基于格网的GCM数据修订分析未来海南岛农业水热资源的变化特征     

李宁  白蕤  李玮  陈淼  杨桂生  陈歆  范长华  张文 《中国农业气象》2021,42(6):447

以海南岛为研究区域，选用5个大气环流模式（GCMs）1970−1999年的逐日输出数据和同期地面气象观测数据，使用空间插值降尺度到0.5°×0.5°格网。以格网单元为基础，应用系统误差修订（修正值法或比值法）和多模式集合平均方法（贝叶斯模型平均法BMA或等权重平均法EW），训练与验证GCMs输出值并进行综合修订。在此基础上，分析RCP2.6、RCP4.5和RCP8.5情景下，未来海南岛近期（2020−2059年）和远期（2060−2099年）农业水热资源，包括年平均气温、1月平均气温、≥10℃积温、≥20℃积温、年降水量、1月降水量和≥20℃界限温度生长期间降水量的变化特征。结果表明：GCMs输出值的系统误差和BMA权重系数在格网间存在较大的空间差异，且GCMs输出值低估逐日最高气温约3.55℃，高估逐日最低气温约1.19℃，逐日降水量仅为观测值的54.35%。基于格网的综合修订，可有效降低GCMs输出值在空间上的不确定性，BMA与EW的修订结果相似，均优于单一GCM模式。通过格网BMA综合修订后，最高气温、最低气温和降水量在验证期的相关系数r分别约提升0.10、0.07和0.06；均方根误差RMSE分别约降低2.38℃、1.01℃和1.01mm；较单一GCM相对观测值的偏差平均约减少3.25℃、1.13℃和25.67mm。未来海南岛农业热量资源在空间上主要表现为从中部向外围逐渐升高，高温主要分布在南部至西部沿海地区，年平均气温的增幅全岛较为接近，1月平均气温、≥10℃积温和≥20℃积温的增幅分别表现为由东向西、由北向南和由中部向外围递减。在时间上，RCP8.5情景下所有农业热量资源均为极显著增加且增温最快，RCP4.5情景为先增加后平缓，RCP2.6情景较为平缓，远期无显著增温。未来海南岛降水资源在空间上转为由东向西逐步递减的格局，南部和北部沿海地区降水变率增加，西部和中部降水变率减少，在时间上无显著变化趋势。随着未来海南岛气候变暖和降水格局的改变，农作物适宜种植面积扩大，会对农业生产带来巨大挑战，应提前布局，做好趋利避害。  相似文献   

Hybrid breeding for biomass yield in winter triticale: II. Combining ability and hybrid prediction     

Johannes Trini  Hans Peter Maurer  Sigrid Weissmann  Tobias Würschum 《Plant Breeding》2020,139(5):906-915

Accurate hybrid prediction and knowledge about the relative contribution of general (GCA) and specific combining ability (SCA) are of utmost importance for efficient hybrid breeding. We therefore evaluated 91 triticale single-cross hybrids in field trials at seven environments for plant height, heading time, fresh biomass, dry matter content and dry biomass. Fresh and dry biomass showed the highest proportion (23%) of variance due to SCA. Prediction accuracies based on GCA were slightly higher than based on mid-parent values. Utilizing parental kinship information yielded the highest prediction accuracies when both parental lines have been tested in other hybrid combinations, but still moderate-to-low prediction accuracies for two untested parents. Thus, hybrid prediction for biomass traits in triticale is currently promising based on mid-parent values as emphasized by our simulation study, but can be expected to shift to GCA-based prediction with an increasing importance of GCA due to selection in hybrid breeding. Moreover, the performance of potential hybrids between newly developed lines can be predicted with moderate accuracy using genomic relationship information.  相似文献   

South-Western blot mapping方法的建立及其应用于锥虫细胞核中DNA结合蛋白的观察     

欧永春  T.Baltz 《中国兽医学报》1992,(2)

South-Westerm blot mapping是一种结合Western blotting和Southern blotting某些特点的方法.本文介绍用其成功地观察到锥虫核蛋白中DNA结合蛋白的情况,并对一个分子量在40000左右、于较严谨条件下与DNA结合的核蛋白进行了特性鉴定.该蛋白等量地存在于锥虫的前循环期和血液期,对双链DNA有较大的亲和力,并能与酵母菌复制起始片段结合.本文还介绍了锥虫细胞核的提取技术和核蛋白的制备技术.  相似文献   

