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1.
鹦鹉喙羽病(PBFD)是鹦鹉目前最常见的疾病,对鹦鹉养殖业危害极其严重。根据鹦鹉喙羽病毒(PBFDV)基因片段的克隆和序列分析,设计合成1对特异性引物,以CP基因为模板,经PCR扩增获得830 bp的核苷酸DNA,并用DIG标记DNA,制备用于检测PBFDV的特异性核酸探针。用该核酸探针对疑似感染PBFDV的鹦鹉病料进行斑点杂交检测,并对鉴定为阳性的PBFDV进行全基因组扩增和测序分析。结果显示,利用PCR结合斑点杂交技术检测PBFDV,特异性强、敏感度高,具有可重复性。鉴定为阳性的2株PBFDV全基因组序列之间同源性为100%,与已报道序列的同源性为81.5%～98.9%。本研究为我国开展PBFDV感染的分子流行病学调查和临床诊断提供了一种敏感、特异的检测方法。 相似文献
2.
根据GenBank中已经发表的B亚型禽偏肺病毒F基因的保守序列设计并合成1对引物,利用RT—PCR扩增出1条与目的片段大小一致的725bp基因片段,回收、纯化PCR产物,用地高辛标记,制备出地高辛标记的aMPV核酸探针。特异性检测结果表明,该探针能与aMPV核酸发生特异性杂交,而与H9N2亚型AIV、NDV、IBV、ORT和E．coil的核酸杂交反应均为阴性;敏感性检测结果表明,该探针对aMPV的最低检出量为5Pg。应用制备的探针对山东省不同地区的605份商品肉鸡和122份商品肉鸭进行了核酸探针检测,阳性检出率分别为36．59％和34．51％。本试验制备的aMPV地高辛探针特异性强、敏感性好,对样品的检测结果表明山东省部分地区的商品肉鸡、肉鸭中普遍存在aMPV感染。 相似文献
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建立了TaqMan实时荧光定量RT-PCR方法检测禽白血病病毒(ALV)。选取ALV病毒的LTR序列设计引物和探针,以梯度稀释的含有ALV目的扩增片段的质粒作为标准品,进行定量PCR反应以确定检测灵敏度。阳性标准品在3.0×102~3.0×107个拷贝共6个数量级的范围内,定量PCR反应有"S"型扩增曲线,检测灵敏度最低为30个拷贝。根据病毒拷贝数与定量反应Ct值的关系,绘制了标准曲线。该方法具有特异性,对新城疫病毒、禽流感病毒、传染性支气管炎病毒、传染性囊病病毒、鸡传染性贫血病毒和马立克病病毒核酸都没有扩增反应。实时定量PCR检测ALV的方法,灵敏度高,特异性好,可以进行定量分析,在禽病的快速检测上具有重要意义。 相似文献
4.
探针检测鸭黄病毒的地高辛标记DNA的制备与应用 总被引：1，自引：0，他引：1
利用RT-PCR方法扩增鸭黄病毒的NS3基因406bp的特异性片段,回收并纯化PCR产物,用地高辛标记,制备核酸探针。特异性试验结果表明,该探针仅与鸭黄病毒的核酸特异性杂交,而与鸭瘟病毒、H9N2禽流感病毒、新城疫病毒、传染性法氏囊病病毒、减蛋综合征病毒的核酸杂交均为阴性。敏感性试验表明,该探针对鸭黄病毒的RNA最低检出限量为100μg/L。对疑似黄病毒感染鸭的肝脏、肺脏、脾脏、输卵管、卵泡膜和泄殖腔棉拭子进行检测,以卵泡膜的检出率最高。该研究为鸭黄病毒感染的诊断和流行病学调查提供了一种可靠的方法。 相似文献
5.
禽白血病病毒斑点杂交检测方法的建立 总被引：3，自引：0，他引：3
为建立禽白血病病毒(ALV)斑点杂交检测方法,本研究采用RT-PCR技术扩增ALV群特异性p27抗原基因的部分片段,并以纯化的p27PCR产物为模板,合成地高辛标记探针,以此建立了ALV的斑点杂交检测方法。用该方法对4份疑似感染ALV的现地病鸡组织样品和18枚鸡胚进行检测,结果表明所有样品均为阳性,而且与PCR检测结果的符合率达到100%。该方法具有良好的特异性和敏感性,适应于ALV临床大规模检测。 相似文献
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7.
