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根据GenBank公布的日本脑炎(Japanese encephalitis virus,JEV)SA14-14-2减毒株E基因的核苷酸序列,设计并合成一对特异性引物,采用RT-PCR方法扩增其E基因全长cDNA,将扩增产物克隆入pUCm-T载体中,测序后亚克隆到原核表达载体pET-32a( ),筛选重组质粒,转化大肠埃希菌BL21(DE3)宿主菌.经IPTG诱导,SDS-PAGE分析表达产物.结果获得了含全长日本脑炎病毒E基因的重组质粒,经测序证实,与GenBank上E基因序列的同源性达到100%.所表达的融合蛋白主要以包涵体形式存在,为制备JEV实验室诊断抗原打下了基础. 相似文献
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为探究病原菌感染杂交鲟肠道转录组变化情况,本试验以常见病原菌类志贺邻单胞菌接种约360 d杂交鲟,于接种24 h后,采集杂交鲟肠道组织样本,提取组织总RNA,采用Illumina HiSeqTM 2000进行转录组测序,筛选杂交鲟肠道差异表达免疫应答基因并进行GO功能分类和KEGG信号通路分析,结果显示：与正常对照组比较,试验感染组杂交鲟肠道差异表达基因为13 542个,其中上调基因为9 774个,下调基因为3 768个;GO分析发现,杂交鲟肠道差异表达基因显著性富集到生物学过程的主要有免疫系统过程、免疫效应过程、刺激反应等;显著性富集到分子功能的主要有DNA结合、信号受体活性、核酸转录因子活性等;显著性富集到细胞组分的主要是胞外区、胞外区组成部分、细胞膜等。KEGG分析发现,杂交鲟肠道差异表达基因参与的免疫信号通路有RIG-Ⅰ样受体信号通路、Toll样受体信号通路和细胞溶质DNA传感途径。这些研究结果为深入探究杂交鲟对肠道病原微生物感染的防御分子机制奠定了良好的基础。 相似文献
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南美白对虾白便综合征病原霍乱弧菌的分离与药敏试验 总被引：1，自引：0，他引：1
为确定南美白对虾白便综合征的病原菌及其药物敏感性,采用传统方法从患白便综合征的南美白对虾肝胰腺中分离到病原菌菌株BB31,结合API 20E革兰阴性菌鉴定系统、16SrDNA序列及聚类分析对菌株BB31进行了鉴定,并通过纸片琼脂扩散法对菌株BB31的药物敏感性进行了测定。结果表明,菌株BB31为霍乱弧菌(GenBank登录号:KF446244),其16SrDNA序列与GenBank数据库中弧菌菌株的16S rDNA序列有99%~100%的同源性,而且与霍乱弧菌菌株RD1(GenBank登录号:KF307775)的亲缘性最近。菌株BB31对四环素、庆大霉素、恩诺沙星、氧氟沙星、诺氟沙星等抗生素的敏感性高,对磺胺甲氧嘧啶、呋喃唑酮、复方新诺明等抗生素不敏感。本研究证实霍乱弧菌是南美白对虾白便综合征的病原菌,庆大霉素、诺氟沙星等常规渔药可作为防控霍乱弧菌引起的南美白对虾白便综合征的用药参考。 相似文献
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为了研究嗜水气单胞菌重组弹性蛋白酶的酶学性质,试验根据GenBank中的嗜水气单胞菌弹性蛋白酶基因ahyB设计1对含酶切位点的特异引物,以嗜水气单胞菌J-1(AhJ-1)株为模板,经PCR扩增得到不含信号肽的成熟弹性蛋白酶基因片段(787 bp),并与pMD18-T载体连接、测序,再用DNAStar软件分析。结果表明:该基因片段与豚鼠气单胞菌胞外蛋白酶同源性高达95%,与嗜水气单胞菌AG2株弹性蛋白酶ahyB基因同源性为92%,与铜绿假单胞菌LasB基因同源性为82%;将PCR产物连入表达载体pET-32a,转化至大肠杆菌BL21菌株中进行诱导表达,出现50 ku的融合表达蛋白,该表达产物纯化复性后表现出酶的活性。 相似文献
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一株桑树内生拮抗细菌的分离鉴定及生物学特性研究 总被引：1，自引：1，他引：1
从健康桑树叶片中分离到一株内生拮抗细菌L144,该菌株对多种植物病原真菌及病原细菌均有较强的抑制作用。通过形态学观察、生理生化指标测定、16S rDNA碱基序列测定和同源性分析,鉴定该菌株为枯草芽孢杆菌,定名为Bacillus subtilisL144。该菌株已在GenBank注册,登录号为EU118756。对菌株部分生物学特性研究表明,其生长的最适pH值为6.5,最适生长温度为33℃,能广泛利用碳源,氮源。 相似文献
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The purpose of the present study was to investigate whether dietary antibiotic-induced changes in the fish intestinal microbiota altered host physiological responses to the infection with Aeromonas hydrophila in hybrid tilapia (Oreochromis niloticus ♀ × O. aureus ♂). After an 8-week induction period with an antibiotic-supplemented or antibiotic-non-supplemented diet, 160 hybrid tilapias in 16 tanks were each injected with phosphate buffered saline (PBS) or A. hydrophila at a dose of one-half of the LD(50). Then, all of the diets were changed to a prebiotic-supplemented one for the sequential 8-week response period. Parameters including production, gut microbial diversity and count, and non-specific immunity were determined at the end of the response period. Our results showed that A. hydrophila infection had no effects on the growth and diet conversion of tilapia, but