保护学报》2007,34(6):561-566

小麦叶锈病由Puccinia triticina引起,是我国小麦生产上的重要病害。本研究旨在建立小麦叶锈菌快速、准确的PCR诊断检测技术体系,用于病害精准测报和综合防控。以真菌β-微管蛋白基因的保守序列为引物,进行小麦锈菌gDNA的PCR比较分析,发现小麦叶锈菌具有长度为268bp的特异性DNA片段;序列分析后设计了2对专化性引物,成功获得检测灵敏度为5.00pg/μL模板DNA浓度水平的小麦叶锈菌种的特异性SCAR标记。对55个来自我国不同麦区的小麦叶锈菌标样以及其它麦类病原真菌的检测表明,该叶锈菌标记的检测可靠性达100%。人工接种条件下,叶锈菌侵染24h后,即可在小麦叶片内检测到该标记。  相似文献   

Pathogenicity and RAPD analysis of Phytophthora nicotianae pathogenic to pepper in Tunisia     

Trabelsi Darine  M.B. Allagui  M. Rouaissi  A. Boudabbous 《Physiological and Molecular Plant Pathology》2007,70(4-6):142-148

Nine isolates of Phtophthora nicotianae were isolated from infected pepper plants. Their pathogenicity was studied in Capsicum annuum in comparison with P. nicotianae isolates from tomato and tobacco. The pathogenicity test showed that pepper isolates of P. nicotianae are adapted to their host. Banding patterns obtained by RAPD analysis with six oligonucleotide primers revealed polymorphism that grouped the isolates independently of the plant host. The polygenic dendrogram showed that pepper isolates were more similar to tomato isolates than to tobacco isolates. The RAPD bands of 1300 and 1500 bp, detected with primers OPD-01 and OPD-10, respectively, appeared specific to the most pathogenic pepper isolates. The OPK-08-1950 seems specific to the isolates of P. nicotianae from tomato. These results suggest that host specified might occur in P. nicotianae and that may be due to interspecific hybridization events resulting in novel pathogenic behavior.  相似文献   

Cloning of DNA fragments specific to the pathotype and race of <Emphasis Type="Italic">Verticillium dahliae</Emphasis>     

Toshiyuki Usami  Shu Ishigaki  Hiroko Takashina  Yuko Matsubara  Yoshimiki Amemiya 《Journal of General Plant Pathology》2007,73(2):89-95

Japanese isolates of Verticillium dahliae, a causal agent of wilt disease in many plants, are classifiable into pathotypes based on their pathogenicity. Because these pathotypes are morphologically indistinguishable, establishing a rapid identification method is very important for the control of this pathogen in Japan. For cloning DNA fragments that are useful for identification and specific detection of V. dahliae pathotypes, we performed random amplified polymorphic DNA (RAPD) analyses using various isolates. One polymerase chain reaction (PCR) product, E10-U48, was specific to isolates pathogenic to sweet pepper. The other product, B68-TV, was specific to race 1 of isolates pathogenic to tomato. The specificity of these sequences was confirmed by genomic Southern hybridization. Further analyses revealed that the region peripheral to B68-TV obtained from the genomic DNA library includes the sequence specific to all isolates pathogenic to tomato (races 1 and 2). Moreover, sequence tagged site (STS) primers designed from B68-TV and its peripheral region showed race-specific and pathotype-specific amplification in a PCR assay. The probes and primers obtained in this study are likely to be useful tools for the identification and specific detection of pathotypes and races of V. dahliae. The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under accession number AB095266.  相似文献   

中国主栽双孢蘑菇菌株的DNA多态性   总被引：14，自引：3，他引：11  

詹才新  高红亮 《食用菌学报》1998,5(2):1-7

本文以中国双孢蘑菇不同主栽产区的9个具代表性的双孢蘑菇菌株为材料,用20个随机引物对其进行RAPD分析。结果表明,20个随机引物中,有15个随机引物的扩增产物DNA片段表现出明显的多态性,其中每个引物对不同菌株扩增出的DNA片段数目各不相同,而且不同引物扩增出的DNA带谱也不同,差异较大。这15个引物对供试菌株总共扩增出168条DNA片段,其中最大的片段可达6.77kb,最小的DNA片段仪有0.31kb。同时,比较了供试菌株两两间的遗传相似性,发现它们之间的变化不大,其相似系数从0.6891到1.0000,而平均相似系数仅为0.8500,表明供试菌株之间的亲缘关系较近,遗传变异不丰富。另外,采用系统聚类法中的类平均法,对供试菌株相似系数两两间进行聚类分析并生成树状图谱,直观准确地揭示了它们之间的差异。当相似系数为77％时,所有供试菌株都被聚为一大类,说明我国主栽双孢蘑菇菌株的遗传基础较狭窄,可能来源于同一品系,这为进一步开展双孢蘑菇菌种的遗传改良提供了理论依据。  相似文献   

RAPD及其在果树上的应用     

李发芳  罗正荣  蔡礼鸿 《果树学报》1998,(3)

就RAPD的特点、操作及其在果树品种鉴定、遗传多样性检测、系谱解析和遗传图谱构建等方面的应用和进展进行了简要的阐述。  相似文献   

运用随机扩增多态性DNA标记检测中国东北大豆灰斑病菌株遗传变异   总被引：13，自引：0，他引：13  

刘学敏  陈受宜 《植物病理学报》1998,28(1):43-48

 运用致病力和DNA多态性检测中国东北地区的35个大豆灰斑病菌分离物的遗传变异、根据菌株在9个品种(系)上的致病力反应可将其分为7个组。利用13个随机引物扩增供试菌株共计产生105个RAPD标记,其中78.1%具有多态性。通过聚类分析计算了各菌株间的遗传距离,并产生树状图,发现同一地区内及不同地区间的病菌表现遗传变异、致病性和DNA多态性间具有一定相关性。  相似文献   

RAPD分析技术在家蚕品种鉴定实践中的应用   总被引：3，自引：0，他引：3  

王韵  周泽扬  朱勇  鲁成  程道军  向仲怀  杨彪  曾华明 《蚕学通讯》1998,(1)

对重庆市一生产夏芳X秋白普种的蚕种场所生产的蚕种,按表型分为四类.利用RAPD技术,分别对每个品种基因组DNA进行PCR扩增,得到其指纹图谱,与标准夏芳、秋白、夏芳X秋白进行比较,取得与形态观察一致的结果.说明了RAPD技术在DNA水平上鉴别家蚕种质是可行的.  相似文献   

黄瓜种质资源遗传亲缘关系的RAPD分析   总被引：82，自引：6，他引：76  

张海英  王永健 《园艺学报》1998,25(4):345-349

利用ＲＡＰＤ技术对多个生态型的黄瓜材料的遗传亲缘关系进行了研究。从２００个１０碱基随机引物中筛选出２０个用于ＰＣＲ反应,３９．２％的扩增条带表现多态性;每个生态型品种都具有其特有的扩增（缺失）带以区别其他生态型品种;聚类分析将供试材料分为３大类群：华北类群、华南类群和欧洲温室类群。从分子水平验证了传统的黄瓜地域分类标准及黄瓜是遗传基础狭窄的蔬菜作物。对利用ＲＡＰＤ技术进行亲缘控制研究的可能性进行了探讨。  相似文献