根据GenBank中已经发表的B亚型禽偏肺病毒（aMPV）F基因的保守序列设计并合成1对引物,利用RT—PCR可以扩增出1条725bp的片段,进行特异性试验和敏感性试验,建立了禽偏肺病毒病的RT—PCR检测方法。特异性试验表明,建立的RT—PCR检测方法能够从禽偏肺病毒疫苗毒株VIR115-B中扩增到725bp的特异性片段,而对H9N2亚型禽流感病毒、新城疫病毒、传染性支气管炎病毒的扩增结果均为阴性;敏感性试验表明,该方法最低检出量的cDNA质量浓度为1．45μg／L;对山东省492份病料进行检测,阳性检出率为43．09％（212／492）,随机挑取11份进行克隆测序及序列分析,结果显示所扩增到的阳性产物均为B亚型的禽偏肺病毒。建立的禽偏肺病毒的RT—PCR检测方法具有快速、准确、特异性强、敏感性高的特点。 相似文献
8.
为评价PCR结合斑点杂交技术在鸡REV检测中的应用价值,采用PCR法制备禽网状内皮细胞增生症病毒特异性地高辛标记DNA探针,同时用PCR技术、斑点杂交方法和PCR产物斑点杂交方法检测了不同地区的病、死鸡的组织样品REV的感染情况。结果表明,PCR产物斑点杂交法的检出率(45.16%,14/31)高于组织DNA直接斑点杂交法(32.26%,10/31),显著高于单纯PCR扩增法(0%,0/31)。PCR结合斑点杂交检测技术能快速、敏感、准确,充分避免PCR中的假阴性和假阳性现象,值得推广应用。 相似文献
9.
以地高辛(DIG)标记鸡传染性支气管炎病毒(IBV)pol基因的保守片段制成核酸探针,与IBV参考株、新城疫病毒、传染性法氏囊病病毒、禽流感病毒、正常鸡胚尿囊液及正常鸡肾组织等的RT-PCR产物进行斑点杂交,以检测探针的特异性,结果该探针仅与IBV毒株的RT-PCR产物杂交呈阳性,与对照病毒和组织的RT-PCR产物杂交呈阴性.敏感性试验显示,探针最低能检出约3.4pg的IBV RT-PCR产物.用该方法检测了38份疑似IBV临床病料,31份阳性;而用RT-PCR法扩增IBV S2基因确诊为阳性的只有29份.对人工接种IBV H52弱毒苗鸡咽喉和肛门拭子32份进行检测,检出15份阳性.结果表明,利用DIG探针检测IBV的RT-PCR产物,特异性和敏感性强,可重复,能克服RT-PCR非特异性反应和探针Northern杂交的不稳定性. 相似文献
10.
用地高辛标记的核酸探针检测猪伪狂犬病毒野毒感染的研究 总被引：2，自引：0，他引：2
利用PCR技术从带有伪狂犬病毒（PRV）gE基因的重组质粒pMD18-T-gE中扩增回收约304bp大小的片段,并制备出地高辛标记的gE基因核酸探针。特异性检测结果表明,该探针能与重组质粒DNA发生特异性杂交,而与对照的PRVBartha-k61株疫苗毒DNA、猪细小病毒（PPV）DNA、猪圆环病毒（PCV）DNA、猪繁殖与呼吸综合征病毒（PRRsV）cDNA、猪瘟病毒（CSFV）cDNA的杂交反应均为阴性;敏感性检测结果表明,该探针对PRV野毒的最低检出量为4pg。应用该探针对11份繁殖障碍病料进行了杂交检测,共检出4份阳性病料,该结果与PCR检测结果一致,表明该核酸探针可用于猪伪狂犬病野毒感染的临床诊断。 相似文献
11.