it caused the decrease of the gut bacterial count, the number of visual bands, and the Shannon diversity and equitability indexes of gut bacteria in antibiotic-non-supplemented fish based on PCR-DGGE fingerprints. Infection with A. hydrophila reduced the gut bacterial evenness (lower Shannon equitability index), and slightly improved the gut bacterial richness (more visual bands) in antibiotic-supplemented tilapia. In addition, A. hydrophila infection affected non-specific immunity such as serum lysozyme activity and serum alternative complement pathway (C3 and C4) activities regardless of hybrid tilapia fed antibiotic-supplemented diets. These changes varied based on the intestinal microbial status of the fish before infection with A. hydrophila. 相似文献
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鸡GDF-5基因外显子1多态性与鸡骨骼发育性状的相关研究 总被引：1，自引：0，他引：1
根据GenBank发表的鸡GDF-5基因的mRNA序列设计引物，以白耳鸡和东北农业大学选育的肉鸡高、低腹脂系第8世代鸡群为试验材料，通过测序和PCR-SSCP的方法进行SNP检测和基因型分析，探讨GDF5基因多态性与鸡生长和骨骼发育性状之间的关系。结果发现在GDF-5基因外显子1的84bp处存在1个C／T的突变位点，对该突变位点在研究群体中进行基因型分析，结果产生3种基因型，AA型个体的基因序列和GenBank（Accession No：AF123389）中的一致为C，而BB型个体的基因序列在84bp处突变为T。基因型与鸡体组成性状的统计分析结果表明，AA基因型个体的跖骨围显著高于AB基因型个体（P〈0．05）；AA基因型和AB基因型个体的跖爪重和跖爪率显著高于BB基因型个体（P〈0．05）；AB基因型个体的股骨长和股骨重显著高于BB基因型个体（P＜0．05）；表明该基因对鸡的骨骼性状有较大的影响或与控制骨骼发育性状的主效基因相连锁。 相似文献
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猪血清白蛋白基因的克隆与序列分析 总被引：1，自引：0，他引：1
血清白蛋白融合技术是一种开发长效重组蛋白药物的新技术.为了获得猪血清白蛋白(PSA)基因,根据GenBank(登录号:AY663543)中PSA的基因序列,设计一对引物,采用RT-PCR从新鲜猪肝组织中扩增出PSA基因的全长cDNA,产物纯化后连接至pBS-T载体,转化大肠埃希菌TG1,采用PCR法及酶切鉴定法筛选出阳性菌株后进行测序.序列分析结果表明,成功克隆了PSA基因的1 821 bp全长cDNA,与 GenBank中参照基因序列同源性为99.6%,氨基酸序列同源性为99.5%.本研究数据已提交至GenBank,并申请到一个登录号EF202601. 相似文献
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根据已发表的嗜水气单胞菌Ⅲ型分泌系统（TTSS）的ascV基因保守区核苷酸序列设计合成1对引物,以国内疫苗菌株J-1的基因组为模板,通过PCR扩增得到331bp保守基因片段,将目的片段进行测序。在此基础上,分4段克隆J-1株的Ⅱscv基因并进一步拼接,全长为2166bp,同时PCR检测ascV基因在66株嗜水气单胞菌中的分布情况。测序分析发现,扩增出的J-1株ascV全长基因与嗜水气单胞菌AH-1、SSU、AH-3的同源性分别为97％、86％、86％,与杀鲑气单胞菌杀鲑亚种A449的同源性为86％,与温和气单胞菌的同源性为87％。PCR检测表明,64株能扩增出n5fV基因的目的片段,包括2株无毒菌株,而在2株有毒菌株中却未能检测到,说明TTSS在嗜水气单胞菌致病机制上的作用值得进一步探讨。 相似文献
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应用RT-PCR方法扩增了猪传染性胃肠炎病毒SC-Y株编码复制酶聚蛋白的ORF1序列,将其进行克隆、序列测定和分析。确认SC-Y株ORF1全长20 053 nt(GenBank收录号DQ390461)。该序列包含2个ORF,其中ORF1a由12 053个核苷酸构成,可编码由4 018个氨基酸组成的多肽,ORF1b由8 036个核苷酸构成,可编码由2 678个氨基酸组成的多肽。对SC-Y与TGEV参考毒株及不同冠状病毒对应区进行序列比较,结果显示,SC-Y株与PUR46-MAD株的同源性最高,ORF1a的核苷酸同源性为99.5%,推导氨基酸同源性为99.2%,ORF1b的核苷酸及推导氨基酸同源性均为99.8%;不同冠状病毒之间ORF1b比ORF1a具有更高的保守性。 相似文献
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Aeromonas hydrophila is a pathogen that causes disease in a wide range of homeothermic and poikilothermic hosts due to its multifactorial virulence. We have previously described the characterisation and use of an auxotrophic aroA mutant of the A. hydrophila AG2 strain as a live attenuated vaccine against A. hydrophila infections in rainbow trout (Oncorhynchus mykiss). In this study we report the expression of extracellular