烟草抗CMV细胞突变系筛选系统的研究   总被引：4，自引：0，他引：4  

陈廷俊 《植物保护学报》1997,24(4):317-320

在单倍体烟草6叶期接种CMV,接种前3d适当增施氮肥,接种后置28±2℃和自然光照条件下最适合CMV侵染和发病,发病后烟苗仅9或10位叶全部畸型褪绿,这是用绿岛法筛选抗CMV细胞突变系的临界选择压。用0.3％EMS(硫酸二乙酯)诱变烟苗心叶,接种CMV后置临界选择条件下从普通烟草良种Burley18的928个病株中选到每叶仅1～2个绿岛的畸型褪绿叶78片。截取绿岛进行组织培养得到146株无病试管苗,移栽盆钵后再接种CMV鉴定,选到抗CMV突变系R_2和R_8,其当代无性系在夏季网室条件下病情指数较亲本低40.1～45.3,并能通过有性过程传递。  相似文献   

DNA甲基化与基因组印记     

束婧婷 《畜牧兽医杂志》2005,24(6):18-20

综合论述了DNA甲基化与基因组印记的最新研究进展,论述了它们的生物学意义,并阐述了两者的关系.  相似文献   

The impact of truncating data on the predictive ability for single‐step genomic best linear unbiased prediction          下载免费PDF全文

Jeremy T. Howard  Tom A. Rathje  Caitlyn E. Bruns  Danielle F. Wilson‐Wells  Stephen D. Kachman  Matthew L. Spangler 《Zeitschrift für Tierzüchtung und Züchtungsbiologie》2018,135(4):251-262

Simulated and swine industry data sets were utilized to assess the impact of removing older data on the predictive ability of selection candidate estimated breeding values (EBV) when using single‐step genomic best linear unbiased prediction (ssGBLUP). Simulated data included thirty replicates designed to mimic the structure of swine data sets. For the simulated data, varying amounts of data were truncated based on the number of ancestral generations back from the selection candidates. The swine data sets consisted of phenotypic and genotypic records for three traits across two breeds on animals born from 2003 to 2017. Phenotypes and genotypes were iteratively removed 1 year at a time based on the year an animal was born. For the swine data sets, correlations between corrected phenotypes (Cp) and EBV were used to evaluate the predictive ability on young animals born in 2016–2017. In the simulated data set, keeping data two generations back or greater resulted in no statistical difference (p‐value > 0.05) in the reduction in the true breeding value at generation 15 compared to utilizing all available data. Across swine data sets, removing phenotypes from animals born prior to 2011 resulted in a negligible or a slight numerical increase in the correlation between Cp and EBV. Truncating data is a method to alleviate computational issues without negatively impacting the predictive ability of selection candidate EBV.  相似文献   

Single step genomic evaluation for female fertility in Nordic Red dairy cattle          下载免费PDF全文

Kaarina Matilainen  Ismo Strandén  Gert Pedersen Aamand  Esa A. Mäntysaari 《Zeitschrift für Tierzüchtung und Züchtungsbiologie》2018,135(5):337-348

Joint Nordic (Denmark, Finland, Sweden) genetic evaluation of female fertility is currently based on the multiple trait multilactation animal model (BLUP). Here, single step genomic model (ssGBLUP) was applied for the Nordic Red dairy cattle fertility evaluation. The 11 traits comprised of nonreturn rate and days from first to last insemination in heifers and first three parities, and days from calving to first insemination in the first three parities. Traits had low heritabilities (0.015–0.04), but moderately high genetic correlations between the parities (0.60–0.88). Phenotypic data included 4,226,715 animals with records and pedigree 5,445,392 animals. Unknown parents were assigned into 332 phantom parent groups (PPG). In mixed model equations animals were associated with PPG effects through the pedigree or both the pedigree and genomic information. Genotype information of 46,914 SNPs was available for 33,969 animals in the pedigree. When PPG used pedigree information only, BLUP converged after 2,420 iterations whereas the ssGBLUP evaluation needed over ten thousand iterations. When the PPG effects were solved accounting both the pedigree and the genomic information, the ssGBLUP model converged after 2,406 iterations. Also, with the latter model breeding values by ssGBLUP and BLUP became more consistent and genetic trends followed each other well. Models were validated using forward prediction of the young bulls. Reliabilities and variance inflation of predicted genomic breeding values (values for parent averages in brackets) for the 11 traits ranged 0.22–0.31 (0.10–0.27) and 0.81–0.95 (0.83–1.06), respectively. The ssGBLUP model gave always higher validation reliabilities than BLUP, but largest increases were for the cow fertility traits.  相似文献   