FENG Bin XIE Zhi-xun ZHANG Yan-fang HUANG Jiao-ling WANG Sheng FAN Qing HUANG Li XIE Li-ji ZENG Ting-ting LUO Si-si DENG Xian-wen XIE Zhi-qin LIU Jia-bo SONG Zhong-bao LIN Er-ke 《中国畜牧兽医》2017,44(5):1295-1301
In order to set up and optimize a semi-nested PCR for rapid detection of chicken parvovirus (ChPV), three specific primers were designed according to conserved sequences of NS 1 gene of ChPV. The specificity and sensitivity of ChPV semi-nested PCR were tested, and the assay was applied to detect 48 clinical samples. The specificity and sensitivity tests showed that this semi-nested PCR was only sensitive to ChPV for amplifying specific band of 186 bp and it could detect 5.62 fg/μL of ChPV DNA, without any sensitivity to other viruses, such as Newcastle disease virus, H9 subtype avian influenza virus, Marek's disease virus, infectious laryngotracheitis virus and infectious bronchitis virus. 48 chicken samples were detected and the positive rate was 16.67% (8/48). The results of our study demonstrated that the optimized semi-nested PCR could be a method that was suitable for clinical detection of ChPV. 相似文献
12.
为建立一种快速、特异、灵敏的检测鸡细小病毒（chicken parvovirus,ChPV）的方法,根据ChPV的保守基因NS1设计了3条特异性引物,建立并优化了能快速检测ChPV的半巢式PCR方法,对其进行特异性和敏感性试验,并用所建立的方法对48份临床样品进行了检测。特异性和敏感性试验结果显示,建立的半巢式PCR只对ChPV敏感,扩增产物为186 bp的特异性条带;其最低能检测到5.62 fg/μL的ChPV DNA;而对鸡新城疫病毒、H9亚型禽流感病毒、马立克氏病病毒、鸡传染性喉气管炎病毒、鸡传染性支气管炎病毒不敏感。临床检测结果显示,同时对48份临床样品进行检测,检出率为16.67%（8/48）,提示广西区内鸡群存在ChPV感染。本研究建立的ChPV半巢式PCR方法适用于ChPV的临床检测。 相似文献
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为建立一种快速检测1型、2型牛病毒性腹泻病毒(BVDV)的通用RT-PCR方法,根据GenBank上收录的64株1型、2型BVDV以及1株猪瘟病毒(CSFV)的全基因组序列,应用Primer 6.0软件设计针对5'-UTR区域的1型、2型BVDV特异性通用引物对,扩增目的片段,并对该方法进行特异性、敏感性、重复性试验及利用该方法开展临床样品检测。结果显示:扩增的目的片段长度约为302 bp;该方法的灵敏度为2.09×102 copies/μL,无非特异性扩增,且重复性良好。对采自山东省发病牛场的13份鼻腔棉拭子和9份牛血清临床样品进行检测,发现有8份鼻腔棉拭子和8份血清为BVDV阳性,随机抽取4份阳性样品送测序,发现3份样品毒株为1型BVDV,1份样品还需进一步鉴定。本研究建立的RT-PCR方法可实现对1型、2型BVDV核酸的特异性检测,也可用于该病的流行病学调查研究。 相似文献
15.
为建立一种能同时鉴别诊断禽流感病毒（avian influenza virus,AIV）和鸡细小病毒（chicken parvovirus,ChPV）的检测方法,本研究根据GenBank中AIV的M基因和ChPV的NS基因保守序列,分别设计并筛选出两对特异性引物,用于AIV和ChPV的检测。通过优化反应条件,建立了AIV和ChPV二重PCR检测方法。试验结果表明,该方法特异好,能同时检测AIV和ChPV,对其他常见的禽病病原体均未反应;该法对AIV和ChPV的检测下限均为100 fg;对159份临床样品检测结果与PCR阳性产物测序结果一致。本研究建立的AIV和ChPV二重PCR检测方法具有特异性好、灵敏度高的特点,对AIV和ChPV的防制具有重要意义。 相似文献
16.
HE Ying XIE Zhi-xun LUO Si-si LI Meng XIE Li-ji DENG Xian-wen XIE Zhi-qin FENG Bin HUANG Jiao-ling ZHANG Yan-fang 《中国畜牧兽医》2017,44(7):2126-2131
In order to establish a method to simultaneously detect avian influenza virus (AIV) and chicken parvovirus (ChPV),two pairs of specific primers were designed according to the sequences of AIV M gene and ChPV NS gene in GenBank. The duplex PCR assay was established by optimizing the reaction conditions.The tests showed that this method had high specificity, could simultaneously detect AIV and ChPV and no specific band was amplified for other subtypes avian pathogenic virus. The sensitivity result showed that the lower detection limit of this method was 100 fg. The results of 159 clinical samples were consistent with the sequencing results of PCR positive product. The double PCR methods for detection of AIV and ChPV established in this study had the characteristics of good specificity and high sensitivity, which was of great significance to the prevention control of AIV and ChPV. 相似文献
17.