proteolytic activities and of quorum-sensing molecules by this mutant grown under different culture conditions, and in vaccine inocula. The aroA strain expresses extracellular proteases efficiently during in vitro growth and this ability is retained in vaccine inocula that were prepared by washing the bacterial cultures and resuspending the cells in phosphate-buffered saline. Since proteases are considered to be major bacterial antigens, the expression of these enzymes in the live attenuated vaccine may contribute to the superior protection afforded by these kind of vaccines. On the other hand, the production of serine- and metalloprotease activities in A. hydrophila has been described as controlled in a cell density-dependent fashion, through a mechanism known as quorum sensing. A microtiter method was developed that allowed correlation of the production of quorum-sensing molecules and of proteases produced by the aroA strain during in vitro growth and in the vaccine inocula. The production of both products was related to the type of culture medium and conditions used to grow the aroA mutant, whereas there was no correlation between the concentration of acyl homoserine lactones and protease production. 相似文献
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G F Browning R M Chalmers D R Snodgrass R M Batt C A Hart S E Ormarod D Leadon S J Stoneham P D Rossdale 《Equine veterinary journal》1991,23(6):405-409
A survey of 77 normal and 326 diarrhoeic foals in Britain and Ireland from 1987 to 1989 revealed a significantly higher prevalence of Group A rotaviruses and Aeromonas hydrophila in diarrhoeic foals. The prevalence of cryptosporidia, potentially pathogenic Escherichia coli, Yersinia enterocolitica and Clostridium perfringens was similar in normal or diarrhoeic foals. Rotaviruses had a similar prevalence in all age groups of scouring foals up to three months of age, with an overall prevalence of 37 per cent among diarrhoeic foals. The number of cases of diarrhoea varied considerably from year to year, but in all three years of the survey rotavirus was a significant pathogen. A comparison of diagnostic tests for rotavirus in the faeces showed electron microscopy (EM) and polyacrylamide gel electrophoresis (PAGE) to have similar sensitivity. The Rotazyme ELISA test kit was found to have the same sensitivity as a combination of EM and PAGE. A. hydrophila had an overall prevalence of 9 per cent among diarrhoeic foals, although its prevalence was higher in some age groups. A. hydrophila has not been established previously as a significant enteric pathogen in foals. Other putative pathogens found at very low prevalence were coronavirus, the putative picobirnavirus, Campylobacter spp. and Salmonella spp. No evidence was found of synergistic effects between rotavirus, cryptosporidia and potentially pathogenic E. coli. Neither coccidia nor non-Group A rotaviruses were found in any of the samples examined. 相似文献