2010-2016年四川省食品动物源大肠杆菌的耐药性研究     

杨承霖  舒刚  赵小玲 《西北农林科技大学学报(自然科学版)》2020,48(9):24-30

【目的】了解2010-2016年四川省食品动物源大肠杆菌产超广谱β内酰胺酶(ESBLs)情况及其耐药基因的变迁。【方法】以2010―2016年收集的444株食品动物源大肠杆菌(鸡源225株，猪源219株)为对象，采用纸片扩散法和微量肉汤稀释法分别检测其产ESBLs情况和药物敏感性；采用PCR测序法和脉冲场凝胶电泳(PFGE)检测携带ESBLs菌株的基因型特征和部分菌株的亲缘关系。【结果】444株大肠杆菌中，产ESBLs菌株的检出率为27.7%，其中鸡源菌和猪源菌检出率分别为42.2%和12.8%。2010-2016年产ESBLs菌株从16.9%升高至40.4%，鸡源菌株ESBLs检出率随时间变化比猪源菌更明显；ESBLs阳性菌株对大多数药物的耐药率显著高于阴性菌株，且多重耐药性问题更严重；产ESBLs菌株携带的耐药基因以bla_TEM和bla_CTX-M为主，并以bla_TEM-1(63.3%)、bla_TEM-52(32.1%)、bla_CTX-M-55(42.2%)、bla_CTX-M-65(27.8%)和bla_CTX-M-14(21.1%)为主要流行亚型，且检出率及ESBLs基因亚型复杂性呈逐年上升趋势；ESBLs阳性菌株有广泛PFGE谱型，即便携带相同基因型的菌株也不存在亲缘关系。【结论】四川食品动物源大肠杆菌产ESBLs菌株检出率及其耐药基因亚型的复杂程度呈逐年上升趋势，ESBLs是造成多重耐药性的主要原因，ESBLs耐药基因以水平传播为主。  相似文献   

不同沙丘下梭梭(Haloxylon ammodendron)主根周围土壤特征的差异性研究     

马晓飞  楚新正  马倩  靳万贵 《土壤通报》2016,(1):156-163

为探明沙漠建群种植物个体周围土壤养分和盐分空间分布及成因,对艾比湖湖区边缘三种类型沙丘下梭梭主根周围土壤含水量,电导率,全量养分和速效养分的变化进行了研究。结果表明:1固定性沙丘在表层(0~10 cm)处土壤含水量最小,流动性沙丘和半固定性沙丘在浅层(10~20 cm)处最小,以距离主根面3m处表现最为显著(P0.05)。2流动性沙丘和半固定性沙丘土壤有机质和全氮的结构性和空间自相关性均较弱,固定性沙丘养分(全量养分、速效养分)的结构性则较好。3三种沙丘土壤养分的空间分布不均,主要以条状和斑块状分布,整体上呈现出一定的集聚趋势,其中流动性沙丘和固定性沙丘集聚范围在0~2 m圈层,但纵向集聚范围中,流动性沙丘以浅层(10~20 cm),固定性沙丘以较深层(20~40cm)出现集聚,形成"肥岛"。4流动性沙丘土壤电导率对沙丘的影响较其他各特征因子占主导地位,半固定性沙丘和固定性沙丘养分因子占主导地位。  相似文献   

Genomic prediction for yields,processing and nutritional quality traits in cultivated potato (Solanum tuberosum L.)          下载免费PDF全文

Ephrem Habyarimana  Bruno Parisi  Giuseppe Mandolino 《Plant Breeding》2017,136(2):245-252

Current potato breeding approaches are hampered by several factors including costly seed tubers, tetrasomic inheritance and inbreeding depression. Genomic selection (GS) demonstrated interesting results regardless of the ploidy level, and can be harnessed to circumvent these problems. In this work, three GS models were evaluated using 50,107 informative SilicoDArT markers and 11 traits in two values for cultivation and use (VCU) potato trials. Two key breeding problems modelled included predicting the performance of (i) new and unphenotyped clones (cross‐validation) and (ii) a VCU using another as training set (TS). GS models performed comparably. Cross‐validation accuracy was high for D35, D45, DMW and BVAL, in ascending order. Prediction accuracies of the VCUs were highly correlated, but the best prediction was obtained for the smaller VCU using the bigger as TS. Cross‐validation and VCU prediction accuracies were higher when bigger TSs were used. The findings herein indicate that GS can be attractively integrated in potato breeding, particularly in early clonal generations to predict and select for traits with low heritability which would otherwise require more testing years, environments and resources.  相似文献