以鸡毒支原体pvpA基因序列建立的套式PCR检测方法 总被引：1，自引：1，他引：0
本试验以GenBank中登录的鸡毒支原体(Mycoplasma gallisepticum,MG)的特异性黏附蛋白pvpA基因序列为目标,用两对引物对鸡毒支原体DNA进行套式PCR扩增,建立套式PCR扩增体系,并进行了套式PCR的敏感性和特异性试验。结果显示,应用该PCR方法对MG DNA的检出限为0.18 pg/μL;以鸡常见细菌、病毒DNA为模板进行PCR扩增,均未扩增出条带,说明该方法特异性强,适用于临床对MG早期感染的检测。 相似文献
18.
Mattia Cecchinato Elena Catelli Carol E Savage Richard C Jones Clive J Naylor 《Journal of veterinary diagnostic investigation》2004,16(6):582-585
This study describes attempts to increase and measure sensitivity of molecular tests to detect avian pneumovirus (APV). Polymerase chain reaction (PCR) diagnostic tests were designed for the detection of nucleic acid from an A-type APV genome. The objective was selection of PCR oligonucleotide combinations, which would provide the greatest test sensitivity and thereby enable optimal detection when used for later testing of field materials. Relative and absolute test sensitivities could be determined because of laboratory access to known quantities of purified full-length DNA copies of APV genome derived from the same A-type virus. Four new nested PCR tests were designed in the fusion (F) protein (2 tests), small hydrophobic (SH) protein (1 test), and nucleocapsid (N) protein (1 test) genes and compared with an established test in the attachment (G) protein gene. Known amounts of full-length APV genome were serially diluted 10-fold, and these dilutions were used as templates for the different tests. Sensitivities were found to differ between the tests, the most sensitive being the established G test, which proved able to detect 6,000 copies of the G gene. The G test contained predominantly pyrimidine residues at its 3' termini, and because of this, oligonucleotides for the most sensitive F test were modified to incorporate the same residue types at their 3' termini. This was found to increase sensitivity, so that after full 3' pyrimidine substitutions, the F test became able to detect 600 copies of the F gene. 相似文献
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根据GPV H1株核苷酸序列，设计了扩增VP1-VP3基因非重叠序列的1对引物，对其结构蛋白VP1与VP3非重叠核苷酸序列进行PCR扩增，将PCR产物纯化、回收后制备出GPV VP1-VP3基因DIG标记核酸探针，其标记效率达到0．1pg／μl。特异性检测结果表明，该探针能与GPV不同毒株核酸发生特异性杂交，而与对照的DPV、GPMV等病毒的核酸杂交反应均为阴性；敏感性检测结果表明该探针对GPV的最低检出量为0．032ng。上述试验结果表明该探针可以用于GPV感染临床病料的检测。 相似文献
20.
WANG Shu-juan LIU Mei-fen YAN Ruo-qian BAN Fu-guo ZHAO Xue-li MA Zhen-yuan WANG Hua-jun WANG Cui ZHAO Ming-jun 《中国畜牧兽医》2017,44(7):2112-2118
A Real-time quantitative PCR assay for detection of classical swine fever virus (CSFV) was developed using the specific probe and primers designed basing on the E2 gene of CSFV. The Real-time quantitative PCR assay was established using the total RNA of CSFV as template. The specificity, sensitivity and repeatability of the assay were tested, and samples taken from clinic suspicious CSFV infected pigs had been testified by the established assay. The results indicated that the Real-time quantitative PCR assay was successfully established, and showed a good linear relationship at a template range of 101 to 106 copies/μL with a coefficient correlation of 0.999; The specificity of the assay revealed that amplifications were showed on CSFV samples, but other pathogens had no amplifications; The sensitivity of the assay was 10 copies/μL nucleic acid and 1 TCID50/mL virus; Meanwhile,19 positive samples were detected, which were consistent with results of CSFV detected by Nested RT-PCR, cloning and sequencing. The eatablished Real-time quantitative PCR assay was specific, sensitive rapid and suitable for early detection and epidemiological study of CSFV. 相似文献