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绵羊肺腺瘤病毒中国NM株gag基因3''''端951 bp段的分子克隆与序列分析 总被引：4，自引：1，他引：3
究参照Genebank中已发表的绵羊肺腺瘤病毒的全基因序列,设计合成一对引物,对JSRV中国NM株的gag基因3'端中主要编码核衣壳(NC)蛋白的基因段进行PCR扩增,产物经琼脂糖凝胶电泳分析,呈现一条约951 bp的特异条带,将其回收后克隆人pMD-18T载体中,并进行序列测定.结果表明,与南非代表株(基因序列号NC-001494)的gag基因序列比较,核苷酸同源性为95.4%,推导出的氨基酸同源性为95%.与美国代表株(基因序列号AF105220)的gag基因序列比较,核苷酸同源性为91.3%,氨基酸同源性为91%.这是我国首次报道的绵羊肺腺瘤病毒的gag基因的一段序列,为我国科研工作者进行更深入的研究奠定基础. 相似文献
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嗜温气单胞菌的鉴定及其外膜蛋白型研究 总被引：1，自引：0，他引：1
从病鳖、鳗鱼体内分离到2株嗜温气单胞菌(TAh-3、EAs-1),经形态学观察、生理生化特性等鉴定,确定TAh-3为嗜水气单胞菌,EAs-1为温和气单胞菌。动物感染试验结果表明,TAh-3株为致病性嗜水气单胞菌,对鲫鱼的致死率100%,EAs-1株为非致病性温和气单胞菌。SDS-PAGE电泳结果显示,TAh-3株外膜蛋白(OMPs)型由7条蛋白带组成,其中1条主带大小为40.0kDa;EAs-1株OMPs型由8条蛋白带组成,其中2条主带大小为38.0kDa、45.0kDa。 相似文献
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Aeromonas hydrophila is a broad-host-range pathogen and its pathogenesis is multifactorial. A regulatory mechanism known as quorum sensing has been found to be involved in the regulation of virulence in many bacteria. In A. hydrophila the ahyR gene encodes LuxR-type response regulator. Here we describe the inactivation of the ahyR gene of A. hydrophila J-1 by the insertion of a DNA fragment containing a kanamycin resistance determinant and reintroduced by allelic exchange into the chromosome of A. hydrophila J-1 by means of the suicide plasmid pJP5603. Cytotoxic effects on EPC cells assay and LD(50) determinations in fish demonstrated that the ahyR mutant was highly attenuated relative to the wild-type strain. Compared with the parent strain, some characteristics, such as biochemical characters and outer membrane protein profiles, had changed. Some main virulent determinants could not be detected, including proteases, amylase, Dnase, hemolysin and S layer. This article confirmed the important function of AhyR in the pathogenesis of A. hydrophila J-1. 相似文献
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为了解贵州省某养殖场罗曼粉鸡发病病原的特征及其耐药性,本试验从病死鸡中分离出一株革兰氏阴性菌,命名为GZ2019,并对其进行纯化培养、生化试验、16S rRNA序列分析、药敏试验及动物回归试验。分离菌在普通琼脂培养基上呈圆形凸起、表面光滑、半透明的灰白色小菌落,鲜血营养琼脂培养基上菌落形态与普通琼脂培养基上的一致,但不溶血;革兰氏染色结果镜检显示,分离菌为成双排列的阴性球杆菌,偶见单个存在或链状排列;生化试验结果显示,分离菌枸橼酸盐利用、过氧化氢酶反应为阳性,硝酸还原、氧化酶、葡萄糖发酵等反应为阴性,无运动性;16S rRNA序列分析结果显示,分离株与不动杆菌的核苷酸同源性在72.6%~99.9%之间,与申氏不动杆菌LUH 4760株（GenBank登录号：AJ275041）、SNSK 752株（GenBank登录号：MG584984）、MCDA01株（GenBank登录号：KY385627）及RP1株（GenBank登录号：MG461636）的核苷酸同源性高达99.9%;药敏试验结果显示,分离菌对头孢曲松和痢特灵敏感,对头孢哌酮、头孢呋辛、头孢他啶等5种药物中度敏感,对新霉素、环丙沙星、羧苄西林等17种药物耐药;动物回归试验结果显示,试验组小鼠隔离饲养1周仅死亡1只,死亡率为20%,表明该分离菌致病性较弱。本试验成功分离出1株低致病性申氏不动杆菌GZ2019,可为鸡源申氏不动杆菌病的预防和治疗提供一定的参考依据。 相似文献
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根据Gen Bank登录的猪流行性腹泻病毒（PEDV）毒株（登录号KJ960180）的M基因保守序列,设计1对扩增片段大小为299 bp的特异性引物,经PCR扩增、克隆、测序鉴定后,提取质粒作为阳性标准品,建立了PEDV的SYBR GreenⅠ荧光定量RT-PCR检测方法。该方法在1.21×10^3~1.21×10^8拷贝/μL范围内呈现良好的线性,相关系数（R2）为0.999,扩增效率为99%,扩增产物的熔解曲线为单个特异峰,产物Tm值为85.5~86℃,最低检测限为1.21×10^1拷贝/μL。本研究建立的SYBR GreenⅠ实时荧光定量RT-PCR检测方法特异性强、重复性好、成本低且操作简单,适用于PEDV的早期诊断、定量研究和流行病学监测。 相似文献